Strongylocentrotus purpuratus (purple sea urchin): 576214
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Entry
576214 CDS
T01019
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spu04147
]
576214
00535 Proteoglycans [BR:
spu00535
]
576214
00536 Glycosaminoglycan binding proteins [BR:
spu00536
]
576214
Exosome [BR:
spu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
576214
Proteoglycans [BR:
spu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
576214
Glycosaminoglycan binding proteins [BR:
spu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
576214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Endostatin
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
576214
NCBI-ProteinID:
XP_030830243
UniProt:
A0A7M7N345
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MLLRPYSGSRGTVFGVTDPYHQTIILSVNITSMSIEQMRISLILTNIDYTSESTEVAAFL
VPSFTNHWTQLALSIRDNQVTLFLDCQELGMQFFDKNQGWHIRIPQMAPLFIGHLGTVGE
RVQYRGDIQQIIITNSADSAEEHCPIGEFSGSGDEPTSMPEMPITYFTQYDAETPSTPAN
NVRLPASVQPPLEQVATILPKAPPTTPTLQATPSSQPAVVVPPGDSMKGQKGEEGWPGVN
GIHGNPGVPGPRGVGGETGPEGPEGPMGPKGEKGDLGDAGPVGPLGEEGFPGVAGPPGDP
GVKGEEGDQGMTGATGAKGEPGVGVPGLPGVAPTLSSEYMMRLGGEKGDPGRDGYPGVPG
VQGPMGIPGVDGIGVPGPKGDKGEVGLGLPGSQGKPGKEGPKGETGQRGLPGPSSLESFI
EGSGLEMFVGPPGQPGSPGRPGVMGPHGPRGESGLDGIPGLDGVPGQPGPAGRDGEPGPK
GEPGALTEEEILDEIANLTAEFEMEGLSGMDGFNGSRGPPGVPGAVGPKGDSGMDGNPGM
KGERGSSGLPGLEGPEGMKGGPGQNGIPGVPGIAGIPGESGQNGARGAPGPAGPPGPPGP
SPLLPPGFPWTNMALNQDQEGSADGSGVWSGTVPPYLMGSPGVQGPPGPEGMQGEPGLVG
EPGIPGEPAIPGMPGLTGERGERGLPGPRGMEGETGMDGAAGQKGDTGDPGVPGQPGADG
FPGPRGVGVQGPPGDRGLPGPRGIQGLKGDVGEQGPACEIPPEILALSEHFAGVGSGDIG
GGMMTRAPQELTSTKGEKGDIGFDGVPGMDGQQGAKGYPGPRGPGGVVGPKGNNGTQGEK
GDVGAVGYAGPRGVKGDKGDMFLPTEEEMLMLKGDGGDTGRRGKKGLKGQFGIPGRPGRV
GKTGPEGQTGPEGPVGPQGPPGPSGGGEGTCECDPAAFPPAFFPPGEKGSMGAPGSPGPM
GPDGVPGAPGLPGVQGLRGLQGYAGEPGIEGLEGRPGAQGVPGVPGIDGARGEKGDPGDF
FVNDEVFIGPPGEQGLPGRDGQPGQSIKGDTGEPGHGAEGMPGRDGRDGSQGPPGPPGMP
GHPGEPAYYTGDGNGERGPKGEPGEPGREGQSGAPGFDGRPGSRGPRGPQGPTGYGEQGP
PGEPGTPGEPGRGSIGHLGGGDYVGMARFATIQDMLDGMRDLEVGTLAFIIRVQELYIRV
ETGMQQVLLGATFTLPPTSEPRPQPRPQPRPQPSITSRTTTTTLIPTTTLAPFVDPTEPP
QIPGPGLTDRTEEPILPGPEIPVSDQPMLYMYALNTPQEGYMIGGISGADFKCWKQAKAA
GLKGTYRAFLSSPLQDIRTIVRKQDKGLPIANGKQEVLFNSWDDIFSTENEAPFHDSFHI
YSFDGKDVMTDETWPDKYMWHGSYANGERMAESFCEAWRAQNHFARGQASPLSDHKLLGQ
DEFPCNNAFAVLCVQTARPNARK
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgcccctacagcggtagcaggggtacagtctttggtgtgacagacccctac
caccagaccatcatcctcagcgtgaacattaccagcatgtctatagagcagatgagaata
agcctcatacttactaacatagactataccagtgagtcgacagaggtagcagcctttctc
gtgccttccttcacaaaccattggacgcaactggcgttgagtataagggacaaccaggtt
accctgtttctagactgtcaggaacttggtatgcaatttttcgataaaaatcaaggatgg
cacatcaggataccacagatggctccccttttcattggacatctaggaacagtgggagaa
cgggtgcaatatcggggggatatccaacagattattatcactaacagtgcagactcggca
gaagaacattgcccaatcggtgaattttcaggaagtggggatgaaccaacaagcatgcca
gagatgccaatcacatacttcacccagtatgacgccgagactccatcaactccagcaaat
aatgtccggctaccagccagtgtacagccccctctggagcaggtggctaccatcctaccc
aaggccccacccaccacgcccactttgcaggccacgccttcctctcaaccagctgtagtc
gttcctcctggggattctatgaaaggacagaaaggagaggagggctggccgggagtaaac
ggtatacatggcaaccccggcgtcccagggccacgtggagtaggaggtgaaactggaccc
gaggggcctgagggaccaatggggcccaaaggggaaaaaggtgacttaggggatgctggc
cctgtaggacctctaggtgaggaagggtttccgggtgtggccggtcctcctggtgaccca
ggggtcaagggtgaggaaggtgaccaaggaatgaccggagcaacaggagcaaagggagag
cctggagtaggtgtcccaggtctacctggtgttgcgccgaccctcagctctgaatatatg
atgcgtctgggaggtgaaaagggtgaccctggaagggatggttacccaggtgtaccgggt
