KEGG   Strongylocentrotus purpuratus (purple sea urchin): 578850
Entry
578850            CDS       T01019                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    578850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spu03041]
    578850
Spliceosome [BR:spu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    578850
 Complex C
   U5 SnRNP specific factors
    578850
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_SCAP Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N eIF2A WD40_like Beta-prop_DCAF12 Beta-prop_NOL10_N MIOS_WD40
Other DBs
NCBI-GeneID: 578850
NCBI-ProteinID: XP_784087
UniProt: A0A7M7RBC2
LinkDB
Position
Unknown
AA seq 349 aa
MPVMDQKRKAEEGALVAVKRPKHHELVAVSNQQKALMQSGPPRLSSMTAAIMLLTGHEGE
IFSARFHPNGQSLASASFDRSILLWNVYGECENYGVLKGHQGAVMELHYNTDGSQIVSCA
TDKMVCLWDTETGARVKRMRGHTSFVNSCYYARRGPSLVTSGSDDGTIKIWDTRKRGCAQ
TFQSTYQVLAVSFNDTSDQIISGGIDNDMKVWDLRKNGLLYKMSGHSDSVTGIELSPDGS
YIVSNSMDNTLRIWDVRPFASPERCVKIFQGHQHNFEKNLLRCSWSPDGSKVAAGSADRH
VYVWDTTSRRILYKLPGHVGSVNQVDFHPHEPIILSCSSDKQIYLGEIL
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgcctgtgatggaccaaaaacgaaaagcagaagaaggtgccttagttgcagtaaaaaga
ccaaagcatcatgaactggtggctgtaagcaatcaacaaaaggccttgatgcaatcgggc
ccacctcgtctctcgagcatgactgcagctatcatgttattgactggccacgagggggag
atcttcagtgccagattccatcccaacggacagtccttggcatcagcttcctttgacaga
tccatcctgttatggaatgtgtatggagagtgtgagaactatggagtactgaagggccac
caaggggctgtcatggagctgcactacaacactgatggcagtcaaattgtgtcttgtgcc
acggataagatggtatgtctgtgggacacagagacgggggcaagggtcaagagaatgaga
ggtcacacgtcgtttgtcaactcgtgctactacgccaggagagggccttcattggtcacc
agtggcagtgatgacggtaccatcaaaatttgggatacaagaaaacgaggctgtgcacag
acgttccaaagcacctaccaggtcttagcagtttccttcaacgataccagtgaccagatc
atctctggtggtatcgacaacgatatgaaggtatgggatctgaggaagaacggattgctg
tacaagatgtctggtcacagcgactcggtgaccggtatagaactaagtccagacggatcc
tacattgtgtcaaactctatggataatactttgcgaatttgggatgtacgaccttttgct
tcaccagaacgatgtgttaaaattttccaaggacaccagcacaactttgaaaagaatcta
ttgaggtgctcatggtcacccgatggtagcaaggtcgctgcggggtcagccgatcggcat
gtctatgtctgggatacgacctctagaaggatcctctacaagctacccggccatgtcggc
tccgtcaatcaggtcgacttccatcctcatgaaccaatcatcctctcctgttcaagtgac
aagcaaatctacttgggagagatcttgtga

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