Strongylocentrotus purpuratus (purple sea urchin): 580304
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Entry
580304 CDS
T01019
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04120
Ubiquitin mediated proteolysis
spu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
580304
04120 Ubiquitin mediated proteolysis
580304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spu04121
]
580304
Enzymes [BR:
spu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
580304
Ubiquitin system [BR:
spu04121
]
Ubiquitin ligases (E3)
U-box type E3
580304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
580304
NCBI-ProteinID:
XP_030843160
UniProt:
A0A7M7NXV3
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MSELTPDEIRRRRLARLDRSPAGPVARTTPSQEFGAEQSMTPTSPTQLAASPIRPPLAID
VADSSGTCSDLGRGSSVEGAQSNASSQSPVSEEPMPSLDSSGVGSLDADPPQSMDMDCQS
ACDVGSLSQMDVDSGIETTEVEEVPSAKKKSSPRLLLCGVSEHTLLVVMSKVFHISWREQ
GSGVLYLKELAAEFAEDPSKVFGSMEDLVCLVLMEVLTLHSSSGNPYSNLPESQGASTSS
GPSAPSATAVVQREAEMLNYLVQCVQRASGEERSASEVYRQYPAMRELLQATRHQAVCHA
ALLLQGVFTQPRSSTDHSPLLPMLSEFSLPGSFLQELVLQSYPDPQGFKTIFLPVIMGLI
QRLQRSSLSTDEYRTPLMILSELCRIKDGNARPICSLLASSPLWLPDPVSSAAGRELEQL
SLLGACLRLSVFSEDDQKVADKYFATTTDSTRLATDTLQRVLEQVRVEQHHIVHSMLVNS
ETRESMLSFLSNVLSRNNKRAQMQVDESQVAGDGFMLNLLAIFHRLSQKIQLNKVDVRYT
HHPKARIDVSQETKMNMTEQEAQEWLKGIKPETWVEPKFPTECYFMTLHCQHLALLPACR
HYSQRIRTLRELSRLTDDLQNQEPQWKGTPLERRNRQLLERWKSQTKKIEKAKVCADAGL
LHENLLRGCFQFYGTVMSLLVGLVSPKGPALPLHTDIPPAFAALPEYYIEDIAEFLLFVV
QHMPQILEDTAQHDMVPFLLTFMCSGQYLKNPYLVAKLVEVFFVLSPAVQPKTAKLFEAI
QLHSLAIPHLVPALMRFYTDIETTGASSEFYDKFSIRYHISIIFKALWKIPLHQGVFVKT
SEIQDSNFVRFINMLMNDTTFLLDESIGCLKRIHEVQEAMKDQQKWREISQEEQQSRSRQ
LSSDQRQCRSYLTLANETLEMFNYLTIHIKKPFLRPELCSRLAVMLNSNLQQLCGPRCND
LRVENREKYGFEPRKMLDQLTTIYLNLDSKELIEGIAADERSFCQDIFAEAIRIMNRNKI
KTSSQIQQFSDLSLRAHKIAEMNRQTDLDLEDAPDEFRDPLMATLMDDPVILPSGNVMDR
SVIERHLLNSQTDPFNRSALNSEMLQPATELKQRIQEWIHNKMKKE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactcacaccagatgagattcgacggaggcgtctagctcgactagatagaagt
cctgcaggtccagtggctaggacgacaccaagccaggaattcggggcggagcagtcaatg
acacctacctctcctactcagcttgcagctagcccaataagacctccacttgctattgat
gttgcagattcttcaggtacctgcagtgatctaggaagaggaagctccgtagagggcgct
cagagcaatgcaagcagccaatcacctgtctcagaggagcctatgcccagcttggatagc
agcggggttgggagtctggacgctgacccaccacagagcatggatatggactgccaatca
gcatgtgatgtagggtctttgtctcagatggatgtggattctggtattgagactacggaa
gtggaagaagttccctctgccaagaagaagtcttcccctcgattgctcttatgcggagtg
agtgaacacaccctgttggtggtcatgtctaaagtgtttcatatatcatggagagagcaa
ggttcaggtgttctgtatcttaaagagttggcagcagagtttgctgaagatccatcaaaa
gtatttgggagtatggaagacctagtgtgtttggtgttgatggaggttctcactttacat
tcatcaagtggcaatccatactctaatctaccagaatctcagggagccagtacatcaagc
ggaccttccgcaccatcggcaacagccgttgttcaacgcgaggcagagatgctgaattac
