Strongylocentrotus purpuratus (purple sea urchin): 579162
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Entry
579162 CDS
T01019
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
579162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
579162
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
579162
mRNA degradation factors
5'-3' decay
Decapping complex
579162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
INTS5_N
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
579162
NCBI-ProteinID:
XP_030831074
UniProt:
A0A7M7N647
LinkDB
All DBs
Position
Unknown
AA seq
1395 aa
AA seq
DB search
MEPGPTSGSQLNRLLSGGDASQILKEMLNVGNSRSPSNSNNGVGASPQTESSSQASRSDP
AVMNATPSQSAKVQSLLPDATAMEDMISLDKKVAQSIVLEGDDRGGSVPMYGREVDITPS
RASCVESSIPGSSKVKITPVVNYEWEAKYYFGNLVAVNDTFLVYVLRIQSGYGLRILNRR
STVRALLKGFSCVIIDIAFAFHNADILGCVDQRGNLSVWHIKEEGGVISYEPKIQVKRSL
PPSDYHRIVWCPYLPDDDLSNEWSNLLAVSHGERAELWDITAVAGELGTSEIKYEQVSNG
LIAINGHTKAITDMAVSPDGSVLASASLDGTVRFWQMYWEVSEEPPRCLHQFAPHDGEPV
MSLLFCDNHKQQDASLPFWRFLITGADQNRELKVWCTVQWICLQKIRFGSSPNDIQPCLK
VKLDLSASFLMATDIRRKVLYVIQLYQQHDDGTAHFSSVTEFLLMQPMLSFAIVDAGRCR
TKQTQEEAEDGEELQTGEFEEVAAEGEDGDNMNNGQAVSVLVKMFCVFSRALQELQIRFQ
PSPSVKQEIMAGSINTTTSHGDNTLLDGLSDVSFSATDRSVASTDTEPPRIDPASLFSPH
RDPQTPSAETSSFTSESTHSSGQPYLMTPESLMNSSRSPTKTTTPQNLLQDSTASSSSSF
THITGTNVSVDDLLSSCGTSEMNALAATPDSSVTLTPTPSSAPSNQVSPLVGKPSPVGGS
HLPKTYDQIKEDDDEGPKSPPPSPVGGDIQDLQGDQLLESSENVAELLQKSARIKEKRIS
DSSAEVAQILGANIEGEEAEEEEEELEDDVIEQEVNDGDDDDGHDSPVTMDTGKADVDAD
QDENRSFVAQETNTQDQKKTEGLVQSARTDLMDDGDDDSQAVSAGSEMREEERGSVQSPG
GPVVLPLEDQVSRNETSSPDGMYRTSVPVNQQDLGQIMGSLEQMMSLLQTQQQEIKHLRQ
EMNKAQLSNSIIQSTKARIDKLEKGLGTKLDTMFTKQSEQERQRLTLALQEKTNLDKQKQ
ERLLETVSQTLKQQVTSRLDKTVRLEIESKVIPELHKVLVPVTEQLNTSIAQKLTATDQL
MKENIHKLVKSKGVAETMGQAAAHALSDTIQSTYRDAFHSTVVPAFERACSSMFQQINTI
FDAGTREYVNQLEANLAKMKQKQREGQEPVLKELKAVVETQRTSAEDLKSSIFTNVQGEI
SEQLHTTTEKLKKEMLERVQIIVQEEIGTALKDQQTSLQQDVMAAIRSQAATPVPQAQDI
QHIQAKIRQLIEQKHINAAFQHALNAADLRVVVFTCHEVTPDTIFSDDGCLLEQPVLLSL
LQQLSQDLGSQTKIKCIYIDEALLAVDTTFPVTREHLSGVITELRRQVTMVLQTQPNHPQ
TKQLKRVLMQAQSLK
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggagccaggcccaactagtgggagccaactaaatcggctactcagcggtggagatgct
tcacaaatcttaaaagagatgctaaatgtgggaaactcgagaagtccgtcaaacagcaat
aatggagttggagcgtcaccacagacagaatcgtcatcccaagctagcagaagtgaccca
gctgtcatgaatgcgacaccaagccaatctgccaaggtacagagcctactaccagatgcc
acagcaatggaggacatgatctccctggataagaaagtcgcacaaagcattgtcctagaa
ggtgatgaccgtggagggtcagttcctatgtatggccgtgaagtggacataacacctagc
agggcttcatgtgttgaaagctccatcccaggaagcagtaaggtgaagatcacccctgta
gtcaactatgaatgggaggcgaaatactactttggaaacctcgtagcggtcaacgacaca
ttccttgtgtatgtgcttaggattcagtcaggttatggcctgaggattctaaaccgacgc
agcactgtgagggcgctgttgaaaggattttcttgtgtcatcatcgacattgccttcgcg
tttcacaatgcagatatcctgggctgtgtggaccagcgtggcaacctctccgtctggcac
atcaaggaagaaggcggcgtgatcagctatgaacccaagatccaagtgaagaggagcctg
cctccgagtgactaccatcgtatcgtctggtgcccgtaccttcccgatgatgacctttca
aatgagtggagcaaccttcttgcagtctcacatggcgaaagggctgaactctgggatatt
acagcggttgctggagagttaggcaccagtgaaatcaagtatgaacaggtttccaatggc
ctcatcgcaatcaatggtcatacaaaggcaatcaccgacatggcggtgtcgcccgacggg
tcagtcctggccagcgccagtctggacggtaccgtcaggttctggcagatgtactgggag
gtgtctgaggaacccccaagatgtcttcatcagttcgctccccacgacggtgaaccggtc
