Strongylocentrotus purpuratus (purple sea urchin): 577162
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Entry
577162 CDS
T01019
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
577162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
577162
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
577162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_8
TPR_1
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_11
TPR_12
TPR_17
TPR_9
TPR_6
ANAPC3
ARM_TT21_5th
TPR_20
COG4_N
ARM_TT21
ARM_TT21_C
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-GeneID:
577162
NCBI-ProteinID:
XP_030832787
UniProt:
A0A7M7SUT8
LinkDB
All DBs
Position
Unknown
AA seq
1547 aa
AA seq
DB search
MASGGGSKELKAALKKAKEAIKGKDFQQALEHSKHALSLDPKHYNALIFLGKSATELGQG
EEAEKAYREATDIDPKQTLAWQGLSALYEKIDIPKNLKQLVGVYQQLMKLSGDKSRETQI
AEKLADLYQKLTKPVEACGVLHSLLLKSEDTAYKIEKWSRIIGLLSQQKSLDESSDNLLK
EAYTVVLEESSTIEDESLKEFYKGYIGLQLKGKTVDIAELKATCSKMHEMFPTEIYPLEK
LTEIIMIETFAMKTSNDWSVYGELQELDSDNKWALIGQGQLKLTSQDFKATKELLTQASQ
KLPNFPLCWLFLAQCQLYLHDYRAAEQSAEQGRRTLKFYKHPALNEAIGLHEALRVLQGR
ACMDSGLMAKGLSAVEIFKKLLLEAADKDTMYKLLTEAHLLAGDIASAQQSFEMISYCLD
ESDTIALDGWLRFHQGDLSDAQKKLQIALAKEEKAIYHYWLGRVYWAMGGQAQQDKSKSS
LLKAAKLDINFSDSFLYVGHHYMQIGKDTVKAKRCYKKAYDLNPDNEAAAQALGDAYDLL
DEKEDAIAVYTAVTKRAALGGAKWAWLRLGLVQLRAGNATEAVECFQAVLRADPDDIHCQ
ECLAEAYLSRGSNTAALKTFSRIVEMDPNSTYALFKIGHIKQTVGLYSEAVADYQIILGK
TPDYVPALSGQGETYILMAKAALFDFFNARAVSYIQNAITVLTRAVLLRPDLCSLWKLLG
DACTLIAPLHDNLIRISVNGALTCGDEKICETLGKGELLALGGRCFGRAVQRQKDRASLW
HDLGMNYFRQHQYSQDAKMVQKAMQFIQKAIKLDESNHLHWTALGVVAASKAFDDPRLAQ
HAFIKSIQLEAKNVVAWTNLGTLYLTNGNLKLANQAFAVSQSLEPNHVQCWIGQGLVAET
LGRQEAIDLYRHTTELTTHVESGLGYADLVCSALLDPSLDKDSELYRYNVIQMGAVPAAA
AAVGKVADRLQVSGEAHTLHGLLQERQGLHRASEESYKQALHVLKNQGDEKQINIALSNH
GRALSSIGKAEEARDTLRSISPLVEIQDILQLALALYQNKEWQEAYMAYEQALQLVSSDC
ERSQILTALAMVSCQSGDLANAKTLLFQSSQLSAPSHQGLVALCALGLQTQDMVLTQAAL
SELAKQPNQQDLVQETAVLASATHYLQGDIPGVSQHLMNSVEEYPDDSHLWNLAAELMLL
LDATNTEFASTCSEKARRLIPTHKNVLQVNAAARLCSGCHGNSSRDRLYPSLIAAQKAVH
AMPGDMNNWALLGACCSAQSSWQHVHQEKCNLIDVNLRVAKFLLKTSKADSKLAAWVSLH
NVFCLLQSQQWNEAKELSERLLEWCNYGEEINANLTLLRTLSAWMATRKEGGLESLRSTV
TASQSSLAWQTLGKIYCESKMVAAAEACYKQCLTLTSGRGQIAILHQLAYQAILGLKAGD
DTGSWGDLAKQTVDELNKQAPKETTSCLLKGLLCKHLGNQRQSRRELQRGMESNEEPAAE
DYTRSVIRVHLVEALMKKDKEAAQVLVEEALEKKDPFSARLEELFSA
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggaggtggaagcaaggagttgaaagctgccctcaagaaagctaaagaagcc
