Strongylocentrotus purpuratus (purple sea urchin): 578790
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Entry
578790 CDS
T01019
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13191
RNA-binding protein 16
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
578790
03041 Spliceosome [BR:
spu03041
]
578790
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
578790
Spliceosome [BR:
spu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
578790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
578790
NCBI-ProteinID:
XP_030850467
UniProt:
A0A7M7PED6
LinkDB
All DBs
Position
Unknown
AA seq
1659 aa
AA seq
DB search
MEAVKHFNNELSSLYEVKPPISRAKMTSVTKSAIKAIKLYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGAEKDVFAPRFLKNIHATFLHLFKCPTDDRAKIVRVLNLWQKN
VVYGEDVIQPLLDMANPGSGGGAVAHVVKTAAPAPAPVNAAAAMAPAAVKQEKGAADVGS
WLSKHSEAAEQVQQQQQQIEQLQLLQKQLQKQSQAPKATPGIDTSLLSQMQTLTSQLNVL
TNQAWAGDAAAVKVEKAAPAQASNTNSKPSSGFNKALLDFDYGDEEDEVQIVKKDSTPSA
STMIPSLQASLEAVQRLTHQLQQAESHDNVKPQTAYPDPQQQHYQPDGDNIIAAPEPGEI
EAEHGQEEADGRGEYYQSEEVEEYRQEESSSSSAKRSRRDRSRSHTPKKSRRSRSRSRSR
SRSTSRSRSKSRSKRKRRSRSRSRSRKRRSRSRDRKDRDRDRDRDRDSDRHSDRHRDKER
DKEREREERKKEKEEEERQRERQKEREKKGLPSMKDKHLSVCSTTLWLGRLAKSIAESDI
RTLIAEYGEIISVEIIGTRGCAYVCMAKRQEAHKTLKKIKDVRLHGNNLKVAWALGKGMK
DANYKEYWDVEKGVSYIPWDELPSSGNYEVIAQGAMIDEETMPPEVKEAKVAHAAALKAA
EEAAASASAAAAAATTVAPAPLPPMAAVAAVPAPPLPGMPVMMPGQPSISVAPGVLPAGS
QVSAMAPIPSLMPPMGTQPQVASTVAAPAAVPAPHMVRMPVMPGGVFPPFVGFGQLATQG
YRFPPGFVPGQPPPMGVPPPARMMHPSGIPPAMQPSIPNVSQATAVGAVPQEAQKPPPGI
SPGVAEPKMEPREDATPANISMAGLTGSMVTSQPSFVMTGGIRPRFNLPGLVQQGLIMNP
GMMPGQRMPPPRTTMFQPMPSAASITAASVANSIRPIQSLLNNANLLGLTPQALEAIQKT
VSEATAVKSEPPKLHGILKNARPQPVQMRPGLGAPPRPFLVPGIRGMRPVGLAALPNSGQ
GDNQQLGAEPKDASAVGQPDRQDKPNLPEMGGSMGPRPGMPDRQGLGNRGAVRGNSDRGT
GEKSDDQEVGLDKLQMMFGDRPGLRPDMAGMQRFRLPGPGMQARPMRPEFGDVNRFAGPA
LRMLRPILGQQMMHRGIPPGMQIRVGPPMQNVRMAGPSGGVQYPPNSGMRMPPPGMGNPR
GPLPGMMRPQGMPPPNQGLPPTNQGMPQPNQGMPPSNKGMPPSNQGMPPDMNDPPKRPGQ
NVPPLLPDKPEGQNRREEDLRRQSGAPSRWSNATPDEGNKFPSRWQDGNQPEWRNRNRGN
NDQGGREGSSGAGFGRDVDMRMNEGPRDREFRRPDEGDHQGRDWRRDRGDRDDRFTRDRD
DRYSRHDRDSDKEKERDRGWQDRERDRNRDRDRGRDRDRDRESNRDWRDRGDRERDYRRD
RNRERDSGREAPPGDSAEWKPPGKEPPPQSTEADQSTSAEGAVPDASASAPGLPQEAIMK
PSDTPQAMLPAQPFEAAEPRQPSFEEEDSYEPDKPTEDTEPAYPEMSSAAIPPSVPSPEE
PMEDLGGAPGDVPGVADMPQEPVDDSTKPEPARPYPESPVHEQAPPPDLGMPASPDMPAS
PDMPQAAAEPAPTETAQVESEQSKPEAGQSEAEENPEES
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgtaaagcatttcaataatgagctgtccagcttgtacgaggtcaagccgcca
atctcaagggcgaagatgacctctgtgaccaagtctgccatcaaagcaatcaaactctac
