Strongylocentrotus purpuratus (purple sea urchin): 575234
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Entry
575234 CDS
T01019
Name
(RefSeq) vacuolar protein sorting-associated protein 13C isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spu04131
]
575234
Membrane trafficking [BR:
spu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
575234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
FAM91_N
Motif
Other DBs
NCBI-GeneID:
575234
NCBI-ProteinID:
XP_030829186
UniProt:
A0A7M7ST43
LinkDB
All DBs
Position
Unknown
AA seq
3314 aa
AA seq
DB search
MVFESLVADLLNRFLGPYVENLDASQLKLGIWSGDVVLQNLFVKEGALDELDLPVKIKVG
NIGKLTLKIPWKNIYAAPVEATLEGLYIVAAPNADIKYNAEKDKKQKFEAKQRTLQRVED
AKTKEKEKDKVKDPKADSFAEKLAMQVVKNVQVKIRDIHVRYEDRTTNPKAPFALGATLQ
NISLETTDENWLPCVVDQTVQLVHKMLRLDSLAVYFNSGSDMYTTKDRQEMLDIMKSSIG
TEGSIPKGYQYLIEPISSQAQLRLNPKPESNLSVPQAYVNLVIQSIGVGVRRKQYRDVMQ
LLVSFERMTRNEPFRKYKPDVPLHGHAKEWWHYAQNSILEETVRRRHRMWSWAHISKHRK
LVKHYINLYVDKLDTNKPSKDLLKKLEDMEKELDVFNITLSRQQAEVEFKKRGLKKKKEK
AESGGWFGGLWGGKKKDQKKQAEEDDLASMANKFQDAMTEEEKAKLYAAIGFSETSVNTT
LPKDYVGIDANFKLLETSVKLFEDDDELQILNLAVTDLGAVFKQRPAAEAIKLDLQLGEF
SVLGAPTNGQRPQMVESQVTLEDEKVSEVSLQFETNPMDGKADQRITLRTQPLKVVYDAH
TINSIAAFFKPPQDVHLDELSAAAMSNLTELSDTSTTGLQFMVDNKQILDINVDVKSTYV
IIPENGVFDGSGSVLVVDLGNVKMTTESEERHVGERTENETLEELKRKAYDRFNLDIQDV
QVIFAPKGEDWQAIRKQHGSSPLHLLQPMDLHISLQKCMVEDARLPKMKVKGELPDVSID
LSDHKLKEILALATSIPLPESDEPEAPAAQRGPKGSAGAGAARGGQEGATASVSVVKALV
SLEESDGYETASEWWTESETYAVGRGVSDSKLIAVAGDDSDDEFLSADEGSSPSLLSKKK
QAIQRQQSTSVYLRSDVELQFELKRVTLNLGQREADGSESPVLGVAIHSLGAKVQVRPLD
MDVELSLGSIAAQHHKFQVPGSEELYLVRTPAYDEKAERLLSVKYHKIDKNNPEFATTYK
STEQMITAHFTTLEVVAHCEAILDITEFADTLVASLDQSGKTPAVEDGHVEDEGYISEDD
KKPERKRTKGVKPTDVIDVQVVATLDTIALVVCTQEASLTEVAVKGLEANVTVQKHKTCV
NACLQEITVVDPTPDALHPRILSTLDKEVFKMALTLYNHATVGDLYSDMEAVDMRMGLKV
GCIRAVFLNKFVNNLLGFVDHFNRAKALAAEAGANAASAAQQAAEDINAKAPRIAMDIVV
KAPVIVIPSNSTSETGMVADFGQLSVKNSFRIVAGSEKLENPAVIDTMHVALESMQLSRS
IIQKEVVKSDVLILHPMCLHVNLARNLSVAWYHDAPAIAVSGKLDAIQISMATDDFGIVM
SVLNENLQEGQPESKPSVKPVEGAGDAPAAEGGPPKDSAATETTAAEVTPSGKPEEEKPA
EEPWVQVKADFEMEKIGVSLYTGTHDLTLLSGRQERQDKDTLGHFAVCQLIVGATVMSDQ
AVEAKTKLGDILLNDMRSNNPNAITRMIYRYGETDENIVDVDFKMSAKKAIILDAILRNL
RACICTEFLVTCAEIFTKALPADAQGTKSGTSIAAKPSTTSQASAAAAAPAEEGTKNDMQ
IKAILQNPEIILVADSSTKDTNALILQASGEVNLIQSDGTMKMTGGLPMLRIDACPFKEE
LRKGRTSKVLVPCHIDFHLSSPEGQGQRISVDLPELVLNISPETVKILSAVAQTVSPSKA
