Strongylocentrotus purpuratus (purple sea urchin): 576055
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Entry
576055 CDS
T01019
Symbol
vasa
Name
(RefSeq) vasa protein
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spu03036
]
576055 (vasa)
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
576055 (vasa)
Chromosome and associated proteins [BR:
spu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
576055 (vasa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
zf-CCHC_3
ResIII
zf-CCHC_2
Utp25_C
HEM4
Cas3-like_C_2
DUF6866_C
Motif
Other DBs
NCBI-GeneID:
576055
NCBI-ProteinID:
NP_001139665
UniProt:
C0KIF4
LinkDB
All DBs
AA seq
766 aa
AA seq
DB search
MSEDWGASSVSGGSSFGKSSFGGSSGGVKDDGFGVGVGRGRGRGRGFSPFASNGGVGGMT
NGTTNGGGESSGGWDESPSKSGSSSSPWGGDGDNGFGKSSFGSKSFGGRGGGGGGGGRGA
ESGGGRGGGGFGGRREGGGGGGGGACYKCQEEGHMARDCPNGDSSGGGRGGGDRSCYNCG
ETGHMSRECPTKDSSGGGRGGGGGDRSCYNCGETGHMSRECPTKDSSGGGGGGGGKCFRC
QEEGHFAKECPNPDTRNEGEGGEAKPPASTYVPPDPSEEESQIYISTEQGINFNKYDDIP
VEVSGRDRPKNIRAFEEAELDETVLSNVRKAHYAKPTPVQKYGMPIISCGRDLMACAQTG
SGKTAAFLLPIITNMITHGGCISTFNVIQEPLALIVSPTRELAIQIYNEARKFCRGTTIR
PVVVYGGTSVSHQMRECQKGCSILVATPGRMHDFVTRGYIGLGKLKFLILDEADRMLDMG
FGPDIQRLIEHPHMPAKGDRQTLMFSATFPNEVQEKAGEYLNDYLFLTVGRVGGAASDIE
QRVFSVGQFDKRDKLMEILRDQKDDDRTLVFVSTKRNADFLASLLSQSEFPTTSIHGDRQ
QQEREEALRDFKTGKAPILVATSVAARGLDIPGVKHVVNYDLPSDIDEYVHRIGRTGRVG
NLGRSTSFYDAEKDANIARALIKILADAQQEVPEFLEEAADSAIGTYHGNAGGSFGGRDT
RKFGGRGGGRGGGSAVGGGDEWGSGGGGPGGGGGGGGGAADDESWD
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagactggggggcctcttcggtgtcgggtggatccagctttggaaagagtagt
tttggtggatcaagtggtggggtcaaagacgatggatttggcgttggagtcggtcgaggt
cgaggaaggggtcgcgggttcagcccctttgcttcaaacggtggtgtcggtggtatgacc
aatgggactaccaatggaggaggagagagtagcggcgggtgggatgagagcccatctaag
agtggctcaagtagcagtccatggggcggtgatggtgataatgggttcggcaagagtagc
tttggtagcaaatcgttcggtggaagaggaggaggtggtggtggtgggggccgaggtgct
gaatcaggaggaggacgaggaggaggaggattcggcggcagacgtgagggtggtggtggt
ggtggtgggggtgcatgttacaagtgccaagaagaagggcacatggccagagattgcccc
aatggagattcctcaggaggaggacgtggaggtggagatagatcctgttataactgcggt
gaaacaggtcacatgtcaagagaatgtcccacaaaggactcgtcaggaggaggacgtggt
ggtggtggtggcgatagaagttgctacaattgcggcgagaccggacacatgtcacgagaa
tgtcccacaaaagactcttcgggtggaggaggtggaggtggtggaaagtgctttagatgt
caagaagaaggccactttgccaaggaatgccccaatccagatacaagaaatgaaggcgaa
ggtggtgaagccaagccgccagcatccacctacgttcctcccgacccatccgaggaagaa
tcacagatctacataagcactgaacaaggaatcaacttcaacaagtatgatgatataccc
gtagaagtcagtggtcgagacaggcccaaaaatatacgagcttttgaggaggccgagcta
gatgagacagtcttgtccaacgtgcgcaaggctcactatgctaagccaacacctgtgcag
aagtatggtatgcccatcatttcttgtggacgtgatctgatggcctgtgctcaaacagga
tctggaaagacggcggcattcctcctacccatcatcaccaacatgatcacccacggagga
tgcatcagcaccttcaacgtgatccaggaaccactggccctcatcgtctcgccaacccgc
gagctggccatccagatctacaacgaggcacgcaagttctgccgcggcaccaccatacga
cctgtggtggtgtatggaggcaccagcgtcagtcatcagatgagagagtgtcagaaggga
tgctccatcctggtagccacccccggacgtatgcatgacttcgtaacccgaggatatatc
ggcctgggcaagctgaagttcctgatccttgacgaagccgaccgtatgttggacatgggt
ttcggtcccgacatccagagactgatagagcaccctcacatgcctgccaagggtgatcgt
cagaccctgatgttcagtgcgaccttccccaacgaggtccaggagaaggcaggggagtac
ctcaacgactacctcttcctgacggtagggagggtaggaggagctgcctctgatatcgag
cagagggtgttctcggtcgggcagttcgacaagcgggataagctgatggagatcctgagg
gatcagaaagatgatgaccgtactctggtgtttgtttcgacaaagaggaatgctgatttc
ttggcctctcttctcagtcaatctgaattccccaccaccagcatccatggagaccgtcag
cagcaggagcgtgaagaagccctgcgtgacttcaagaccggcaaggcaccaatcctcgtt
gccacgtccgttgccgccagaggtctggacatcccaggggtcaagcacgtggtcaactac
gaccttccaagcgacatcgatgagtacgtgcatcgcatcgggcgtaccggacgtgtagga
aaccttggacgatcaactagcttctatgatgcagaaaaggatgctaacatcgcgagagct
ctcataaaaatcttggctgatgcacagcaggaagtaccggagttcttagaggaggctgct
gattcagccattggaacgtaccatggcaatgctggagggagctttggaggcagggatacc
aggaagttcggtggtcgaggaggaggaaggggaggaggaagtgccgttggtggtggagac
gagtggggatctggaggaggaggccctggcggcggcggcggcggcggaggaggagctgct
gatgatgaatcatgggattag
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integrated database retrieval system
