Strongylocentrotus purpuratus (purple sea urchin): 574824
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Entry
574824 CDS
T01019
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spu04121
]
574824
Ubiquitin system [BR:
spu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
574824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
574824
NCBI-ProteinID:
XP_030835559
UniProt:
A0A7M7SW46
LinkDB
All DBs
Position
Unknown
AA seq
2002 aa
AA seq
DB search
MDFIYDWDDQGDQFSFEDSDRFEEDSLCSWVSEAESVCNNNWRGWKKNSNGTGGGERMSS
AVPAAPGISSSLTEVSSLVELTAKTTALYIPFEVVERVYPPVPENLQLRIAFWSFPENEE
DIRLYSCLANGSPDEFQRGEHMVRNKAVKDVLQIGFHLSGTVVPSHPMTQQHGTSATFNV
AITFDRRRISSCSCTCSSASKWCSHVVALCLYRIHHPSSVCLRAPVSESLSRLHREQLQK
FAQYLISEFPRLILPTAQRLLDELLLSQGSAINKVCGAPDPTAGPPATEMTHWFLDEAIL
HENIKKTLIRFSGPSPIVFSDVNSLYLSSTAPQAAAEWTNLLRPLRGRMPEGIWNLLSIV
REMYRRRDSNAISLLRILTEECIICDQIVIWWFTTRTSALHSQHGNHGHRASSNSSTAAA
QHACASMCEEIVTLWRLAALNPINSRQDRVNHEQEFRKWHLQVIEKARKARGPSHWVGAG
GTGGNNNNLRKVDIEVFAGFKPAIEACMLDWSDFPIEGVTHRETRIPRVKVGQGGEGNSQ
ISGSGHHVKMPESSTTGGPTCRSSPEQGKQEVNVVVSSSPQAETPGSKEDKVKVESDSET
LLRANSSDSSMSSSSDRVEGYQTGASLSHSDDTDSDVQTVSNFASKQASDGKHLQPHGAE
IKDTGSQGSNSPREGATAGDKHSGKRKTKSKHVDRGDSDLTDSEAGLVAEPLRREQESDS
SNEARAGRKQALQVEQRESRESQPSSDEYQMYYYDTRQAKAAEPTPPKKKNDTPNPFVGI
KKMEDRIEMEMILSSLQIMFSRAEALHAHGYTRNACKLAIQLAEEMLDKPPVLDAPPPTG
LSNRARKKHVHSQSVLTSMTLSKAAFLCSVLSEQAECHHLAFRMGMFGLELPRQPASTKA
LEVKLNSQETDLVTLLKRIPLGPSELGMIRERAQKLREGTLRSRGEALLPIMLASFIFDA
LCLPGQPAANLPRTSVRLALVRERSPNDEKMGFEAAVAAMAMKANVSEADHPLLCEGTRR
QRGDLALAMLSHYKEDQGKFRQILDALLDKQGPKTHKTPCAAPVPSNPALSRPSQQVPTH
GHAHNHTHPHGHMPHPQTTTGDDIAARIAQHMSERSLAGAPPSQPAGMKPQDAKRGKGGG
KDGHDSCEGGSDSSRSKDKKSKSRLEAPGPRPVPSGPPPSNSNLDPAMCRVGQPGMGQVG
GGRGRGEFPTISGEDEGSHHPPPHGPPGAANHPSTTTGIGYWGRIFGRHPRKSKGMASID
SSAPETTSSDNSPTLARRVPPGGWGRYHGPGSDSGSSGNSSDSVSSSSSGERATGARPKL
REAEPSPGQSIPVSLMRANPVSIAVAPENLNENKACIAAGKANRRGRKGGRNDNCPTVPN
QPSEASAHFFFELAKTVLNRAGGSSSTALFTQECTNSNHSGPHRGLHLCAFEIGLYALRL
HNAVTPNWLSRTYSSHVSWITGQAMEIGSAAINLLVETWEGHLTPTEAASLADRASRGRD
PNMVRAAAQLALSCLSHAHALNPTDVNRALMQCKEQDIMMLQKACVAVESAAKGGDVYPE
VLFNVAKQWEWLHDNSTGQGNHSNQRHQHHHHQHHDSDEDKVVAADEGTGEEIGPVVPFV
NAPVRGIVPQQRVVGLPYRLAQPHAVPIVYHHPEYQEYVAVDPYMARHQFGNAPHAMPVG
DHRLQHRPPMPQDAHNMQWLPHHQYHGPCPYNANVAMPGMAVSVPRTAFQPTQIMQLPPG
QVMAQRPIIQYPMPPTIIHARPNVMPQQQQQQQQQQQQQQHPMQPIPNMAQPIAPQQHPG
LFYLHATYRVGMLGIDTLARRVHDERTQSRFSPNPPYGEDIKWLMEIAKRLGVSYVQQFC
ACVLSVVVSPFVLHTITWEAAHYLASMNHTSVQANLRSPILSPIVQKCVQMYIQCIHQRM
YHITPPEYDDFISVVQSAQKAFSMQAGGQAQFKDFIQSLRRLPRCKHDLWVRLSATLSPS
LFEHSSSSSASSPSTTTVSTNH
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atggattttatatatgattgggatgatcaaggagaccagttttcattcgaggacagtgat
cggttcgaggaagattcgctatgctcttgggtgagcgaggcagagagtgtgtgtaacaac
aactggagaggatggaagaaaaacagcaatggaactggagggggagagagaatgtcgtct
gctgtccctgcagccccagggatttcttcgtctttaacagaggtttcctcattggttgaa
ctgacagcaaagaccaccgccctctacatcccctttgaagtcgttgaacgagtctaccca
ccggttcctgaaaaccttcagctccgcatcgctttctggagctttcccgagaatgaagag