EEMEEKKKAVDMSDVWDVKHLKTSDFWFLHQDEGADVDDFTLPLVPVVPPPQQVEELVAN
IKTIVVKIEAASGRRFVPMLILEASMHAIVKDWSSRLYVESHMKLEVSTYNEKVAAWEPL
IESIEQANEKYIPWSLSVNVVKNDDLLDAGSTTVSSEDEDSDNVSLAPPAMTVTVSAEET
LQMTVTKTSLALFNKLGQVFGQAMAEPTTSLKDTDVIPACTVTNQTGVAITVKPGSYYQR
PKTGDVASVKHTESIDLDVSEKVRASKKMAVVNKSPISPSDMELSIQVEGYEELHHIPIV
QAGNVLYNLQPIKKSSEKVFSITLEIKATLDMRKVIVRSPLQIFNHFDKPVDIYTRDSTI
VKKLGEVQPNESYVVPLHVAHTQELLAKPVDDSHLMCDQPILYENLWKEKMAAGKKQVTF
RCPAKVDGYTPLFFNVQILEDALLDVKGTSLHSPKYNIHLHPVVSLRNLLPIPIYYTLQG
SADEVKIEPCEQSKMFNVELAKTMMFVRIADYNGMEWRGEMTLRTTLQEYSQLGFRAGNK
WTEAGVWYDYSQGFIDMAMFVPYTLINKTGLPIAYKGGGEEQIEHPADKESPIFFSYPSK
AFSPGKNKIQLKVGESQWSDKFSLDTVGSSGFISCKMSKQDYEVLGLMLAQGSGIRRPKK
YNISVQIQLSNLGFSKVVMFTPRYLLVNQTNYDICCSEPQGTFKDVAVGQCVPFWPVDKK
ENDKLVVMKKDGTETSLPFNFTEPQTTVLRLPEIGGIIVESQVTETATVIAFKSFAVGHF
TTQLVNHTQDVPITFTQFGIEDKMFLAPREMAVYTWQNPTGKRQLVWTVDGKDSKTDLKK
KACHTTCTISDGIGEVKQANNKLLYWVSFLNGTGRVILFTEDLAIATKAQQAAELEQPDL
ELVVSLPGIGLSLVNNISRTEVAYIGLISSGIIWQNKVRRRYKDLSVREMKSLEEGFVKA
GLDASDQKDLPPKVYKLDHGMEVDYGRMLMLAPKKQQLRRTYHSGIWAQVRTSSHQLQLH
LTINRLQVDNQMPAAIFPTPVVPVALPKTVAAENAPKQLLEFSMMVRFSEHSSVKQIKYL
KLLVQEMAVKLDMGFLANVAAIFQSDEELVIDRVALLELDKELVRLELADAEYVKVALAK
DFNFYDSFHLSPLKIHVSFSLSETGKEDKSLLSARANARQNALNLLLQSVGVTLTNVDDV
IFKLGFFEREYQFYSPEQLSSEVIRHYSNQAIKQLYVLVLGLDVIGNPFGFVRGVGTGVK
DLFYEPYQGIVQGPEEFAEGVALGMRSLFGHAVGGAAGAVSRITGTLGKGLAALTMDEDY
KRKRQQAINQRPATFQEGLARGGKGLVMGFYEGVSGVVKNPFEGAKKEGAKGFFKGVGKG
LAGVVAKPTGGIIDFASGTFEGIRRVVESEVEIHKLREPRYIGADGIIRAYNKSMALGNS
LLLQVDKGKYAHTEDYVAHMQVTADKKNYILATDKRVIYTSRGEMLGQWDVDFEFMYINL
KELPKVTEKGILIEPKEKEAPKKGPLGRGFGRGLGSLLKGKQGSGKMVHILDQKTAEVFV
SKLHFAIAKATNAV
NT seq
9945 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgaatcccttgttgcggaccttctgaacaggttcctcggtccttacgtcgag
aatttagacgcttcacagctaaaacttggcatttggtccggtgatgttgtactccaaaac
ctgtttgtcaaggaaggtgctctggatgagcttgacctgccagtgaagatcaaggttggt
aacattggaaagctaaccctcaagatcccttggaagaacatctatgctgctccggtagag
gccacccttgagggattgtacatagttgcagccccaaatgctgatatcaagtacaatgca
gagaaggacaagaaacagaagtttgaagccaagcagaggaccctgcagagagtggaagat
gccaagacaaaggaaaaggaaaaagataaagtgaaagaccccaaagcagactcctttgca
gagaagctagccatgcaggtagtcaagaatgtccaggtcaagatacgtgatattcacgtc
aggtacgaggacaggacaaccaatcccaaggctccgtttgccctcggtgctacccttcag
aacatctccttagagacaacagatgagaattggcttccgtgtgttgtggaccaaacagtg
caacttgtacacaagatgcttcgacttgattcgcttgctgtctactttaactcgggatct
gatatgtacaccacgaaagacaggcaagaaatgctggatatcatgaagagttctattggt
