KEGG   Strongylocentrotus purpuratus (purple sea urchin): 574854
Entry
574854            CDS       T01019                                 
Name
(RefSeq) roquin-1 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:spu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:spu03000]
    574854
   04121 Ubiquitin system [BR:spu04121]
    574854
Transcription factors [BR:spu03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    574854
Ubiquitin system [BR:spu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    574854
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-CCCH_4 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf_CCCH_4 zf-C3HC4 zf-RING_4
Other DBs
NCBI-GeneID: 574854
NCBI-ProteinID: XP_011662686
UniProt: A0A7M7HCE2
LinkDB
Position
Unknown
AA seq 1521 aa
MPVQTPQWTEVLSCPVCCKDFSPSGRQPVSLSCGHTACRMCLSKLHRQQCPFDQTPISKD
VDKLPTNFAILQLVAGQEVMRDPSRKRIPDGLKPAEFENYQTTQGIIEELALYLKALNKP
SSGSLNGTLNGNSGSPLLSRPIQRKLVTLVNCQLIEGEGRARVVRAARSLGERIVTELII
QHQNPQQLSTNLWAAVRARGCQFLGPAMQEETLKLVLLALEDGTPLSRKVLVMFVVQKLE
MQFPQASKTSVGHVVQLLYRASCFKVTKREEESSLMQLKEEFRNYDSLRREHDTQIVQIA
IEAGLRISPEQWSSLLYGDLNHKSHMQSIIDKLQTPASFTSSIQELTICLQRSGDPVRLA
QLHAQLEKLAAIDPSPGAMISSWEGILSALDSVRKVLKGLMEFLQNYSQNKKALDLQTQN
IKYKTSLCRDVMQKGGCPRGPSCTFAHSEEELEKYRSKSRQLLSSLNSQNKNSNVSRGDG
SLLSEGNNETSTQSMPGSSNGKPPRDQPIYSLEECSAAARLGSESLYSSVSGLFSDQQER
STGSAAMGYKSESGRIHRPPLSAFSQLASSERNEDELRLDEDIQASLYGLRDRNEQSMTT
RKELSSPTPGLPPHLEYPNILPSSNTKMYLASRSLSMNASEPSVGREDSERTSSVGGGRV
MHHEAKGRRPGPDIDRYALPPEEGYFYERRMPSNEAPAAYGGQGPSPHPPPQPHILVPTM
PPQPQGDPYDRKPDKHPYPYHAPSGGGYLYPESQVMPQTPPPEPPRQYRRPVVQRYVDPH
TMKAYDVVPVDDYVEPSAPPPSLLPSQRYKPQPMYHGEPDFYPPYDQRGHRITDMRHLPP
VGTPQGNPSHLIPDDSSKRPEMKGGKLPSHKVAVSPPKPKPPLRLERGPSLTELKERQTY
LVTRLDEIQDDTDTKDDEPVTSTPWSRPATSSSTNPPTSLWAHMADTQPSWTTSSSRALS
DSLWGTSTESKEAISSTGLSFSFTGIEDEEEEEDIDHRKNGIDVDAEEEIETSKFTDDDE
TTDQADRSDSEVGSYNPWTSTSLFMPNTGKAVKETATNYTMTYSKVLVRHVSANEDDPSQ
RTPHGSHQMGDYEKMSMHELERTLKEVGQQDQRAGSSHFERGHKIQIEMGRREEDGPTPS
PHFSSNSVPLPAQLVSKEPILHMYTKYPHAGALAASYGPVSGSARALGSNTGPLKVSAGM
VENTMPVNMTQQDCQVAPGFQTPEGDGYYIKTPKAPSAELEATILKDDWETTVEKLVECD
PQAQEKLKQALSQVRTRIQAKETAKHAHNTFIIDFEEKILENMNCEKDHRPVVDCSHGDC
SHGGNHVTHQVKPPQQNVSVQQPESRAVQMQESGLSRYARQPDPHHVRQPDPHPRDPRDP
RDSHWMPQRGGSPGHAPGYQYVEPHPHMDGYTSPKTPYPRLVPAGSRQTRYGPPPPGPAS
HVQVERQGIHASKRQMEAADLQYAKQVQDKEREEYLRHLEDVQRRHDQMDRMEQQKRTQE
ERDRKIARELAMREAMYNNYP
NT seq 4566 nt   +upstreamnt  +downstreamnt
