Strongylocentrotus purpuratus (purple sea urchin): 577531
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Entry
577531 CDS
T01019
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
577531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
577531
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
577531
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
577531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
577531
NCBI-ProteinID:
XP_011667187
UniProt:
A0A7M7HE11
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MGDKRKLQGEIERCLKKVSEGVETFEDIWQKVLVHNATNSNQKEKYEADLKKEIKKLQRL
RDQIKSWAASNEIKDKRTLLENRKLIETQMERFKVVERETKTKAYSKEGLGLAAKVDPIQ
KEKDDVSLWMRGCIDKLTVQIDSFEMEVESITTSSKKRKIPTDRQERLDELATWLEKHRF
HIRQLETIMRMLDNSTIEVDQIKKIQDDLEYYIDCSQDPDFEENEFMYDELEIDDEGLEA
TSPDDEENHMDDDTPLSISPIVSSSLPSTSNHSKDIKPDEEKKTRTKSVDDTSLSSSPSP
RKGSAKSTSSSSSLNSIPMTTTTTTSSTTTQQSRPTITRVSSSPGTSTSNSSAAFGNLQP
STKNSLSKANSVPSATTPHAIAQPPSGPAYAVAAGGQTHNSQGPNPVANRVAAQLPTAVS
SHMMSNSMSLSSSTMVQSPSSNPQHNNTQQPRPDMNGPHQGFTTFDTPGYSIELITSSVA
NLSTNSTLSSSSSHNTHMSHGTVPSSSSSSITSSSSMPFMVSSLMPTPSSAVETNAVATA
LATSAAMLTKSPDSMVNGPLSPENKEDDSSSMSTLKNMAQKVVLSSGLENFQSDLISENM
AVYNSTSRSESQGQSTTPANSTPQYQETTIPPLLGVAPLGPVTLSKEQRLQQSVMESCFN
HLPLPSDSERLRNYLPRNPCPTPSYHCQVMPHRMGTLEFFMRLSTETLFFIFYYQEGTKA
QYLAAKALKRQSWRFHTKYMMWFQRHEEPKTITEEYEQGTYIYFDYEKWGQRKKEGFTFE
YRYLEDREL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaacgaaaactacaaggtgaaatagagagatgtctcaagaaggtcagtgaa
ggagtcgaaacatttgaagacatctggcagaaggtacttgttcacaatgctacgaatagc
aatcagaaggagaagtatgaagcagacttgaaaaaggaaattaagaagctccagaggtta
agagaccaaatcaagtcatgggcagcctcaaacgagatcaaggataagaggacactgtta
gaaaacaggaaattgatcgaaacgcaaatggaaagattcaaggtggtagagagagaaaca
aaaacgaaagcatactcgaaagaagggttagggttagcagccaaagtcgaccccatccag
aaggagaaagacgatgtctcgctgtggatgcggggctgtatagacaaactcacggtacag
atagactcgtttgaaatggaggttgaaagcatcacaacatcttcaaagaaaaggaaaatc
ccaacagataggcaagagagattagatgagctagcgacatggttagagaaacacaggttt
cacatcaggcagctggagacgatcatgagaatgttggataacagcacaatagaggtggac
cagatcaagaaaatacaagacgatttggagtactacattgactgctcgcaggatcccgac
tttgaggagaacgagttcatgtatgatgaactggaaatcgatgatgaaggtctagaagca
acctctccagacgacgaggaaaaccacatggacgatgacacgcccttgagtatttcaccc
atcgtcagcagcagtttgccctccacatcaaaccattccaaagatataaagccagacgaa
gaaaagaagacgagaacgaaatcggtggatgatacgtcgttatcctcgtcgccatcacca
aggaaaggttcagccaagagtacgagcagctcatcatcgttgaattccattcccatgaca
accactacaacaacatcatcaacgacgactcagcagagtagaccaacaataacgagagtt
tcatcgtcgccgggtacgtcaacgagcaactcctcagcggcgtttgggaacttgcaaccg
tcaaccaaaaacagccttagcaaagcaaatagtgtaccatcagcgacgacgccacatgca
atagcacagccaccctcagggccagcgtatgcagtagcagcagggggacagacacacaat
tcacaagggccgaacccagtagcgaatcgggtggcagcgcagctaccgacggcggtgtcg
tctcacatgatgtccaacagcatgtcgttaagcagctcaactatggtgcagtccccatca
tcaaaccctcaacacaacaacactcagcagcccagaccagatatgaacggcccccatcaa
ggcttcacaacttttgataccccaggttacagcatagagctgatcacgagtagcgtggcc
aacctctcgaccaacagcacactgtcatcgtcatcgtcccacaacacccacatgtcacac
ggtacagtgccgtcatcgtcgtcgtcttcaatcacatcgtcatcgtcgatgcccttcatg
gtgtcgtccttgatgcccaccccgtcatcggcggtggagaccaacgcagtagccactgcc
ctggccaccagtgcggccatgctgaccaagagccccgactcaatggtcaacggcccactc
agcccggaaaataaggaggatgacagcagctcaatgtcgacgctaaagaatatggcacag
aaggttgtcttgagttcagggctagagaacttccagtcggatctcatatcagaaaacatg
gcagtctataacagtacttccaggagtgagagccagggtcagtcgacgacgcccgccaac
agcacacctcagtatcaagagaccaccatccctccattactgggcgtggcacccctcgga
cccgtcacgctatccaaggagcagaggctgcagcagagcgtcatggagagctgctttaac
cacttgccgcttccgtcagactcggagaggttaagaaattaccttccgaggaacccgtgt
cccacccctagctaccactgtcaggtgatgcctcataggatgggcacgctagagttcttc
atgagactatcgacagagacgttattcttcatcttctactaccaagaaggaacaaaggca
caatatctggctgcaaaggctctgaaaaggcaatcatggagattccacaccaagtatatg
atgtggtttcaacggcatgaagagcccaagacaatcacggaggaatacgagcaaggaaca
tacatctactttgactacgagaagtggggacagaggaaaaaggaaggattcacgttcgag
tacagatacctggaagaccgagagctctga
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