acggaaggcagtataccaaaggggtatcagtacttgatcgagccaatctcatcacaagcc
cagctacggctcaaccccaaaccagagtccaacctgtctgtccctcaagcctatgtcaat
ctggtcatacaaagcattggagtgggtgtccgtcgcaagcaatacagggacgtgatgcag
ctgcttgtatcgtttgaacgaatgactcgcaatgaaccgttcaggaagtacaaaccagat
gttcctcttcatggccatgccaaagaatggtggcactatgctcagaacagcatcttggag
gaaactgtgcgacggagacatcgtatgtggtcgtgggctcacatcagcaagcatcgtaag
ctggtcaagcattacatcaacctgtatgtggacaaactggacaccaacaaaccttccaag
gacttgctgaagaagcttgaggacatggagaaggaactagatgtgttcaacatcaccctg
agccgacagcaggctgaggtagagttcaagaagagaggactgaagaagaagaaggagaaa
gcagaaagcggaggatggtttggaggattgtggggaggaaagaagaaagatcagaagaag
caagcagaagaggatgacttagcatctatggctaacaaattccaggatgccatgaccgag
gaagagaaagccaagctctacgcagccatcggattcagtgagacttcagtcaatactaca
ctacccaaagattatgttggaatagatgccaacttcaagctgctagaaaccagtgtgaag
ctctttgaagatgatgatgaattacagatcttgaaccttgctgtcacagacctaggagca
gtcttcaaacaaaggccagcagccgaagccatcaagcttgatttacagctcggcgagttc
agcgtccttggggcacccaccaatggacagcgccctcagatggtagagtcacaggtcact
cttgaagacgagaaggtctctgaggtcagtcttcagtttgagaccaaccctatggacggc
aaggctgatcagcgcattactctacggacccaacctctcaaggttgtctatgatgcgcat
acaatcaacagtatagctgctttcttcaaacctccacaagacgtgcacctggatgagctt
tctgcagctgctatgtccaacctgacagaactgagcgacacctcaaccacgggtctccag
ttcatggtagacaacaagcagatcctggatatcaatgtggatgtcaagtctacctatgtc
atcatcccagagaatggtgtctttgatggctcaggatcagtgctcgttgtggaccttgga
aatgtgaaaatgacaacagagagtgaggagagacatgtaggagaaagaactgagaatgaa
acacttgaggaactcaagcgcaaggcctacgatcgcttcaaccttgacattcaagatgtt
caggtcatctttgctccaaaaggtgaagattggcaggctatacgtaagcagcatggatcg
tcacccttgcatctccttcagccgatggatcttcatatctcactacagaaatgcatggtg
gaggatgctagacttcccaagatgaaagtgaagggtgaactacctgatgtatcaatcgat
ctatcagaccacaagctgaaggagatactggccctggcaaccagtataccgctacctgag
agtgatgaaccagaagcacctgctgctcaaagaggccccaagggtagcgcaggagcagga
gcagcaaggggaggccaggagggtgcgacagcctccgtaagtgtggtcaaggcgcttgtg
tctttggaggaatcggatggttatgagacggcgagtgaatggtggacagagagtgagacc
tatgctgtagggagaggcgtgtcggacagcaaactcattgccgtggcaggagacgatagt
gacgatgagtttttatcggcagacgagggatcaagtccctcgctgctatccaagaagaaa
caggccatacaacgccagcagagtaccagcgtctacttgagatcagacgtggagctccaa
tttgaactaaagagagttaccttgaacctaggccagcgagaggctgatggatccgagagc
cctgttcttggtgtagctatccattccttaggagctaaggtccaagtcagacctctagac
atggatgtagagctgtccctagggagtatagcagctcagcatcacaagttccaagtacct
ggatctgaagagttgtacctggtaagaacaccagcctatgatgagaaagctgaaaggctc
