Strongylocentrotus purpuratus (purple sea urchin): 577627
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Entry
577627 CDS
T01019
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
577627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
577627
Spliceosome [BR:
spu03041
]
Complex B
Other components
Prp19-related factors
577627
Complex C
577627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
SLFN-g3_helicase
AAA_16
AAA
UvrD_C_2
Parvo_NS1
RecA
AAA_22
PhoH
DnaB_C
Motif
Other DBs
NCBI-GeneID:
577627
NCBI-ProteinID:
XP_003725465
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MMSGSQKGKSFAPTVQQLNADFLTQLGSRFWAPNSPTPHMPYDPNVIEDVYKKELLKNKF
AVRRIMVLEFSQYLENYLWPNYDSEKSTSSHLISIAVMINEKFREGVSAWEACKKKPEQF
PAFFRQVLELTLGSLKDQTISLRERTVLLIFLIHCFNSLEVDVIREQVQRLVSLPMWVCL
LPGRLEAELKAYPKYKKFWKIIMKNDAKLDDETKKRNDFERRFLANLIQLFYTILDSIQE
EGDAAMDKVHFCERFVEMMVDLEAQLPTRRFFNAVMDDAHVVVRCRLSALAKRKEGKLFS
ELLDMLTFYAGFEIKDSTGTALTDHEMTDIHYDRISSLQRAAFKLFPELKRFAMSNVASI
DTRKTLTKHFTQLSASDLHHFAAFLHLLPPLGDDEETTVEKTFLLDLMVSHHERRISQIQ
SLNETPLYPTEEILWDENVVPTEYYSGEGCLALPKLNLQMLTLHDYLLRNFHLFRLESTY
EIRQDVEDAVLRMKPWKAEDGSCFFGGWARMAQAITSFSVVEVSKPNIGENHPGSVRADI
TLTLNLRQHIKSEWESLRKHDVAFLVTVRPTKRIGSTFNNNKNKNNKNKEDFIDQVGIAY
VRGCEVEGLLNEKGEVIEEGPEPKPDFTGITRTYRVWLDSNQYQKDMAKTASSGTEDVYE
SFNIMMRRKPKENNFKAVLETIRDLMNTDCVVPDWLHDILLGYGDPGAAHYSKMTKQIAT
LDWNDTFLNADHLRASFPDHSVKLMTNDPAKLVPPFRITFPDAEKGGSSGKKRKNEDTSQ
TKAKKEIIVEPHIIPNRGPYPYNQPKKNAIQFTPTQVEAVRAGMQPGLTMVVGPPGTGKT
DVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIIALDIDERHLLRLGHGEEALETEK
DFSRYGRVNYVLGRRLELLKEVERLQESLGVPGDVSYTCETAGHFYLYQVVARWEKFLSK
VKPKGGKEVAVEDIVTHFPFHKFFENAPQPVFKGETYVQDMDIAEGCYRHIKKIFQQLEE
FRAFELLRSGKDRSKYLLIKEAKIIAMTCTHAALKRRDLVDLRFQYDNILMEESAQILEI
ETFIPLLLQNPEDGFNRLKRWIMIGDHHQLPPVIKNMAFQKFSNMEQSLFTRFVRLGVPT
VDLDAQGRAKPSIATLYNWRYRNLGNLPHVKRMPEFQTVNPGLAFDYQLINVDNFNGVGE
SEPNPYFYQNLAEAEYVVALFMYMRLLGYPAEKISILTTYNGQKHLIRDVINKRCSDNPI
MGQPHKVTTVDRFQGQQNDYILLSLVRTRAVGHIRDVRRLVVAMSRARLGLYVFGRVSLF
QNCYELSPTFRNLMSRPIHLHLVPSETYPPQRKIGQPPHGGAMVIEDMAHMAGFVYEMYN
DRMQRMHAQIGRQRRIERLAKPPVSHKPPGSHKPPAKKVEEPMETEPVEEANKEVADAKE
EEVDHSKMPEHPGESSSESEGEDDKETQVMQGQAEKTKGNDDEDKETQDIQGQAVAETTV
EKAKSDETEKMEET
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtggcagtcagaaaggcaagagttttgctcctacagtgcagcagctgaatgca