ctcgttcagtgtgtacagagagcttctggagaggaacgatcagcttcggaagtttaccga
cagtatccagcaatgagagagcttttacaggcgaccagacatcaagctgtatgccacgct
gctcttttactacagggagtcttcactcagcctaggtcttctactgatcactcaccattg
ttacccatgttaagtgagttcagtctgccaggaagcttccttcaagagcttgtattgcag
agttatcctgatccacaaggattcaagactatcttccttcctgtcatcatggggctaata
cagagacttcaacgaagctccttatcaacggatgaatacagaacacccctcatgatttta
agtgaactatgcagaataaaagatggcaatgcaagacctatatgtagccttcttgcctca
tcccctctgtggttacctgatcctgtaagcagtgcagctggtagagagcttgaacaacta
tctcttctaggagcctgcttgagactttctgtgttttctgaagatgatcaaaaagtagca
gacaaatactttgctacaacaacagacagcaccaggctagcaactgatacactccaaaga
gtactagagcaagtcagggtggaacagcatcacattgtgcatagtatgctggtgaacagt
gaaaccagagaatcaatgctatccttcctaagcaatgtattatccagaaacaacaagaga
gctcaaatgcaggttgatgagagccaggtcgctggggatggtttcatgctcaacctccta
gccatcttccatcgtctcagtcagaagatacagctcaacaaggtggatgtacgatacacg
catcaccctaaggctaggatagacgtctctcaggaaactaagatgaatatgacggaacag
gaggctcaggaatggcttaaaggaattaagccagagacctgggtggagcccaagttccca
acagagtgttacttcatgaccctccactgccagcaccttgccctgctgccggcctgcagg
cactactcccagcggatcaggaccttgagggagctctccaggctaacagatgatcttcag
aaccaggagccacagtggaaggggactcccctggagcgcaggaacagacagctcctggag
cgatggaagtcacagacaaagaaaattgagaaggctaaagtgtgtgctgacgctggtctc
ctccatgagaacctactcagaggctgcttccagttttatggcactgtcatgtctcttcta
gtcggactcgtcagtcctaagggaccagccctgccattacatacagacattccaccagct
tttgctgccctgccagaatactacattgaagacatcgctgagtttcttctatttgtcgtt
caacacatgcctcagatcttagaggacactgcccaacatgacatggtaccgttccttctc
actttcatgtgctcaggccaatatctcaagaatccttacctcgttgcaaagcttgtcgag
gtattctttgtgctgagtccagccgtccagcccaaaactgccaaactctttgaggctatt
caactccactcactcgccattccgcatcttgttcctgcactcatgagattctacacagat
atagagacaacgggagcaagcagtgagttctacgataagttcagtatccgctaccatatc
agtatcatcttcaaagcactttggaagattcctctacaccaaggtgtctttgttaaaacc
agcgagatccaggattccaactttgtgcgcttcatcaacatgctgatgaatgacaccacg
ttccttctagatgagagcattggttgcctgaaacgcatccatgaggtccaagaagctatg
aaggatcaacagaaatggagagaaatttctcaggaggagcaacagagcagatctcgtcag
ctctcttcagaccagcgtcaatgtcggtcctacctcacgcttgccaacgagaccctagag
atgttcaactacctcactatacatatcaagaaacccttcctaagaccagagctatgcagt
cgtctggcggtcatgctgaactctaacctccagcagctctgtggcccaaggtgcaatgat
cttcgtgtcgagaaccgtgagaagtacgggtttgaaccacgtaagatgcttgaccaactg
accactatctatctcaacctggacagcaaagaactcatcgagggtatcgcagccgatgag
cgttctttctgccaggacatctttgctgaagccatccgcatcatgaaccgcaacaagatc
aagacctcgtctcagatccagcagttttctgatctatctctgagggctcataagatagct
gagatgaatcgacagactgatctagacctagaggatgcccctgacgaattcagagatcca
ctaatggcaacattgatggatgacccagtgatcctcccatcaggcaacgtcatggaccgt
tcagttatagagcgccatctgttgaactcccagacagatccattcaaccgtagcgccctt
aatagtgagatgctccaaccagccactgaactgaaacagaggatacaagaatggatccat
aacaagatgaagaaagagtga
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