atgcctgtccagaccccgcaatggacggaggtcctctcttgtcccgtgtgctgcaaggac
ttcagcccgagcggccgtcagccagtcagtctgtcgtgcggtcacacagcctgcagaatg
tgtctcagcaagctgcatcgtcaacagtgcccgttcgatcagactcccatttccaaggat
gtggacaagcttcctacaaactttgccattcttcagctcgtggctggtcaggaagtgatg
agagatccgtcaaggaagcggattccagatggcctgaagcctgctgagtttgaaaactat
cagactacacagggcatcattgaagaattggctctctatctaaaggctcttaacaaacca
tcttccggtagcctgaatggaaccctgaacggtaacagtggctcgcccctcctcagccgt
ccgatccagcgtaaactagtcaccctggtcaattgtcagctgattgagggagaaggcagg
gccagggtggttcgggcagcccgatctctgggggagaggatcgttacagaactgatcatt
cagcatcagaacccgcagcagctctctaccaacctgtgggctgcagtgcgagccagaggc
tgccagtttcttggacctgccatgcaggaggaaactctgaagcttgttctgctggcgctg
gaggacgggacacctctctctcgcaaggtcctggtcatgttcgtggtccagaagcttgag
atgcagttccctcaggcctccaagacgagcgtaggtcacgtggttcagctcctctaccga
gcgtcctgttttaaggtcaccaagcgggaagaggagtcctctctcatgcaactcaaagaa
gagttccgcaactacgattccctgagacgcgagcacgacacgcagattgttcagatagcc
atcgaggccggcttgaggatatcaccggaacagtggtcgtccctgctgtacggtgatctc
aatcataaatctcacatgcagtccatcattgacaagctccagactccagcctccttcacc
tccagtatccaggagttgaccatttgtctccagcgctccggagatccagtccgcttggcc
cagctccacgctcagctggagaaactggcagccattgacccaagtccaggagcaatgatc
tcctcctgggaaggcatcctgtctgctttagactctgtcaggaaggtcctcaaggggctg
atggagttcctccagaactactcccagaacaagaaagccctggatctccagacccagaac
atcaagtacaagaccagtctgtgtcgggacgtcatgcagaagggaggctgccctcggggg
ccaagctgcacgttcgcgcactcggaggaagagctggaaaagtaccgttcaaaaagccgt
caactcctgtcctcgctgaacagtcagaacaagaattcaaacgtttcacgcggagatggc
tccttattaagcgagggtaataatgagacatctacccagtccatgcctggcagttcaaac
ggcaagccaccaagggaccaacccatatacagcctggaggaatgctccgctgccgccagg
ctggggagcgagtctctctacagcagcgtgtcggggctgttctctgatcagcaggaacgc
agcactggctcggctgccatgggctataaatctgaatcgggccggatccacaggccccct
ctcagtgcattctctcagctggcttcctcagagagaaatgaggatgagctacgtttggat
gaagatattcaagcttctctctatggactcagggatcgtaacgagcagtcaatgactacc
aggaaggagttgagtagccccactcctgggctgccaccccacctggagtaccccaatatc
ttaccgagcagtaacaccaagatgtacctagccagtcgtagcctgagcatgaatgctagc
gaaccatcggtgggcagagaggactcggagaggacgtccagtgtgggcgggggcagggtg
atgcaccatgaagccaaggggcgaaggccagggccggatatcgacagatacgctctaccg
cctgaagaagggtacttttatgagaggaggatgccatccaatgaagctcctgccgcctat
ggtggccaggggccttcacctcatccaccaccccaaccccacatcctggtgcccaccatg
ccgccgcaaccccaaggcgacccctatgaccgcaagccggacaagcacccttacccctac
cacgccccctccggtggtggttacctgtaccctgagtcccaggtgatgccccagactcca