gttcaaggaccaatgggaatcccaggagttgatggtataggagtgccaggtccaaaagga
gataagggtgaagtaggactaggcttgcctggctctcaaggtaaacctggtaaagaagga
ccaaagggagagactgggcaaagaggactgccaggtccctcatctcttgaaagttttatt
gagggatctggactggagatgtttgttgggcctcctggtcaacctggttctcctggacgt
cctggagtgatgggaccgcacggaccccgaggtgaatctggtctggatgggattcctggt
ctggatggtgttccaggacaacctggtcctgcaggccgagatggagaacctggtcccaag
ggagaaccgggagctctgacggaagaggagatcctagatgagatcgctaacctaactgcc
gagtttgagatggaggggttgtctggaatggatgggtttaatggatccagaggccctcct
ggtgtaccgggtgctgttggtcctaaaggagattctggtatggatggaaatcctggaatg
aaaggtgaaaggggatcatctggtctccctggtcttgaaggacctgagggaatgaagggc
ggcccgggtcagaatggcataccaggtgtaccaggcattgctggaataccaggggaatct
ggtcagaatggagccaggggtgcaccgggcccagctggtcccccagggccaccaggaccc
tcacccctcctaccaccgggcttcccatggaccaatatggccctgaatcaagaccaggaa
ggaagtgctgatggaagcggggtatggagtggaactgttccaccttacttgatgggatct
cctggtgtacaaggcccacctggaccagagggtatgcaaggagaaccaggactggtcgga
gaaccaggaatcccaggagagccagcaatcccagggatgcctggtctaacaggagagagg
ggagagagggggttgcctggacctaggggaatggagggagagactggtatggatggagct
gctggacaaaagggtgacactggcgatcctggagttcccggacagccgggagcagatggt
tttcccggaccacgtggtgtaggggtccagggtccacctggagaccgtggtctccctgga
ccaagagggatccaaggactcaagggagatgtaggagaacaaggacctgcgtgtgaaatc
ccaccagaaatccttgccttgtctgagcactttgctggagtgggttcaggagacatagga
ggaggcatgatgaccagggcaccgcaggaattaactagtacaaagggagagaagggtgat
ataggttttgatggagtacctggcatggatggtcagcaaggagctaaaggctatcctggg
cctagaggacctggcggtgtagtaggacctaaaggaaataatggtacccaaggagagaaa
ggagacgtaggggccgttggttatgcaggaccaagaggagttaaaggagacaagggtgat
atgttcttacctacagaggaggagatgctgatgttgaagggtgacggtggagatacagga
aggagaggaaagaaaggacttaaaggccagtttggtatcccaggaagacctggtcgcgtg
ggaaaaacaggtccagagggacagactggaccagaggggcccgtgggaccacaaggtcca
ccaggtccatctggtggtggagagggtacctgtgagtgtgatcctgcagccttccctcct
gcattcttcccacccggagagaaaggatccatgggtgctcctggttctcctggtcccatg
ggtcctgatggtgtgcctggagctccaggtctacctggcgtgcaaggtctaagaggacta
caaggttatgcaggagaacctggtattgagggactggaaggaagaccgggtgcacaagga
gtaccaggagtgcctggaatagatggagcgaggggagaaaagggtgatccaggagatttc
tttgtgaatgacgaggtgtttattggaccaccaggggaacaaggtcttccaggcagagat
ggtcaaccaggacagagcatcaaaggagacaccggtgaaccaggtcacggcgctgaaggc
atgcctggtagagatgggcgtgatggttcccaaggtccccccggccccccaggaatgccc
ggtcatccaggcgaaccagcgtactacactggagatggaaatggtgaaaggggaccgaag
ggtgagcctggtgagccgggcagggagggccaatcaggtgccccagggttcgatggaaga
ccaggatctaggggcccacgtggaccacaaggacccactggctatggagaacaaggccca
ccaggggagcctggaactccgggtgagcctgggagaggaagcattgggcatttaggaggt
ggagattatgtagggatggccaggtttgccaccatccaggacatgctagatggcatgaga
gacctggaggtgggcactctggccttcatcatacgggtccaggaactctacatcagggtg
gagactggcatgcaacaagtactgctgggagctacctttaccttaccacctacctccgaa
ccacgcccacaaccacgccctcaaccacgcccacaaccatccattacatcgagaactact
actactacattaatacctaccaccactcttgcaccatttgtggatccaaccgagcctcct
cagatcccaggtccaggactaacagatagaacagaggagcctatccttccaggaccagaa
atacctgtatcagaccaacctatgctctacatgtatgccctaaatacaccccaagaggga
tacatgattggcggaatcagcggtgccgacttcaagtgctggaaacaagcgaaggcagca
ggactcaaaggaacgtatcgagccttcctctcatcccctctgcaagatatcaggactata
gtgaggaaacaggacaaaggattacccatcgctaacggaaagcaagaagttttgttcaat
tcttgggatgacatctttagcacggagaacgaagctccattccatgactccttccacata
tactccttcgatggtaaagatgttatgaccgatgaaacatggcctgataagtacatgtgg
catgggtcctacgccaacggtgagcgaatggccgagagtttctgtgaagcctggagagca
caaaatcattttgctcgcggtcaagctagtcctttatctgatcataaattattaggacaa
gatgagttcccttgtaacaacgcctttgctgttctatgtgtgcagacggctcgacctaat
gccaggaagtaa
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integrated database retrieval system
