Strongylocentrotus purpuratus (purple sea urchin): 580164
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Entry
580164 CDS
T01019
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
580164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
580164
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
580164
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANTH
Motif
Other DBs
NCBI-GeneID:
580164
NCBI-ProteinID:
XP_030836621
UniProt:
A0A7M7NHC5
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MGSTSSYKSFKEKEREIANSYSSIPVAPNNKSSYSSISTVGGRGVHKDNKENIGGSITVL
GAPSSAPGFSGTSVTSPGVNNISTISSISSINSTPSPAVQPMQSTYGQPGNAPPMPQPPP
SATLPPPNMPDFSKPPPGMPPPGMGPPGMGPRGPPPGPPPPHMTGPPPNMGGPPSNLPPP
NFSGPPRPMFGDGNYPPQSGGPPMSGPPMSGPPPPMGMHGGPPPPNMGPPPMGMGRGPRP
PMGGPPPMMGMQGPPPRMGGPPPPGPHGPPPMGPPPGGNWNRPPPPFGRPDGPPPPFYDQ
PLPMGPGMGPGPGPGPGPGPGGPPIGSGPPPPLSGSAGMAPKSGESKAYSQFKSNWATSN
RGSDSESDISSGSEDRKESDYDRDIREFSKFLNSKAEADKVREFSRERRDRPSRDRSPDR
SRDRSRDKTRERDRDRDRDRDRDRDRDRDREGRDRDRETRDRDRERDRGDREHSSRSRDL
SRDLERDRDRDKDKEREKRLKEKEEDKDDRVRDRYKDSRHKSSRRKRDDEDDKYSSSRHR
HRHSRRDRDKEGGEEYEVLDAASGDDDLNPSLVGNAYHSD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcacctccagctacaagtcattcaaggagaaggaacgagagattgctaattcc
tactcgtccatcccggtcgcccctaacaacaagtcctcctactcctccatctcaaccgtt
ggtggtaggggtgtccacaaggataacaaggagaacatcgggggttccatcactgtcttg
ggagcgcccagcagtgcaccaggcttcagtggtaccagcgtcactagtccaggagtgaac
aacatcagcaccatcagctccatcagtagcatcaacagcacccctagtccagcagttcaa
ccgatgcagtcaacctacggccagcctggcaacgcccctccaatgccacaacctcctccg
tcagctaccctacctccacctaacatgccagacttctccaagcctccgccagggatgccc
ccgcccgggatgggtcctccggggatggggccaaggggccctcctccaggaccacctccg
ccccatatgacagggccccctcctaacatgggaggacccccatcgaatctaccccctcca
aacttctcagggccaccacgaccgatgtttggagatggtaattatccaccacagtctgga
ggccctcctatgtcgggcccccctatgtcgggcccaccacccccaatgggcatgcacggt
ggtcccccgccccccaacatgggcccacctcctatgggcatggggagggggccccgccct
ccaatgggtggtcccccacccatgatggggatgcaaggacccccacctagaatgggaggc
cctcctccaccaggcccacatggacccccaccgatgggaccccctcctggaggcaactgg
aacagaccgccccctccctttggaagaccagatggacctccaccacccttctacgaccag
ccccttcccatgggcccaggaatgggaccaggaccaggaccgggtccaggtccaggtcct
ggtggcccacctattgggtctggaccccctcctcctctgtctggatccgcaggtatggca
cccaagtctggggagtccaaggcttactctcagttcaagtctaactgggctactagtaac
cgaggcagtgattcagaaagtgatatcagcagtggcagtgaagatcgtaaagagtccgac
tatgacagagacatcagggaattcagtaaattcctcaacagtaaagcggaggcagacaag
gtgagagaattcagcagggaaagacgagataggccaagcagagacagaagcccggaccga
agccgggacaggagtagagacaaaaccagagaacgagatcgggacagggaccgcgatcgg
gatagggaccgggatcgtgacagggatagggagggcagggacagagaccgggaaacaaga
gacagagatcgagagcgcgatcggggcgatcgcgagcattccagccggagtcgagacctg
agtcgcgatctcgagcgggatcgtgatcgggataaggacaaggagagagagaaacgactc
aaggagaaagaggaagataaagatgacagagttagagatcgttacaaggattccaggcac
aaatcgtcaagaaggaaacgagatgacgaagacgacaagtacagctcatcacgtcacagg
cacagacactcccgtcgggatagggataaagaagggggtgaagagtacgaggtgctagat
gctgccagcggagatgatgatctcaatccatctctagtgggtaatgcataccattcagac
tag
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