atgtctctcctattctgtgacaatcacaagcaacaagatgcgagcttgccgttctggcga
ttcctgatcactggggcagaccagaacagagagttgaaggtgtggtgcaccgtccagtgg
atctgcctccagaagatccgctttgggtcctcgcctaacgacattcaaccctgtctcaag
gtcaagctggacctcagcgccagcttcctcatggctacggacatcaggagaaaggttttg
tacgtgatccagctgtaccaacaacacgatgacggcacagctcacttcagctcggtgaca
gagtttctcctgatgcaaccgatgctcagcttcgccatcgtcgatgccggacgatgtcga
accaagcagacccaagaagaggccgaagatggcgaggagctccaaacaggcgaatttgaa
gaagtagctgcagaaggagaggacggtgacaatatgaacaacggtcaagcagttagtgtg
ctggtcaagatgttttgtgtcttctcaagggcgcttcaagaactgcagatccgtttccag
ccgtccccatcagtgaagcaagaaatcatggctggctctataaacacaacgacatcacat
ggagataatacattactggatggactctccgatgtgagcttcagtgccacggatcgctct
gtggcatccacagacaccgaaccgcctcgcattgacccagcatcgctattctcaccccat
cgcgacccccagaccccctcggcagagacgagttccttcacctccgagtccacgcactcg
tccggccagccctacctcatgaccccggagtccctcatgaacagctcccgctcgcccacc
aagaccaccacgcctcagaacctgctccaggacagcaccgccagctccagtagcagtttc
acccacatcacagggaccaatgtctccgtggatgatctcctgagctcatgcgggacttca
gagatgaacgctctggctgccaccccggacagctctgtgactctcaccccgacgccctcg
tctgctccgtcaaatcaggtttctcccctggtgggaaaaccatcgccggtcgggggaagt
cacctgccaaagacatacgatcagatcaaggaggacgatgatgagggcccaaagtcgcca
cccccgtctcccgtgggaggcgacatccaggatctccagggcgaccagttgctggagtcg
tcggaaaacgtcgctgagctcttgcagaagagtgcgaggatcaaggagaaacgtatttcg
gactcgagcgcggaagtggcgcagatcctcggcgcgaacattgaaggggaagaggcggag
gaggaggaggaggaattagaggatgatgtgattgaacaggaggttaatgatggagatgat
gatgatgggcatgattcacctgttaccatggatacagggaaagcggatgttgatgctgac
caggatgagaacaggagctttgttgcacaagaaaccaatacgcaagaccaaaagaaaact
gagggacttgtacaatctgcaagaactgatcttatggatgatggtgatgatgattcgcaa
gctgtatcagctggcagtgagatgagagaggaggagaggggtagcgtccagtcacctgga
ggccctgtcgtcctaccgctggaggaccaggtttcaagaaatgaaacatccagccctgat
ggaatgtaccgtacatcagtaccagtaaaccagcaagatcttggacagatcatgggcagc
ttggagcagatgatgtcactgctacagactcagcaacaggagatcaagcacctgagacag
gagatgaacaaagctcagctgagtaacagcatcatacagtccaccaaggctaggatagac
aagctagagaaggggttgggcaccaagctggataccatgttcactaagcaatcagaacaa
gaacgccaaagactgaccctcgcattgcaggagaagaccaacctggacaaacagaagcag
gagcgtctcctggagacggtcagccagaccctcaagcaacaggtcaccagcagactggac
aagactgtccgcttggagattgagagcaaggtcataccagagctacataaagtgcttgtt
ccggtcaccgagcagctgaacaccagcatagcccagaaactgaccgctactgaccagctc
atgaaggagaatattcacaagctggtcaagtcaaagggtgtggcagaaacgatgggacaa
gctgcagcccatgctctttcagacaccattcagagcacatatcgagatgctttccacagt
actgtcgtgcctgcctttgagagggcttgctcatccatgtttcaacaaatcaataccatc
tttgatgcaggcacaagagaatatgtgaaccagcttgaggcgaacctggccaagatgaag
cagaagcagagggagggacaggagccggttctgaaggagctcaaagccgtggtggaaaca
caaaggacgagcgccgaagacctcaaatcctccatcttcacgaatgtacagggagagatc
tcggagcagctccacacaaccacagaaaagttaaagaaagaaatgttggagagggtgcag
atcatcgtccaggaggagatcgggacggcgctcaaggaccagcagaccagtctccagcag
gacgtgatggccgccatccggtcccaggcggccacgcccgtaccccaggctcaggacata
cagcacatacaggccaagatcaggcaactcattgaacagaaacacatcaatgctgccttc
caacatgctctgaatgcagctgacctgcgagtcgtggtcttcacctgccacgaggtgacc
ccagacaccatcttcagcgatgatggatgtctcctggagcagcccgtacttctttccctc
cttcaacagctttctcaggacttgggctcacaaaccaagatcaagtgcatatacattgat
gaggctttgttggccgtggataccaccttccccgtcactagggagcacctctccggagtc
atcacggaactccgtcggcaggtcaccatggtattacagacgcaacccaaccatccccag
acaaaacagctcaagagggtcctcatgcaggcccagtccctcaaatag
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