atcaagggaaaggattttcagcaggcattagaacattctaagcatgctttgagcctggat
cccaagcattacaatgcattgatattccttggcaagtcagccaccgagctcggacaggga
gaagaggcagagaaagcatatagagaagcaacagacatagaccccaagcagacactagca
tggcagggtctgtctgccctctatgagaagattgatattcccaagaacttaaagcagctt
gtgggtgtctaccagcagctgatgaagctatcaggagataaatccagagaaactcagatt
gctgaaaagcttgcagacttgtatcaaaaactgaccaaacctgtggaggcatgtggagtt
cttcattcgctactcctgaagtcggaagacactgcctacaagattgagaagtggtccagg
attataggactcctatcccaacagaagtcacttgatgagagcagtgataaccttctcaag
gaagcatacactgtggtcttggaggagtcaagcacgatagaggatgagtcactgaaagag
ttctacaaggggtacattggcttacaactcaagggcaagacagttgatatagctgagctt
aaggcaacatgttctaagatgcatgagatgtttccaacagaaatataccccctggagaaa
ttgacagagatcatcatgattgaaacatttgcaatgaagacatcaaatgactggtcagtc
tatggtgagctacaggaactggacagtgataataaatgggctctgattgggcaaggtcaa
ctcaaactgaccagtcaggatttcaaggcaacaaaggaacttctaacccaggcatcacaa
aagctaccaaattttccactttgttggttattcttggctcagtgtcagctctatctccat
gactatcgagcagcagaacagtcagctgaacaagggagaagaactttgaagttctacaag
catccagccctcaatgaagcaataggattgcatgaagcattgcgagtcctccagggcaga
gcttgcatggactctggcctcatggcgaagggtctcagcgccgtagaaatcttcaaaaag
ctgctactggaggccgctgataaggacaccatgtataagctgttaactgaggctcatctt
ctggcaggggacatcgccagtgcacagcagagttttgagatgatttcttactgtcttgat
gagagtgatactatagctttggacggctggcttaggtttcatcaaggggacctctcagat
gcccagaagaaattacaaattgctctagccaaggaggagaaggcaatctatcactactgg
cttgggagagtgtactgggctatgggaggtcaagcacagcaagacaagtctaaatcatcc
ttgctcaaggctgccaaacttgacatcaacttctcagactcctttctgtatgttggtcat
cattacatgcagataggaaaagacacagtcaaagcgaaacgttgttacaagaaagcctat
gatttgaacccagataacgaggctgctgctcaagccctgggagatgcatacgacttactg
gatgaaaaggaggacgctattgctgtctacacagcagtgaccaagcgggcagctttgggc
ggggcaaagtgggcatggctaagactggggctcgttcagctcagagcaggcaatgcaaca
gaagctgtggaatgctttcaagctgttctcagagctgatcctgatgacatacactgccag
gaatgcctcgcagaagcttatttgagtagaggaagcaatacagcagcactcaaaacattt
agtcgaattgtagagatggacccaaactcaacatatgctttattcaagatcggtcacatc
aagcagactgttggtctgtactctgaggcagtggcggactatcagataatcctcgggaaa
acaccggactacgtgccagcactgagtggccagggtgagacatatatcttgatggccaag
gcagctttgtttgacttcttcaacgcaagagctgtctcctacatccagaatgccatcact
gtcttgacaagagccgtccttctccgtcctgacctgtgtagcttgtggaagctccttggg
gatgcctgcaccctgatagctcctctacatgacaatctcatcaggatctcagtgaacggt
gctctgacttgtggtgatgagaagatatgtgaaactttgggcaaaggagaactgctggca
ctgggtggaaggtgttttggtcgggctgtgcagagacagaaggatcgtgctagcttgtgg