ccgccggagccgccgaggcagtaccgcagaccggtggtgcagcgctacgttgatcctcac
accatgaaggcgtatgatgtggtgcctgtggatgactatgttgagccctcagctccgccc
ccatcgttgttgccgagccagaggtacaagccacaacccatgtatcatggggagccagac
ttctaccctccgtacgaccagcgagggcacaggatcactgacatgagacatttaccaccg
gtaggcacaccacaggggaaccccagccacctcatcccggatgatagctccaagcgaccg
gagatgaaggggggtaaattaccaagccacaaggttgcagtctcaccacccaaaccaaag
cctcctcttagattggaaagaggcccgagcctgacagagttgaaggaacgtcagacctac
ctggtgaccaggctggatgagatccaggatgataccgacaccaaggatgatgagcctgtc
acctccaccccatggagtaggcccgccacctccagctccaccaatccccccaccagcctg
tgggctcatatggctgatacccagccatcatggacaacgtccagcagtagagccctgtca
gatagcctctggggaacgtccactgaatcaaaggaagccatatcatcaacaggccttagc
tttagtttcacaggcattgaagacgaggaggaggaggaggacatcgaccaccggaagaat
ggtatcgatgttgatgcagaggaggagatagagacttccaagtttacggatgacgatgag
actactgatcaggcggataggtcggacagtgaagtaggaagctataatccttggacgagc
acgtctctgttcatgcctaacacggggaaagcggttaaagagacggcgaccaactacacg
atgacttacagcaaggtgttggtccgtcatgtctcggccaacgaggacgacccgtcgcag
aggacacctcatggctcgcaccagatgggagactatgagaagatgtccatgcatgagctg
gagagaaccttgaaggaggtggggcagcaggaccagagggccggcagcagtcactttgag
cggggacacaagatccagattgagatggggcgtcgagaagaggacggtcccaccccttcg
ccccacttctcgagcaactccgttcccctgccagcccagcttgtcagcaaggaacccatc
ctgcatatgtacaccaagtacccccatgcaggggctctggcggcttcgtatggaccggta
tctggctcagccagagctctgggcagcaacacaggccctcttaaggtgagcgctggcatg
gttgagaatacgatgccagtcaacatgacacaacaggattgtcaagtggctccagggttc
cagacccccgagggtgatggctactacatcaagacacccaaagcaccttcagctgaactt
gaagctacaattctcaaagatgactgggagaccactgtagagaagcttgttgagtgtgat
ccacaagcacaggagaaactgaaacaagccctgagccaggttaggaccaggatccaggcc
aaggagactgcaaagcatgcccacaacacgtttataatagactttgaagagaagatactg
gagaacatgaactgtgagaaagaccaccggcctgtcgtcgactgtagtcatggcgactgt
agtcacggcggtaaccatgtaacacaccaggtcaaacctcctcagcagaatgtttcagtc
caacagcctgaaagcagggctgttcagatgcaggagtctgggctctcccgctacgcccgc
cagcccgatcctcaccacgtccgccagcctgaccctcaccccagggaccccagggacccc
agggactctcattggatgccgcagcgcgggggcagtccaggccacgccccaggttaccag
tacgttgaaccccacccccatatggatgggtacaccagccccaagactccttaccctcgc
ctggtccctgcaggcagcagacagaccaggtatggcccccctcctcctggacccgctagc
catgtacaagtagaacgccaagggatacatgcctccaaacgccagatggaggcagcagac
ctccagtatgccaaacaggtgcaggacaaggagcgtgaggagtacctgaggcacctggag
gatgtccagaggaggcacgaccagatggaccgtatggagcagcagaagcggacccaggag
gagcgggacaggaagatcgccagggagcttgccatgagggaggccatgtacaataattac
ccctag

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