Strongylocentrotus purpuratus (purple sea urchin): 578334
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Entry
578334 CDS
T01019
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
578334
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
578334
Spliceosome [BR:
spu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
578334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
Ank_2
AAA_19
HA2_N
AAA_22
Ank
ATPase
nSTAND3
PhoH
Ank_5
ABC_tran
FtsK_SpoIIIE
PAM2
Ank_4
ResIII
AAA_23
T2SSE
AAA_7
AAA_29
Pox_vIL-18BP
Lumazine_bd_2
Motif
Other DBs
NCBI-GeneID:
578334
NCBI-ProteinID:
XP_030832690
UniProt:
A0A7M7N831
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MGDRGRNKPRKHKKEICVGEEFKISVDLAIQEFRHDESETVLEFPASFSNNERAYIHRLA
ISCGLKSKSKGKGSNRYLTLIKKSVNRMDDDGEDDGSPVFQMGAATCNELQGLLQQFPVT
AKERQELQPKVERRRFGPSEANPAREMNKATGRLNSSLPQVPSKRNKSDLDSFRQTLPVF
AMQNEILSTINNNKVVLIVGETGSGKTTQLPQFILDECFEMNRPCRIICTQPRRISALSV
SERVASERGEAIGQTVGYQIRLESRVSPKTLLTYCTNGVLLRTLMTGDAALDVITHVIID
EIHERDRFSDFLVTQIRDLMVRKRHLTLILMSAALDVQLFIRYFNNCPVVSVPGNMYDVE
ELFLEDALKCTRYSTPKMVEYQKEKGKVAKQQQQLTKWYTADQVGGASASKSQPMAPVHP
SVDSLSRDFQGTSMGPSAADTSIDVEDMPEWLVHDMDSAISDCWKTGDNDYFSQLLYLLL
NENVSVDYAHSESSVTPLMVGAGRGKVEMVEQLLSLGANASLKASDERTALDFARMFNQT
EVVDLLQAYLDTVQASNEDESELLRNHIEVSTEDRELLQAYHHSFDDERVDLNLVLALLD
YICSHSQEGAILVFLPGYDDIVSLRDMLLQDDTFSDRQSFQIYTLHSSMQSHDQKKVFKT
PGAGIRKIVLSTNIAETSVTINDVVFVVDSGKVKEKSFDAIANISSLKSNWISKASAKQR
RGRAGRVRPGMCFHMISRVRFQSLPDFQVPEILRTPLHELCLHTKLLAPNETSIGDFLKR
APEPPSTIAIKNAIGLLKSIDAMDKWEDLTELGCHLADLPVDPRLGKMVLYAIVLKCLDP
VLTIVCALAYKDPFVLPSHPSQKRAAMQVRKKYTSNTFSDHMALLRAFQSWQRARSDGWE
GTFCDRNFLSRATMEMIVGMRTQLLGQLRASGFVRARGPGDIRDLNTNSENWAVVKASLC
AGMYPNILKVDRERRQLTTKTESKVRFHPNSVLHEVTKGKTSLSEEHMRTVDSLPSDWLL
YDELTSSHFRTSVRCVTLISPITIALVCGPARLPYDALVLPEGTASSMATRMGPNGDAAA
NDSSEGEDDDYRVAKATLKLDEWLVIKSESQAASLVLQLRTKWHTLFMRRMRTPAKPWSQ
ADEAVLKTLIKVLTNEEQSLGLQQPVGVGQRPKPMAIEQFNSPPSGSMSNRFANSQGKSR
GNWRANDQRQGGQYSGRGGGGGGRPQPPSSPSYQQTNSGYRGQNQGQGQGQGGNWRQSPT
SRGGHAGRWNNSQRTPPRNSMFPDNHQQQQRGASGNSHVPWSTQDGSSFNPMAHSSPAFQ
TGPQSFKPSSSKSDRVSPVPYGSGRDSSRGGRKGSPGGGGKGSRLNVNAKEFQGSGYKPK
GGVRPPPGFSQF
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgggggacagagggagaaataaacctaggaagcacaagaaagaaatatgcgtcggggag
gagttcaaaatttctgtagacttagctatccaagaattcaggcatgacgaatcagagaca
gtccttgagtttccagcttcattcagcaataatgagagggcatacattcatcgtcttgct
atctcctgtggtctcaaatcaaagagtaaaggcaaggggtccaatcgttacctgacccta
atcaagaagtctgtcaacaggatggatgatgatggagaggatgatgggtcccctgttttc
cagatgggagcagcaacttgcaacgagttgcaggggttgctgcaacagttcccagttacc
gctaaggagcggcaggagttgcagcccaaagtggagcgtagaagatttgggccaagtgaa
gccaacccagctcgcgagatgaacaaggccactggacgtctcaacagcagcctgccacag
gttccttctaaaagaaacaagtcagaccttgacagcttccgtcagaccctaccggtcttc
gcaatgcagaatgaaatcctttcaaccatcaataacaacaaggtagtcctaatcgtaggc
gaaactggatctggcaagacaactcagcttccccaattcattttggacgagtgctttgag
atgaatcgaccatgtcgcatcatctgtacccagcctaggcggatatcagcactatcggtc
tctgagagggttgcgtctgagagaggagaggccattggacagacagtgggttatcaaatc
agactagagagcagagtttcaccgaagaccctcctgacatactgtaccaatggtgtgctc
ctgagaacccttatgacgggagatgcagccctcgatgtcatcactcatgttattatcgat
gaaattcacgagagggatagattcagcgacttccttgtgacccagatcagagacctgatg
gtacgcaagagacatctaacactcattctcatgagtgctgcccttgatgttcagctcttt
atacgctacttcaacaactgtcccgtcgtctcggttccgggaaatatgtatgatgtcgaa
