Strongylocentrotus purpuratus (purple sea urchin): 575687
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Entry
575687 CDS
T01019
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
575687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
575687
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
575687
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_12
ANAPC3
ARM_TT21
ANAPC8
Iml2-TPR_39
TPR_NUP160_120_M
Motif
Other DBs
NCBI-GeneID:
575687
NCBI-ProteinID:
XP_030831305
UniProt:
A0A7M7N576
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MANKDSREQQDAGSKRDESLSPLQLPAITGEEKDVATAAHSHFEAGNYNGCVEQVRKLAN
MRPTDPKVQHNLAVALFYQSGCRKVDEYRRSLGNVCSQVHVDLEQIDSLGDADQAIFFFN
NAVLLHHLRQHHQAIRVLEKLFQVIEPLEEWVAVRILLLLIESYLITHQPDKALATLVYL
EKLMQTSEAKKEAADKGKDSKDDEHRPVDTEKVKAKIHQFKTKCYLQLKHLKFCKREIKS
VKTVMNSNGAQSPITLFLKANFEFERQNNRKAIKLLNSSPEGLDYNQMGQCIPVMYYNNL
VSIHYAMHKYHLGAHYARRALQENATAVKELPKKSGRAIQTLGMNHHHELLYNTGIVLLH
AGRPLAAFDCLVEAVQVFPTNPRLWLRLAECCIAANKTLSEGESKGGSKQSIVHSTIGTG
SHRKFILSPGGLDTNYGTDIQPAAMPVASLEFASLCLSNALSLLPEKPGSVPTTPISSQN
SVGSEASDAASKLSGPPTIPAPPGPPLKPTEVSNLRCSVMAATAYVSLSLGDDVTALEHA
RSLLGQPKLSGSLQFLARMYAAEALLKHDQIGEAIQLLNPETVCDVSVIITPTPDFGENK
DRDRNEKSNNHDGGSSGGGGGGGGGNNNNTSDPNEGTEPRKVIHQYYPASIQVARAHMFF
NLATTHVFRSEWDKARRCLQQGCSMVPVHDIPKQALYTAIYLELHTGNYSLALQMVKKQQ
LIPYIKITPVPFIEPINRPVPVPASSTPSGFPAPIGPPSTSRSSSSFGLPTPIGAGKPSA
NTWR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggccaataaggacagtcgtgagcagcaggacgcaggaagcaagcgagacgagtctctg
tctcccctccaactccctgcaatcacgggagaagagaaggatgttgctaccgcagctcac
agccactttgaggcgggaaactacaatggctgcgtggagcaggtccgtaagcttgctaac
atgcgtcccacagatcctaaggtgcagcacaaccttgcagtggcactcttctaccagtcg
ggatgtagaaaggtggatgagtatagacgcagccttggcaacgtttgcagtcaggtacat
gttgatctagagcagattgattctctcggggatgcggatcaagccatcttctttttcaat
aatgctgtattactccatcatctacgacagcatcatcaggcaatccgtgtcttagagaaa
ctcttccaagttattgagcctttagaagagtgggtagctgtgcgtatcttgcttctcttg
attgagagttacctgatcactcatcagcctgacaaggctctagctaccctagtctacctg
gagaagctcatgcagaccagtgaagccaaaaaggaggctgcagacaaggggaaagacagc
aaggatgatgagcacagacctgtggatacagagaaagtgaaggccaaaattcatcagttc
aaaaccaagtgctaccttcaactgaaacatctcaagttctgtaagagggagatcaagtct
gtcaagactgtcatgaattccaatggagcgcagtcgcccatcacgctcttcctgaaggcc
aactttgagtttgagaggcagaacaaccgcaaggccatcaagcttctgaacagctctcct
gagggcctggactataatcagatgggccaatgcatccctgtcatgtactataataacctg
gtgtctatccactatgccatgcacaagtaccacttgggagcacactatgccaggagggct
ctgcaggagaatgccacggctgtcaaggagctgccaaagaagtctggtcgagcaatccag
actctgggtatgaaccaccatcatgagcttctctataacactgggatcgttctactgcat
gcagggcgccctctggcagcctttgactgtctagtggaagcagtgcaggtctttcctacc
aaccccagactctggttgagactagccgagtgctgcatcgccgccaacaagacattgagt
gaaggagagagtaaaggtggcagcaagcagagcatcgtccatagcaccataggaacagga
tcgcatcgcaagtttatcctatcccccggagggctggataccaactatgggactgatatc
cagccagcagccatgcctgtagcctccctagagtttgcctcactatgcctgagtaacgct
ctctctcttctaccagagaaacctggtagtgtacctaccacgcccatctcatcccagaac
agtgtcggtagtgaggcatccgacgcagcaagtaagctgagcggtcctcctaccattcct
gctccgcccggcccccctctcaagcccacagaggtgtctaacctgcgctgctcagtgatg
gctgccaccgcctatgtgagtctctctctaggtgatgatgtcacagcactagagcatgcc
aggtcattgctgggtcaacccaagctgtcaggatcattacagttcctggctcgaatgtat
gctgcagaagctctgctgaagcatgaccagataggagaggctatccagctcctcaaccct
gagactgtatgcgatgtgtctgtcatcatcacacccactccagactttggtgagaacaag
gaccgagaccgtaatgaaaagagcaacaaccacgatggtggtagcagtggtggtggtggt
ggaggaggagggggtaataacaacaacaccagtgatcctaacgagggtacagaaccacgt
aaggtgatccatcagtactaccctgcttctatccaggttgctagagctcacatgttcttc
aatctggctactacccatgtgttcaggagtgagtgggacaaggcaagaagatgtctgcaa
cagggctgtagcatggtaccagtccatgacattcccaagcaagctctctatacagccatc
tatctggagttacatacaggaaactactctctggctctccagatggtcaagaagcagcag
ttgattccctacatcaagatcacacctgttcccttcattgaacccatcaatagacctgta
ccagtaccagcttccagcaccccttcaggtttccccgcacccatagggccaccctcaacc
tcccgctcctcctcatcatttggcctccccactccgataggagcgggcaaaccaagcgca
aacacctggagatga
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