ttgtctgtcaaatatcataagattgacaagaacaaccctgagtttgccaccacctacaag
tctactgagcagatgatcacagctcacttcaccaccctcgaggtggtagctcactgtgag
gccatcctggatatcacagagtttgccgacaccctggtggctagtctggaccagtctggc
aagacaccggcagtggaggatggacacgtagaggatgaagggtacatcagtgaagatgat
aagaaaccggaacgcaagcgaaccaagggagtgaagcccactgatgtcattgatgtccaa
gttgtagctactcttgataccatcgctctagtagtatgcacccaggaggctagtcttaca
gaggtcgctgttaaaggattggaggctaatgtgactgttcagaagcacaagacttgtgtg
aacgcctgtctccaggagatcactgtagttgatcctacaccagatgctcttcatcccagg
attctgtctaccttagataaggaggtgttcaagatggccctcaccctctacaaccatgct
acagtaggtgacctgtactcagacatggaggcagttgatatgagaatgggattaaaggtg
ggatgtatcagagctgtcttcctcaataagtttgtcaacaatctattgggttttgttgat
cacttcaaccgtgccaaggcgcttgcagcagaggctggtgccaacgcagcatctgcagcc
caacaggcagcagaggacatcaacgctaaggccccacgcatcgccatggacatcgtcgtc
aaggcacccgtcatcgtcatccctagtaactccacatcagagacaggaatggttgctgac
ttcggtcagttgagtgtcaagaattccttcaggatcgtagcaggatctgagaagcttgag
aatccagctgtgatagataccatgcatgtggctttggagtccatgcagctgtctagatct
atcatccagaaagaggtcgtgaaatcggatgtacttatcctgcatcccatgtgtctacac
gtcaacctggccaggaacctttcagtggcctggtaccatgatgctccggctatagcagtc
tcaggaaaacttgatgcaattcagatctccatggcaactgatgattttggcatcgtgatg
tcggtcctgaatgagaatctacaggaaggtcagccggagagtaagccatctgtcaagcct
gtagaaggagcaggggatgcacctgcagccgagggtgggccaccaaaagatagtgcagct
acagaaacaactgcagcagaagtcacacctagtggtaagccagaagaagagaaacctgct
gaagagccctgggtacaggtcaaggctgattttgagatggagaagattggtgtctcactc
tacacagggacgcatgacctgactctactgagtggacgacaagaaaggcaagacaaggac
accctggggcacttcgctgtgtgtcagttgattgtaggagctacagtcatgtcagaccag
gctgtagaggctaagactaagcttggagacatcctcctcaatgatatgaggtccaacaat
cctaatgccatcactagaatgatttacagatatggggagacagatgagaacattgtggat
gtggacttcaagatgtcagccaagaaagccatcattttggatgcaatcctgcgcaacctg
cgcgcctgcatctgcaccgagttcctggtgacttgtgcagagatcttcaccaaggctctt
ccagcagatgctcagggtacaaagtctggcaccagtatagcagccaagccgtctaccacc
agtcaagcctctgctgctgcagcagctcctgctgaagaagggaccaagaatgatatgcag
atcaaggccatcctgcagaatcctgagatcatcctggtggccgactccagcactaaggac
accaatgctctcatcctgcaggcatcaggtgaggtgaacctgatccaatctgatggtacc
atgaagatgaccggaggactacctatgcttaggattgatgcttgtccattcaaggaagag
ctcaggaaaggaagaactagcaaggttcttgtgccatgccacattgacttccacctgagc
tctcctgaaggtcaggggcagaggatctcagtagacctcccagagctggtactcaatatc
tcaccagaaacagtcaagattctctctgctgtggctcaaactgtttccccctctaaggct
gaagaaatggaagagaagaagaaggctgttgatatgtcggatgtttgggatgtgaaacat
ctcaaaacaagcgatttctggttcctccatcaagatgaaggtgctgacgtagatgacttc