gagctctttctggaagatgccttgaagtgtactcgatactctactccaaagatggttgaa
tatcagaaagaaaaaggaaaagttgccaagcaacagcaacagcttaccaaatggtacaca
gcagaccaagtgggtggagcctcggcaagcaagagccaacccatggctccggtccacccg
tcagtagactcattatcaagggacttccagggaacctctatgggaccatctgcagctgat
acatctattgacgttgaggacatgcccgagtggttagtccatgatatggatagcgccatc
tcagactgttggaagacaggcgataacgactacttctcgcaactcttgtacctgctactc
aatgagaatgtcagtgttgactacgcccactctgagtccagcgtgacccctctgatggtt
ggagctggacggggcaaggtagagatggttgagcagcttctaagccttggtgcaaatgct
tctctcaaagcatcggatgaaaggacagcattggattttgcgaggatgttcaaccaaaca
gaggtggtggatcttttgcaagcatatctggacactgtccaagccagcaacgaggatgag
agtgagttactgaggaatcacatcgaagtgagtaccgaagacagagagcttcttcaagcc
taccatcacagctttgatgacgagagggtagacctgaatctggttcttgctctcctggac
tacatatgcagccactcacaagagggtgccattctagtcttcctgcccggctatgatgac
atcgtctccctacgtgacatgttactacaggacgatacctttagtgatcgtcagtccttt
cagatctacactcttcactccagcatgcagagccatgatcagaagaaagtcttcaagaca
ccaggtgcaggcatcagaaagattgtcttgtcaacgaacatagcagagaccagtgtgacc
atcaatgatgtagtcttcgttgtagactctggcaaggtcaaggagaaatcctttgatgcg
attgctaatatctcatcactgaagagcaactggatctccaaggctagtgccaagcagaga
aggggaagagctggtcgtgtacgtccaggcatgtgcttccatatgatcagtagagtgcgc
ttccagagtctaccagacttccaggtcccagagatcctgaggacaccattacatgaactc
tgccttcacaccaaactgcttgccccgaatgagacatcaataggtgacttcttgaagagg
gctccagagccaccctctactatagctatcaagaatgccatcggccttctcaagtccatt
gatgcaatggataagtgggaggacctgaccgagctgggctgccatctagcagacctaccc
gtagaccctaggctgggtaaaatggtcctctatgccatcgtcttgaagtgccttgatcca
gtcctcactatcgtgtgtgctcttgcctacaaagatccatttgtgcttcccagccaccca
tctcagaagcgtgctgccatgcaagtgcgcaagaagtacacttccaacacattcagtgat
cacatggccttactcagggcattccagtcctggcagcgagcccgtagcgatggctgggaa
gggaccttctgtgataggaacttcctttcaagagccaccatggagatgattgtaggaatg
aggacccaactgttaggtcagctcagagcatccggcttcgtgagagcaagaggaccggga
gatatccgtgatctgaacaccaactctgagaactgggcagtggtcaaggcatccctgtgt
gctggcatgtatcccaacattctcaaggtggacagagaacgcagacaactcaccaccaaa
actgagtccaaggtacgcttccatcccaactctgtactccatgaggtgactaagggcaag
acatccctgagtgaggagcatatgagaacagtagatagcctaccgtcagactggctccta
tatgatgagctcaccagctcccacttcaggaccagtgtccgatgtgtgaccctcatctct
cccatcaccatcgccctggtctgtggccccgcccgtctaccttacgacgccctggtccta
ccggaaggaaccgcctcctccatggcaaccaggatgggacccaatggagatgctgctgcc
aacgactccagcgaaggagaggatgatgattacagggttgccaaggcaacgctcaagctg
gacgagtggttggtcatcaagtctgagtctcaggcagcgagcttggtcctgcagttgagg
accaagtggcatacattgttcatgagacgaatgagaactccagccaagccttggtctcaa
gctgatgaggctgtgctgaagacactgattaaagtactgaccaatgaagaacaatcactt
ggtctccagcagccagtaggagtgggacagagacctaaaccaatggcaatagagcagttc
aacagccctcccagtggcagtatgtcaaatcgctttgcaaattcacagggcaagagcaga
ggaaactggagagcgaatgatcagaggcagggaggccaatacagtggtagaggtggtggt
ggtggtggtcgaccccagcccccatccagcccctcctaccagcagaccaacagtggttac
aggggtcagaaccaaggtcagggtcagggtcagggaggaaactggagacagtcacccaca
tcaagaggaggtcatgctggaaggtggaataactcacagagaaccccaccaaggaactcg
atgtttcctgacaaccaccagcagcagcagagaggtgcttcaggtaactcccatgtcccc
tggtccacccaggacgggagcagcttcaaccccatggcccattccagccccgccttccag
actggtcctcagtccttcaaaccctcttcttccaaatcagacagggtctcccccgtaccc
tacggcagcggtagagactcctcccgtggtggtaggaagggatctcctggtggtgggggt
aagggaagtcgccttaatgtcaacgccaaggagttccaagggtcaggctacaaaccgaag
gggggcgtccgtccaccccctggtttctcacagttttaa
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integrated database retrieval system