gatttcttgacacagcttggcagccgattctgggctccaaacagccctacaccacacatg
ccctatgacccgaatgtgattgaagatgtctacaagaaagaactcctgaagaacaagttt
gctgtacgtcgtatcatggtgcttgagttcagccaatacctggaaaactacctgtggcca
aactatgactctgaaaagtccacctccagtcatctgatctctattgctgtcatgatcaat
gagaaattcagagaaggagtgtcagcttgggaggcatgcaagaaaaaacctgagcagttt
ccagctttcttccgtcaagttctagagcttactttgggttcgttaaaggatcagacaatc
tcactgagagaacggacagtgcttctcatcttcctcattcactgctttaacagtctggaa
gtggatgtaatacgagagcaagtccagaggcttgtatccctacccatgtgggtgtgtctc
ctaccgggaaggcttgaagctgagctgaaggcctaccccaaatacaagaagttctggaag
atcatcatgaaaaatgatgccaaactagatgatgagacgaagaagaggaacgactttgag
cggaggtttcttgctaacttgatccagcttttctatacgatattggactccatccaagag
gaaggtgatgctgcaatggacaaggtccatttctgtgagcgctttgtggagatgatggta
gatctagaggctcagcttccaacgaggaggttcttcaatgctgtcatggatgacgcccat
gtagtcgttcgatgtcggctgtctgcactagcaaagaggaaggaaggcaagctgttcagt
gagctattggacatgctgacattctatgctggatttgagatcaaggattccacaggaaca
gctcttacagaccatgagatgactgatatacactatgataggataagctctctccagaga
gctgccttcaagctctttccagagctgaagagattcgcaatgtcaaatgttgctagtatt
gatacaaggaagacactcaccaagcactttacacaactaagtgcatcagacctgcatcat
ttcgctgccttcttgcatctgctgcccccacttggtgatgatgaggaaaccacagtagag
aagacattccttttagatctcatggtttcccatcacgagagaaggatctctcaaatccaa
tcattgaatgagacacctctctacccgacagaagagattctttgggatgagaatgtggtt
cctactgagtactactctggggaaggttgccttgcccttccgaagctgaatcttcagatg
ctcactctccatgactacctgctaagaaactttcatctcttcagactagaatccacatat
gagattcgacaagatgtagaggatgcagtgctgagaatgaagccctggaaggctgaagat
ggtagctgcttctttggaggatgggcacgtatggcacaggcaattacatcgttctcggta
gttgaggtttctaaacccaacattggtgagaaccacccaggcagcgtgagagctgatatc
accttgaccctaaacctccgtcaacatatcaagtcagagtgggaatcactgaggaagcat
gatgtagccttccttgtcacggtccgaccaaccaagaggattggtagcaccttcaacaac
aacaagaacaagaacaacaagaacaaggaggacttcattgaccaggttggaatcgcctac
gtccgagggtgtgaggtagaggggcttttgaatgaaaagggagaagtgattgaagaaggt
ccagaacccaagccagattttacaggtatcaccaggacatacagagtatggctggactct
aaccagtaccagaaggacatggctaagacagcgtcttctgggacagaggatgtctatgag
agcttcaatatcatgatgagaaggaaaccaaaggaaaataacttcaaagctgtactggag
acaatccgtgacctgatgaacactgactgtgtagtacctgactggctacatgacatccta
ctggggtatggagacccaggagcagctcactactcaaagatgaccaagcagattgcaact
ttggactggaatgacaccttcctgaacgctgaccatctcagggctagcttcccagaccat
tcggtcaagttgatgacaaatgacccagctaaactagtgcctccttttaggataacattt
ccagatgctgagaaaggaggttcttcagggaagaaacgcaagaatgaggacacctctcag