acactgcctctggtccccgtagtgccccctccccagcaggtggaggagctagtagccaac
attaagaccattgtagtgaagatagaggctgccagtggacgccgctttgtccctatgctc
attctagaggccagcatgcatgccatcgtcaaggattggtcctcacggttgtatgttgag
agccacatgaagctggaagtttcaacgtacaacgagaaggttgcagcatgggagccattg
atcgagtccattgagcaggctaatgagaagtacatcccatggagtctctctgtcaacgtg
gtcaagaatgatgacctgctggatgccggctcaactaccgtctcatcagaagatgaggac
agtgataatgtgagccttgcccctccagccatgactgtcactgtgtctgcagaagaaaca
cttcagatgaccgtcacaaagacatcactggcactcttcaataaactaggacaggtgttt
ggtcaagcgatggccgaaccaacaacatcattgaaggacaccgatgtcatcccagcttgc
actgtaaccaaccaaacaggagtagccattactgtcaaacctggttcatactatcagaga
cccaagactggagatgtagcttctgtcaagcacacagagagcattgatttggatgtatca
gagaaggtcagagcaagcaagaagatggccgtggtcaacaaatcacccatctcaccctcc
gatatggaactgtctattcaggttgaggggtatgaggagctccaccatatcccgatagta
caggcagggaacgtcctctacaacctacaaccaatcaagaagtcatcggagaaggtcttc
tctatcaccctagagatcaaggcgacccttgacatgagaaaggtcattgtcaggtctcca
cttcagattttcaatcactttgacaaaccagttgacatctacaccagagactctaccatt
gtgaagaagcttggtgaagtccaacccaatgagagttatgtagtaccccttcatgtcgct
cacacccaggaactactcgctaaaccagtggatgacagccatctgatgtgtgaccagcct
atattgtatgagaatctatggaaagagaagatggctgctggtaagaaacaggtcacattc
aggtgccctgccaaggttgatggatacacaccactcttcttcaatgttcaaattctggag
gatgctttgttagatgtcaaaggaacatcgcttcattctcccaagtataacatccatctt
cacccagtagtatctctccggaatctccttccaatccccatctactacacactacagggt
tcggcagatgaagtgaagattgagccatgtgagcagagcaagatgttcaatgtggaactt
gccaagaccatgatgtttgtcaggattgccgactacaatggcatggaatggcgtggggag
atgacccttcgtaccaccctccaggagtactctcagcttggattcagagctggtaacaag
tggacagaggctggtgtctggtatgactacagtcagggattcattgatatggccatgttt
gtaccctacacactcatcaacaagactggactacccattgcctacaagggaggaggagag
gaacagatagagcatccagctgataaagagagtcccatcttcttctcctatccatccaag
gccttcagccctggcaagaacaagatccagctgaaagttggagaatcacaatggtcagac
aaattctcactggacacagtgggaagttctggcttcatttcatgcaagatgtccaaacag
gactatgaggtattaggacttatgcttgctcagggaagtggcatacgacgaccaaaaaaa
tacaatatcagtgtccagattcagctgagtaacttaggtttctccaaggtggtgatgttc
acacctagatatcttctggtcaaccaaaccaactatgatatctgctgttccgaaccacag
ggaacattcaaagatgtggctgtcggacagtgtgtacctttttggcctgtggacaagaaa
gagaatgacaagctggtggtgatgaagaaagacgggacagagacatctcttccatttaac
ttcacagaaccacagactacagtactcagacttccagagattggtggtatcattgtcgag
agccaggtaacagagacagctacagtcatcgctttcaaatcctttgctgtgggtcacttc
actacccaactggtcaaccatacacaagatgttcctattacattcacacagtttggaatt
gaagataagatgttcctagccccaagggagatggctgtatacacatggcaaaaccctaca