aagcatgttgtgcagagtgtagaaaagtttatacaaaagtgtaaaccagaatacaaagtt
ccagggctctatgtcattgattccatcgtgcggcaatctagacaccagtttggagcagag
aaagatgtctttgcacctcggtttctaaagaacatccacgccacgttcctgcacctgttc
aagtgtcccacagatgaccgcgccaagattgttcgagtgctcaacctttggcagaagaat
gtggtttatggtgaagatgtcattcagcccctcctagacatggcaaacccaggtagtgga
ggcggagctgtggcacatgtagtaaagacagcagcccctgcccctgccccggtcaatgct
gctgctgccatggcgcctgcagcagtcaaacaggagaagggcgcagcagatgtaggctca
tggctctccaaacatagtgaagcagcagaacaagtgcaacaacaacagcagcagatagag
caactccagctcttgcagaagcagctccagaagcagtcccaggcgcccaaggccactcct
ggcattgacacgtcccttctcagtcagatgcagaccttgaccagccaactcaatgtcttg
accaaccaagcatgggctggggatgccgcagcggtcaaggtggaaaaggccgcaccagcg
caggccagcaatacaaactccaaacccagctcagggtttaacaaggctttacttgacttt
gattatggagatgaggaagatgaagttcagattgtcaagaaagatagcactccctcagca
agtaccatgatccccagccttcaggctagcttggaggcagttcaacgcctcacccatcag
ctgcaacaggccgagtcccacgataatgtcaagccacagacggcataccctgatcctcag
cagcaacattatcaaccagatggggataacatcattgcagctccggagccaggggagata
gaggcagagcatgggcaagaggaagcggatggtagaggggaatactaccagtctgaggag
gtggaagagtacaggcaggaggagtcatcctcctcctcagctaagagatctaggagagac
aggagcagatcacatactccaaagaagagcaggcgttcacgaagcaggtcacgctcaaga
tccaggtctacctcccggtccaggtccaagtccagatcaaagcggaaacgacgatcccgc
tccaggagtcggtcccgcaagcgaagatcgcgctctcgtgaccgcaaggaccgtgaccga
gaccgcgacagggacagggatagtgacagacatagcgacagacatcgggacaaagagagg
gataaggagagggaacgagaggaacgaaagaaggagaaagaagaggaggaacgccagagg
gagagacagaaggaaagagaaaagaagggtcttccatccatgaaggataaacatcttagt
gtgtgcagtacaacgttgtggttaggtcgactggccaagagcattgctgagtcggacatc
agaacacttattgcagaatatggagagatcatctcagttgagatcattgggactagagga
tgtgcctacgtgtgcatggcaaagagacaagaggcacacaaaactctcaagaaaatcaaa
gatgtgagacttcatggcaataacttgaaggttgcctgggcccttggtaagggaatgaag
gatgctaactacaaggaatactgggacgtggagaagggtgttagttacatcccttgggac
gagctgccgtccagtggtaactacgaggtcattgcccaaggagccatgatcgatgaagag
accatgcctccagaagtcaaagaagccaaagtggcacatgcagcagctctgaaggcagca
gaagaggcagcagcttccgccagtgcggctgctgctgctgccaccaccgtagcacctgcc
ccactgcctcctatggctgcagtagccgctgtccctgcccctcctctaccaggcatgccc
gtaatgatgccaggccagccttccatctctgtcgcaccaggtgtccttccagcaggcagc
caggtatctgccatggcacccataccatcactgatgccacccatggggacccagccgcag
gtagcctcgactgtcgccgctccagcagctgttcctgcaccccacatggtgcgcatgcct
gtcatgcctggtggtgtcttcccaccgtttgttggattcggtcaattggccactcaaggt
tacaggttccctccaggttttgttccaggacagccaccaccaatgggtgtgcctcctcct
gcaagaatgatgcatccatctggaataccaccagccatgcagccttcgattccgaatgtc
agtcaagcaacggcggttggagcagtgcctcaagaagcacagaaaccaccaccaggcata
tctcctggagtggcagagcccaagatggaaccaagagaagatgctacacctgcaaatatt