acgaaagccaagaaagaaatcattgtggaaccccacatcatccctaaccgaggcccttat
ccatacaaccaacctaagaagaatgcaatccagtttaccccaacacaagtagaagccgtc
agagctggcatgcaaccaggccttacaatggttgttggacctcctggaactggtaagaca
gacgtagctgttcagatcatctccaatatctatcataacttccctgagcagaggaccctc
atcgtcacacattccaaccaggctctgaaccagttgtttgagaagatcatcgcattggat
atcgatgagaggcatctgttgaggttgggtcatggtgaggaggcactggagacagaaaaa
gatttcagcaggtacggtcgtgtgaactatgtgcttggtcgtcgcctggagctgctcaag
gaggtggagaggttacaggagagtcttggagttcctggtgatgtgtcatacacctgtgag
acagccggtcacttctatctctatcaggtggtggcacgttgggagaagttcctgagtaag
gtgaagcctaagggtggtaaggaggttgcggttgaagacattgtcactcacttccctttc
cataaattctttgagaatgccccccagccagtattcaaaggggagacctacgttcaggac
atggacattgcagagggctgctaccgccacatcaagaagatcttccaacagctcgaggaa
ttccgagcatttgagctactgcgaagtgggaaagaccggtccaagtacctcctgatcaag
gaagccaagatcatcgccatgacgtgtacgcatgctgccctcaagagacgagacttagtc
gatcttaggttccagtatgataacatcttgatggaggaatctgctcagattctagagatt
gaaaccttcatccctctgcttcttcagaatcctgaggatggtttcaatcgattgaagcga
tggatcatgatcggtgatcaccatcagcttccacctgtcatcaagaacatggcctttcag
aagttctccaatatggagcaatctctcttcactcggtttgtcaggttaggggtgcctacc
gtagatctggatgctcaggggagagctaaaccaagcattgccacactgtacaactggagg
tatcgtaaccttggcaacctgcctcacgtgaagaggatgcccgagttccagaccgtaaac
cctggcttggcctttgactatcagctcatcaatgtcgataacttcaatggagtgggggaa
tctgagcccaatccttacttctatcagaacctggctgaagcggagtacgtggtggcgctc
tttatgtacatgaggttgctaggatacccagctgagaagatcagcatcctcactacatac
aacggtcagaagcatctaatccgtgatgtcatcaacaaacgatgctcggacaacccaata
atgggtcaaccccacaaggtgacgacagtggatcgtttccaggggcaacagaatgactac
atcctcctatcactagtcaggacgagggcagttggacacatcagggacgtgaggaggctt
gtggtcgccatgtccagagccagacttggtctctatgtctttggcagggtttccctcttc
cagaactgctatgagctatcaccaacattccgaaacctgatgtcaagaccgattcatctt
catctagttccatctgagacatacccaccacagagaaagatcggccagcctccacatggt
ggtgccatggtgatagaagacatggctcacatggctgggtttgtctatgagatgtacaat
gaccgcatgcagaggatgcatgcacagatagggcgccaaagaagaatagaacgtctagcc
aaacctccagtgtctcacaaaccccctgggtctcacaaaccccctgcaaagaaagtggaa
gaacccatggagactgaacctgttgaagaagccaataaggaggtggcagacgcaaaggag
gaagaggtggaccattccaagatgccagaacatccgggggagagcagtagtgaatcagag
ggagaagatgataaggagacgcaagtaatgcaggggcaggcagagaaaacgaagggaaat
gatgatgaggataaggagacacaagacatacaagggcaggctgtggcagaaacaacagtg
gagaaggcaaaatcagatgagactgaaaagatggaagaaacttaa
DBGET
integrated database retrieval system