ggcaagcgacaacttgtatggacagtggatggcaaagatagcaagactgatctcaagaag
aaagcatgtcatactacttgtaccatatcagatgggattggagaagtgaagcaagcaaac
aacaagctgctgtactgggtgtctttcttgaatggaaccgggagagtaatcctcttcact
gaagatctagctattgctaccaaagcacagcaggctgcagagttagaacagcctgatttg
gagttggtagtctctcttccaggcattggtctttcgcttgtcaacaacatctctaggaca
gaggtagcctatattggtctcatcagctccgggatcatctggcagaacaaggtccgtcgc
cgatacaaggatctgagcgtgagggagatgaagagcttagaagaaggttttgtgaaggca
ggattagatgctagtgatcagaaggatctaccacccaaagtatacaaactagaccatggc
atggaggttgactatggacgtatgctgatgctagctcccaaaaagcagcagctgagacgt
acctaccactccggtatctgggcccaggttcgtacctccagccatcaactccagctccat
ctcaccatcaacaggctccaggtggataatcagatgcctgctgctatcttccccacccca
gtggttcctgtagccctccccaagaccgtggcagctgaaaatgcacccaagcagcttcta
gagttcagcatgatggtgcgtttctcagagcacagctcggtcaaacagatcaagtacctc
aagctcttggtccaagagatggcggtcaagctagacatgggattcctggccaatgtagcg
gccatctttcagtcggatgaggaactagtcattgatagggttgctctgctagagttggat
aaggagctggtacgattagagttagctgacgctgagtatgtcaaggtggcattggctaaa
gacttcaacttctatgactccttccatctctctccactcaagatccatgtgagcttctcc
ctatctgagaccggtaaggaggacaagtctctgctgagtgctcgggccaacgctcgtcag
aacgccctcaatctcctgctgcagagtgtcggggtcaccttgaccaatgtggatgatgtc
atcttcaagcttggtttctttgagagagagtaccagttctacagcccagagcagctatca
tcggaggtaatacgtcattactccaaccaggccatcaaacagctctatgtacttgtgctt
ggtcttgatgtgattggcaatccatttggttttgtcaggggagtagggacaggtgtcaag
gatctcttctatgaaccttaccagggtatcgtgcaaggtccagaggagtttgctgagggg
gtagctctaggcatgaggagtctctttggtcatgcagttggtggagcagcaggggctgta
tctcgcatcacaggaacactggggaaaggactggcagcactcaccatggatgaagactac
aagcgtaagagacaacaagctatcaaccaaagacctgctacattccaagagggtctagcc
agaggtggcaaggggctagttatgggtttctatgaaggtgtgagtggtgtggtgaagaat
ccatttgaaggggccaagaaggaaggtgcgaagggcttcttcaagggtgtaggcaagggt
ctagctggggtagtagccaagcctactggaggtatcattgactttgccagcggtaccttt
gaaggtatcagaagggttgtagaatccgaggtagagatccacaagctgcgtgagcctcgc
tacatcggtgctgacggtatcatcagggcgtacaacaagtctatggctctgggcaactct
ctccttctacaggtggacaaagggaagtatgctcacacagaggactatgttgctcacatg
caggtcaccgcagacaagaagaactacatcctagctacagacaaacgtgtgatctacaca
tctcgtggagaaatgcttggccagtgggacgtcgattttgaattcatgtacatcaacctc
aaggaactacccaaagtcactgaaaagggtattctcattgaaccaaaggagaaggaagca
cctaaaaagggtccacttggtcgagggtttggacgaggcttaggaagtctgctcaagggc
aaacaaggatctggcaagatggttcacatcctagatcagaagactgctgaggtgtttgta
tccaagcttcattttgccatagcaaaggcaaccaacgcggtatga
DBGET
integrated database retrieval system
