KEGG   Strongylocentrotus purpuratus (purple sea urchin): 577011
Entry
577011            CDS       T01019                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03013  Nucleocytoplasmic transport
spu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    577011
  09122 Translation
   03013 Nucleocytoplasmic transport
    577011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spu03019]
    577011
   03041 Spliceosome [BR:spu03041]
    577011
Messenger RNA biogenesis [BR:spu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     577011
Spliceosome [BR:spu03041]
 Complex C
  Other components
   EJC/TREX
    577011
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    577011
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_1st ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_IFT140_1st WD40_RFWD3 eIF2A DSE1_N WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_HPS5 NBCH_WD40 Beta-prop_WDR35_TULP_N Tricorn_2nd RMC1_N PAC11 Beta-prop_WDR75_1st WDR90_beta-prop_4th CFAP251_N B-prop_COPA_B_2nd Beta-prop_ACSF4 Beta-prop_EIPR1 Beta-prop_SPT8 TRM82_WD Beta-prop_WDR41 Beta-prop_ELP1_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Cytochrom_D1 Beta-prop_DCAF4 PROPPIN
Other DBs
NCBI-GeneID: 577011
NCBI-ProteinID: XP_011662647
UniProt: A0A7M7HCD5
LinkDB
Position
Unknown
AA seq 321 aa
MATSIENTIRKHFEKNCRTKEHNGVHSSKVHSVAWNCDGRMLASGSFDRNVSVFSLDRDR
MTREATYKGHVGSVDQLCWHPRNPDVFVTASGDKTIRIWDTRSARSVASIATKGENINIC
WSPNEQYIAVGNKDDLVTFVDAKSNRILNEEQFKYEVNEISWNNDSDLFFLTNGHGCINI
LSYPDLKPLQELNAHPANCICIEFDPMGRFFATGSADALVSLWDVAELVCVRTFSRLDWP
VRALSFSHDGQLLASASEDLIIDVAHVETGEKVTEVHCESPTFTVAWHPKRYLLAFACDD
KDKYNRERDAGSIKLFGLPSD
NT seq 966 nt   +upstreamnt  +downstreamnt
atggcaacttccattgagaacacgattagaaagcactttgaaaagaattgtcggacaaaa
gaacataatggagtccactcatctaaagttcactctgtggcatggaactgtgatggcaga
atgcttgcatctggatcgtttgatagaaatgttagcgtattttcgctggatagagataga
atgaccagagaagcaacatacaaggggcacgttggcagtgttgatcaattatgctggcat
cctaggaacccagatgtgtttgtgactgcatcaggagataagacaatcaggatatgggat
accaggtctgccaggtctgtagcatctatagctacaaaaggtgagaacatcaacatctgc
tggagtcctaatgaacagtacatagctgtgggcaacaaggatgaccttgtgacatttgta
gatgccaaatctaatcgtatactcaatgaggagcagttcaaatatgaagtgaatgagatc
tcatggaacaatgacagtgacctcttctttctaaccaatgggcatggctgtattaacatt
ctcagctacccagaccttaagcctctacaagaactcaatgctcacccagctaactgcata
tgtattgagtttgacccaatgggcaggttctttgccacaggaagtgcagatgccttggtt
agcctatgggatgttgctgagctggtttgtgtcagaaccttctcaagattagactggcct
gtgcgtgcccttagcttcagtcatgatggtcagctcttagcatctgcttctgaagatctc
atcatagatgttgctcatgtagaaacaggtgaaaaagtaaccgaagtgcactgtgaatca
ccaacctttactgttgcatggcatccaaaaaggtacctgcttgcatttgcctgtgatgat
aaggacaaatataatagggagagggatgcaggaagcatcaagctatttggcctacctagt
gattga

DBGET integrated database retrieval system