catgacctgggcatgaactacttccggcagcaccagtacagtcaagatgcaaagatggtc
caaaaagccatgcagtttatccaaaaagcaatcaagttagatgagtcaaaccacttgcac
tggacagccttgggtgtcgtcgctgcatctaaagcttttgatgacccaagacttgcccag
catgccttcatcaagtccatacaactagaagcaaagaatgttgtagcatggaccaacctg
ggcacactgtacctcaccaacgggaatctaaagctggctaaccaagccttcgctgtctca
cagtctctcgaacccaatcatgttcagtgctggatcggacagggtctggttgctgagacg
ttaggcaggcaggaagcaatagatctctacaggcacaccacagagttgacaacccatgtg
gaaagtggccttggttatgctgatttggtatgtagtgcactcctagacccgtcactagac
aaggattctgagctgtatcgatacaacgtcattcagatgggtgctgtgcctgctgctgct
gcagctgtagggaaagtggcagatcgtctgcaggtgagcggagaggcccatacgctgcat
ggactcttgcaagaaagacagggtctacacagggcttcggaagaatcctataagcaggct
ctccatgtgttgaagaaccaaggagatgagaaacagatcaacattgccttgtctaaccat
ggtagagcattgagctccattggtaaggcagaggaggctagagatacccttcgttctatc
agtcctctggtagagatccaagacatcctgcagctggctctggccctctatcagaacaag
gagtggcaagaggcctatatggcttatgagcaagccttgcagttagtttcatctgattgt
gagagatctcagatcctgacagctctcgccatggtatcctgccagtctggagacctagcc
aacgctaagaccttgctcttccaaagttcccagctgtcagccccgtctcaccaggggcta
gtagccctctgcgctttaggactgcagacccaggatatggtcttgacccaagcagccctg
tctgagcttgccaagcagcctaatcagcaggacctggtccaggagacagcagtcctggcc
tctgctacgcactatttgcagggtgatataccaggagtttctcaacacctcatgaactca
gttgaggagtatcctgatgatagccatttatggaacctggcagcagaactgatgctactg
ctcgatgcaacaaatacagagtttgcatcaacctgttctgaaaaagcaagacgtctaata
cctacccacaagaacgttcttcaagtcaatgcagctgcaagactatgctctggttgccat
ggcaactcctccagagaccgtctgtatcccagcttgattgcagcacagaaagctgtccat
gccatgccaggtgatatgaataattgggcccttcttggagcctgttgttcagctcagtcg
tcatggcaacatgtccaccaagagaagtgcaatctgatagatgttaatcttcgagtggcc
aaatttctcctgaaaacaagcaaagcagattctaagctggccgcctgggtttctcttcac
aacgtcttctgcttgctacagagtcagcagtggaatgaagcaaaggaactctcagaacgg
ctgctggagtggtgcaattatggggaggagatcaatgctaatctcacgttactgcgtacc
ctgagtgcctggatggcgactaggaaggagggtggcctggaatcactcagatcaacagtc
acagcatcacagtcatcactggcatggcagacattaggtaagatctactgtgaatctaag
atggtggctgcggcagaagcatgctataaacagtgcctgactctcactagtggtagagga
cagatcgccatattacaccagttagcttaccaggctatcttgggtttgaaggcaggggat
gacactgggtcatggggcgaccttgcaaagcaaacagttgatgaactcaacaaacaggct
ccaaaggaaaccaccagctgcttgctgaagggattgctttgtaaacatctaggaaatcag
aggcaatcaagacgggagctgcagcgtggcatggagagcaatgaggagcctgcagcagaa
gactacacacggtctgtcataagagttcacttggtggaagcattgatgaagaaggataag
gaagctgcacaggtccttgtggaagaagccttagagaagaaagatcctttcagtgcaaga
ttggaggaattgttttcagcataa
DBGET
integrated database retrieval system