gatatcagactgtattcctgcctggctaatggtagccctgatgagttccagagaggagaa
cacatggtcaggaacaaagcggtcaaagatgttcttcaaattggatttcacctgagtggg
acagtagtgccctcccatcccatgacccagcagcacggcaccagtgcgaccttcaacgtc
gccatcaccttcgaccgacgtcgcatctcctcctgcagctgtacgtgcagctcggccagc
aagtggtgcagtcacgtggtggcgctgtgtctctaccgcatccaccatccgtcgtccgtc
tgcctgcgcgcccccgtgtcggagtccctttcccgcttgcacagagaacagcttcagaag
ttcgctcagtatctcattagtgaatttccccgtttgatcctccccactgcacagcggctc
ctggacgagttgctcttgtcccaaggcagtgccatcaacaaggtgtgtggtgcccctgac
cctaccgccggacccccagccaccgagatgacccactggttcttagatgaagccatcctt
catgagaacatcaagaagaccctcatcagattcagcggtccttctcccatcgtctttagt
gatgtgaactccctgtacctgtcctcaacggcgccccaagcagctgccgaatggaccaac
ctgctacgacccctgagggggcggatgcctgagggcatctggaacctgctctccatcgtc
agggagatgtaccgtcgccgtgacagcaatgccatctcactgcttcgtatcctaacggag
gagtgtatcatctgtgatcagattgtgatttggtggttcaccactcgtacctcagccctc
cactcacagcatggaaaccatggacaccgggcaagtagcaatagcagcacagcagcagct
caacacgcctgtgctagcatgtgtgaggagatcgttactctgtggcgactagccgcgctc
aaccccatcaactcacgccaagaccgcgtcaaccacgagcaagagttccgcaagtggcac
ctgcaggtcatcgagaaggcgcgtaaagctcggggaccgtcgcattgggtaggggctggc
ggcacgggtggaaacaataacaatcttcgtaaagttgacatcgaggtctttgcagggttc
aagcccgccatcgaggcttgcatgttggactggagtgatttccccatagagggcgtcacg
cacagagagacacgcatccctcgggttaaggtaggccaaggtggcgaggggaacagtcaa
atctcagggagtggccaccacgtgaaaatgccggaatcttccacgacggggggcccgacc
tgtcgatcaagtccagagcaaggcaaacaggaggtgaacgtagttgtaagtagtagtccc
caagcggaaacaccaggatccaaggaggacaaggtcaaggtcgagtccgacagtgagact
ctcctgcgtgccaactcttcagattcttccatgtcttcatcaagcgacagggtcgaaggt
taccagacaggagccagcttatcacactccgacgacacagactctgatgtgcagactgtc
tcgaactttgcctccaagcaggcatcggacggcaaacatcttcaaccgcatggagcagaa
atcaaagacacgggtagtcagggttcaaattcacctcgcgagggtgccactgctggggat
aaacacagcgggaagcgcaagacgaagagcaagcatgtagacagaggagattctgactta
acggacagtgaagctggtctggtggctgaaccactccggagagagcaggagagcgactcc
tcaaacgaagcaagggcggggcggaagcaagctttgcaggtggaacagagagagtcccgt
gagtcgcagccctctagtgatgaatatcagatgtattactatgacaccaggcaggccaag
gcggccgagccgaccccacccaagaagaagaatgacacacccaacccctttgttgggatc
aagaagatggaagataggatagagatggaaatgattctctcgtctcttcagatcatgttt
tcaagagctgaagcattgcatgcccatggttacaccaggaatgcttgtaaactagccatt
cagctggctgaagagatgctggacaaaccaccggtcctagatgccccgcctcctactgga
ctttcaaacagagcaagaaagaagcacgtccattcccagagtgtcctgaccagcatgacg
ctatccaaggcagcgtttctctgcagcgttctctcggagcaggcagagtgtcatcatctc
gctttcaggatgggcatgttcggcttggagttgccaaggcaacctgcatctaccaaagca
ctagaggtgaagctgaatagccaggagacagacttggtgaccttactgaagaggataccc
ctcgggccctctgagctgggtatgatcagagagagggcccagaagctgagggagggtacc
ctacgctccaggggagaggctcttctgcccatcatgctcgctagcttcatctttgatgcg
ctctgcttaccaggccagccagctgcgaacctaccccgcacgtcagtccgtctggccctc
gtcagggagcgtagccccaacgacgagaagatgggctttgaggcggcggtggctgccatg
gcgatgaaagccaacgtgagcgaggcggaccatcctctgctgtgcgagggtacaaggaga
cagagaggagacctggcgctggccatgctctcccattacaaggaagaccaaggcaaattc
agacagatcctagatgccctccttgacaagcaaggtcccaaaacccacaagacaccatgt
gcagcccctgtcccctccaacccagcgttatctagaccatcccaacaggttcccactcat
