Strongylocentrotus purpuratus (purple sea urchin): 579451
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Entry
579451 CDS
T01019
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03082
ATP-dependent chromatin remodeling
spu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
579451
03083 Polycomb repressive complex
579451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spu03036
]
579451
Chromosome and associated proteins [BR:
spu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
579451
Histone modification proteins
HAT complexes
HATB complex
579451
HDAC complexes
Sin3A-HDAC complex
579451
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
579451
PRC2.2
579451
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
579451
Heterochromatin formation proteins
Other heterochromatin formation proteins
579451
Chromatin remodeling factors
NuRD complex
579451
NuRF complex
579451
NuRF complex (fruit fly)
579451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
eIF2A
WD40_MABP1-WDR62_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
579451
NCBI-ProteinID:
XP_030851280
UniProt:
A0A7M7PJJ0
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MAEKDNETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTSQWLPDVTKPEGK
DYSIHRLVLGTHTSCFPDPFLSRSDEQNHLVIASVQLPNDDASFDAAHYDSEKGEFGGFG
SVSGKIEIEIKINHEGEVNRARYMPQNQTIIATKTPSSDVLVFDYTKHPSKPDLNGQCRP
DLRLRGHSKEGYGLSWNPNLHGHLLSASDDHTICLWDINDKPKENRVVDAKTIFTGHSAV
VEDVSWHLLHESLFGSVADDQKLMIWDTRVSNLAKASHSVDAHTAEVNCLSFNPYSEFIL
ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK
IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY
NDEDPDTSAADLECQQQTVS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaggacaatgaaacgtttgacgatgcggtggaggagagggtgatcaacgag
gagtataaaatctggaagaagaacacgccgttcctttatgacctcgtcatgacccatgcc
ctggaatggccaagtttgacctctcagtggctcccagatgtcacaaaacctgaaggtaaa
gactattccatccatcgcctggtgcttggtacacacacttcttgttttcctgaccctttc
ctgagcagatctgatgagcagaaccacctagtcatagccagcgtccagcttccaaacgac
gatgctagctttgatgcagcacactacgacagcgagaagggagagtttggagggtttggc
tcggtgagcggtaagatcgagatcgagatcaaaatcaaccacgaaggagaagtgaacaga
gcacgctacatgccacagaatcagaccatcatagcaaccaagacccccagcagtgatgtc
ctggtcttcgattacacaaagcacccttccaaaccagatctgaacggtcaatgtagaccg
gacctaagacttcgcggtcactcgaaggagggttatggactctcctggaaccctaatctt
catggccatctactcagtgcctcagatgatcacaccatctgcctgtgggacatcaatgat
aagcccaaagagaaccgtgtggtggatgccaagacgatcttcacgggtcattccgcagtg
gtggaggacgtctcgtggcatctcctccatgagagtctctttggatcagtggctgatgac
cagaaactcatgatctgggatacgagagtaagcaaccttgccaaagcgagtcattctgtg
gacgctcacactgcagaggtgaattgcttgtctttcaatccatacagcgagttcatcctt
gctactggatcagctgataaaactgttgcattgtgggatctgcgtaatctgaagctcaag
ctgcactcgtttgagtcgcacaaggacgagatcttccaagtacagtggtctccgcataac
gagaccatccttgcttccagtggaaccgacagaagactcaatgtatgggacttaagtaaa
attggtgaggagcagtcgccggaggatgctgaagatggacctccagagctgctcttcatc
catggcggacacacagccaagatctcagacttctcctggaatcccaacgaaccttgggtc
atctgctctgtctcagaagacaacatcatgcaagtctggcagatggctgagaacatctac
aatgacgaagatcccgacacatcagcggctgatttagaatgccaacaacagactgtatca
taa
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