Strongylocentrotus purpuratus (purple sea urchin): 579347
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Entry
579347 CDS
T01019
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
579347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
579347
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
579347
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
579347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
GlnR_1st
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
579347
NCBI-ProteinID:
XP_030841644
UniProt:
A0A7M7NZL7
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MAAHSDHVKHHNRICVPGEHLGLESEYHTGPGTYRRNGSIYASLAGHLCSRTEVETELPA
LTVLQQEIQITVPRQKSLVTCKVVSITSKFCRCDILSVESVPLTETFRGMIRKEDIRATE
KDKVEVYKSFRPGDIVLARVLSLGDAQSYLLTTAENELGVVLAKSEAGVPMVPTSWCEMT
CPKTHDKQLRKVAKVQPHYIAYAS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccacagtgaccatgtgaagcatcacaatcgtatctgcgtacctggcgaacat
cttggccttgaaagtgaataccatactggtcctggtacttacagaagaaatggcagcatc
tatgccagtcttgcaggacatttgtgctccagaacagaggtcgagactgagttaccagca
ctgacagtactccagcaggaaattcaaataactgtaccaagacagaaatcgttagttaca
tgcaaggtggtgagcatcacgtcaaagttctgccgttgtgacatcctgagcgtagagagc
gtcccattgacggagacattccgagggatgattcgcaaggaagatatccgagctacagag
aaggacaaggtggaggtgtacaagtccttcaggcctggcgatattgttcttgcaagagtt
ctatcattgggtgatgcccagtcctatcttttgacgacagcagagaatgagcttggtgtt
gtacttgccaagagtgaagcaggtgtccctatggttcctacaagttggtgtgagatgacc
tgccccaagacacacgacaaacaactccggaaggtcgcaaaagtacaaccacattatatt
gcgtatgcaagctag
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