Strongylocentrotus purpuratus (purple sea urchin): 578194
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Entry
578194 CDS
T01019
Name
(RefSeq) structure-specific endonuclease subunit slx1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
578194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spu03400
]
578194
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
578194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H_2
Prok-RING_1
zf-HC5HC2H
PHD_NSD
FANCL_C
PHD
T5orf172
zf-RING_2
zf-4CXXC_R1
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
578194
NCBI-ProteinID:
XP_030847626
UniProt:
A0A7M7T1T2
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MSGDMSHDNDNLPSSRKETILNVKMAKEVENFNGCYCLVSTNPRYKGWTYIGYTVDPKRR
VGQHNKGSKFGGAYRTSGKGPWDMVLIIFGFPNEITALRFEWAWQHPTKSRRLRHIPRKT
GKETAFQYRFRVVSNMLRVGPWCRLPLTVQWLMQEYKQEFDVRLQPPSHMPISYGQVTST
KVGGYGNPRRMKKRKGKKDKSSDSQNLSEEDDDVEAIPSSQTAGKRCIICGKRFQDDETM
LTCLYPSCKAEYHMICVSKRFLKNDPDQLLPIEGSCPSCKEVVLWGDLIRKKQGCYAKLA
EISEEDESDHWAEDLRST
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgacatgtcacatgacaatgacaaccttccctcatcgcggaaagaaacaatt
ctgaatgtgaaaatggcgaaagaggtcgaaaatttcaacggttgttattgtctggtcagc
accaatccacgctacaagggatggacatatattggttatacagtggatccgaagagaagg
gttggtcaacacaataaaggttccaaatttggaggtgcatacagaacaagtggaaagggt
ccttgggatatggtgttaataatatttggctttccaaatgaaattacagcactaagattt
gaatgggcatggcagcacccgacaaaatccaggcggctgcgccacattccccgaaagacc
gggaaggagacagcctttcagtaccgcttccgggtcgtctccaacatgctgcgtgtcggg
ccctggtgtcgtctccctctcacggttcagtggctcatgcaggagtacaagcaggagttt
gatgttaggctacagcccccaagtcacatgcccatatcgtatggtcaggtgacaagcacg
aaggttggtggttatggaaacccaaggagaatgaaaaagaggaaaggtaaaaaggacaag
agttcagattctcagaatttatctgaagaagatgatgatgtggaagccattccttcaagc
caaactgcaggcaaaagatgcatcatctgtggaaagagattccaggatgatgagactatg
ctgacttgcctttacccatcatgcaaagcagagtatcacatgatatgcgtgtcaaaacgc
ttccttaaaaatgatcctgaccaacttctgcctatagagggctcctgtccatcctgcaag
gaagtggtcttgtggggtgacttgattaggaagaagcaaggatgctatgcaaagttagca
gagatatcagaagaagacgaatcagaccactgggccgaggatcttagatctacatag
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