ggccacgcccacaaccacacccaccctcacggtcacatgccccacccgcaaactaccacc
ggggacgacatagcggcccgtatcgcccaacacatgagtgagcgctccctggcaggtgcg
cctcccagccaaccagcagggatgaaacctcaggacgcgaagcggggtaaaggtgggggt
aaggacggccatgatagctgcgagggcgggtccgacagcagcagaagcaaggacaagaaa
tccaaatccagactagaggctccgggaccacgccctgttccctccggaccacctcccagc
aactccaaccttgatcctgccatgtgcagggtgggtcaacctggtatgggacaggttggt
ggagggaggggtagaggggaattccccaccatcagtggagaggatgagggtagccatcac
ccccctccccacgggcctccaggtgcagccaaccacccctcgacaaccactggtatcggc
tactggggaaggatattcggcagacaccctaggaaaagtaaaggtatggctagtatagac
agcagtgcacctgagacaacctccagcgacaattcccccaccctagcgaggcgagtaccc
ccaggggggtggggaaggtaccatggacctggtagcgacagcgggagtagcggtaactcc
agcgattcggtcagctccagcagttcaggggagagagcaaccggcgctaggccgaagcta
cgggaggctgaaccaagtccagggcaaagtatacctgtgtcgctaatgcgtgctaaccca
gtcagcatagccgtagcacctgagaacctgaatgagaacaaggcttgtatagcggcaggc
aaagctaacagaaggggtcgtaaaggaggtcgtaacgacaactgcccgacagtccccaac
cagcccagcgaggcctctgcccacttcttcttcgagctggccaagacagttctgaacagg
gcgggcggttcaagcagcacggcgctcttcacccaggagtgtaccaactccaaccactcc
gggccccaccgaggccttcatctgtgcgcgtttgagataggactgtacgcgctgagactt
cacaatgcggtcacacccaactggctctccaggacgtattcttctcatgtttcctggatt
acaggccaagcaatggagatcggaagcgcagccatcaacctgctggtggagacatgggag
gggcaccttacacctacagaagccgcctcattggctgacagggcctccagaggtcgtgac
cccaacatggtgcgagcagcagcccaactggctctgtcttgtcttagccacgcccacgct
ctgaacccaacagatgtgaacagggcactcatgcagtgcaaggagcaagacatcatgatg
ttacagaaggcatgtgttgctgtggagagtgcggccaagggtggagacgtctacccagaa
gtcctgttcaacgtcgccaagcaatgggagtggcttcatgacaactccactggacaaggt
aaccatagcaaccaaaggcaccagcaccaccaccatcagcaccatgactctgacgaagac
aaggtggtagcggccgacgaggggaccggagaagagatcggacctgtggtgccgtttgtg
aacgcgcctgtcaggggtattgttccacagcaacgcgtggttggtcttccgtacaggttg
gctcagcctcatgcggtacctatcgtgtaccatcatcccgagtaccaggagtatgttgcc
gttgatccctacatggcaaggcatcaatttggcaacgcacctcacgcgatgccggtcgga
gaccacaggctgcagcatcggcctccgatgccccaagatgcccacaacatgcagtggctt
cctcaccaccagtaccacggtccgtgtccctacaacgccaacgtggccatgcctgggatg
gccgtgtccgtaccccgcacggccttccagcccacgcagatcatgcagcttccgcctgga
caggtcatggctcagcgacccatcatccagtacccgatgcccccgacgatcatccatgcc
aggcccaacgtgatgcctcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cacccgatgcaacccatccccaacatggcccaacccatagccccacagcagcatccagga
ctgttctatcttcatgccacctacagggttggcatgttgggtatcgataccctggctagg
agagttcacgacgagaggacacagtcaaggttctcacccaatcctccgtacggtgaagac
atcaagtggctcatggagattgctaaaagattaggtgtaagttatgttcaacagttctgt
gcatgtgtactaagcgtcgtagtgagtccgtttgttctacatacaataacatgggaggct
gcgcattacctggcgtctatgaaccacacatcggtgcaggccaatctacgctcccccatc
ctgagtccgatcgtacagaagtgtgtccagatgtacatacagtgtatccatcaaaggatg
tatcacatcacgccaccggagtacgatgacttcatcagcgtggtccagagtgcacagaag
gccttctcgatgcaggcaggtgggcaggcacagttcaaggacttcatccagtccctcaga
aggttgcctcgatgcaagcatgacctgtgggtgcgactgtcagccacgctgtcgccaagc
ctctttgagcattcctcttcctcctccgcttcctctccttccaccactactgtctcgacc
aatcactga
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