agcatggcaggattaacaggctcaatggttacatcgcaaccttcgttcgtcatgacgggt
ggtataagacctcgtttcaacctaccaggtttagtgcaacagggtttgattatgaaccca
gggatgatgccaggacaaaggatgcctccacccagaacaaccatgttccaacctatgcct
tcggcggcgtctatcacagcagcttcggtagcgaattcaattcgtcctatccagtccttg
ctgaataatgcaaatctacttggtcttaccccacaggcattggaagcaattcagaagaca
gtttcagaggctactgctgtgaagtctgaacctccaaagttgcatggcatcttgaagaat
gcaagaccgcaacctgtccagatgcgaccaggattaggggcacctcctaggccttttctt
gtacctggtattagaggaatgagaccggttggtcttgctgcactaccaaactctggccag
ggagataaccaacaattaggagctgaacctaaagatgcctcagcagttggacaaccagat
aggcaagacaaacccaatttgccggaaatgggagggagtatgggtcctcgacctggaatg
ccagataggcaagggcttggaaatcgtggagcagttcgaggaaactctgatagaggaact
ggtgagaagtctgatgatcaggaagttggccttgacaagttgcagatgatgtttggggat
cgacctggtttgagaccagatatggcaggtatgcaaagattccgacttcccggacctgga
atgcaagcaagaccaatgaggccagagtttggagatgtcaatagatttgctggtcctgca
ctacgtatgttgcgtccgatccttgggcagcaaatgatgcaccgaggaatccccccgggt
atgcagatccgtgtaggtccacctatgcagaatgtaagaatggctggtccatctggagga
gtccagtaccctccaaacagtggaatgcgtatgccacctccggggatggggaatccccga
ggaccccttccaggtatgatgcgcccacaaggtatgcctcccccaaatcaaggtttgcct
cctaccaatcaaggaatgccacaaccaaatcaaggaatgccaccatcaaacaaaggaatg
ccaccatcgaatcaaggaatgcctcctgacatgaatgacccacccaagaggccgggacaa
aatgtaccacctctattacctgacaagcctgaaggacaaaatagaagagaagaagatcta
agaagacagagtggggcacctagtagatggagtaatgctacaccagatgaaggcaataaa
ttcccaagccgctggcaagacggaaaccaaccagaatggagaaacaggaacagaggcaat
aatgaccaaggtggaagagaaggctcgtctggtgcagggtttggcagagatgttgacatg
aggatgaacgagggaccacgagatagggaattccgtcgccccgatgaaggggatcaccaa
ggaagggactggagaagagatcgtggggatcgggatgatagatttacccgcgatagagat
gatcgttattcacggcatgatcgtgattctgacaaagaaaaagagagggaccgtggttgg
caagatcgtgagagagaccgcaatcgtgatcgcgacagagggcgggatagagatagagac
cgcgaaagcaatagggattggcgtgaccgaggcgatagagaaagagattatcgcagagac
aggaacagggagagggatagtggacgagaagcccctcctggagactcagcagaatggaaa
ccccctggtaaagagccacctcctcaaagcaccgaagcagatcaaagcaccagcgctgaa
ggagcagtcccagatgcctctgcctctgctccaggacttcctcaggaggctatcatgaaa
ccatctgatactccacaggccatgcttcccgcccagccatttgaggctgcagagccgaga
caaccatccttcgaagaagaagacagctacgaacctgacaaaccaaccgaagataccgag
ccagcttatccggaaatgtcctctgcagccattcctccatcggttccatcaccagaagaa
ccaatggaagacttaggaggagctcctggtgatgttcctggtgttgctgacatgcctcag
gagcctgttgatgacagtactaagcctgaaccagctagaccatacccagaatctccagtt
catgaacaagcccctccaccagaccttggcatgccagcttcaccagacatgccagcatca
ccagacatgccccaggctgcggccgaacctgcccctactgaaactgcccaagtggaaagc
gagcaaagcaaacctgaagctggacaatcggaagcggaagagaacccagaagaatcttga
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