Strongylocentrotus purpuratus (purple sea urchin): 580431
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Entry
580431 CDS
T01019
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
580431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
580431
03041 Spliceosome [BR:
spu03041
]
580431
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
580431
Spliceosome [BR:
spu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
580431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_EIPR1
Beta-prop_NOL10_N
Beta-prop_SCAP
PQQ_3
Beta-prop_DCAF12
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
580431
NCBI-ProteinID:
XP_011678541
UniProt:
A0A7M7HLI4
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MAMSYEEQILKEKKQLHMSVFAQCISPDGKYLLAGNNYGTIAVFSMRNALASDANENSRK
PIFTFKAFDGAIFALLSTENFLICGGSGDIKAWKWKDIQQKAPRVAWSLSVPHSANFGAV
ETNGLAYSRQDNTLYSGGGDSELHVWDLESGTCKHSYTDHTDYIHAVALFNTSAQVASGS
EDGTVRIWDTRTSGEPVAILEPSKHEECINNPRDKWISCVAVDPADDWLICGGGPSLSLW
HLRSLSPTTVFEAPKCQPHVVLYHDDAVISAGTSPNIYHWHVNGDSKLTTPCTAMDVYSV
VINTESEANKVLCSSGASSKIDVYTNFGYKAFSLDFC
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtcgtatgaggaacaaatcttgaaggagaagaagcagcttcacatgtcagtg
tttgcacagtgtatatcaccagatggcaagtacttactagctggtaacaactatggaaca
attgctgtcttcagtatgcgtaatgcactggcttcagatgcaaatgagaacagcagaaaa
cccatcttcacattcaaagcctttgatggtgctatttttgctctgttgtcaacagaaaac
tttttgatttgtggtggaagtggagatatcaaagcttggaagtggaaggacattcaacag
aaggcacctagggtagcctggtcactgtctgtgccccactctgctaactttggagcggtg
gaaacaaacggccttgcttacagccgtcaggacaacactctatactcaggtggaggtgac
agtgaattacatgtgtgggacttagagtccggtacatgtaagcattcttatacagaccac
actgactacatccatgctgtagcattgttcaatacatcagcacaggtcgcatcaggttca
gaagatggaacagtcaggatatgggatacaagaacgtcaggagaacctgtagccatactg
gaaccaagcaaacatgaggaatgcatcaataatccaagagataaatggataagctgtgta
gcagtggatcccgcagatgattggctgatttgtggtggtggaccatcattgagtctgtgg
catctgagatctctttctcctaccactgtctttgaggcacctaaatgtcagccacacgtt
gttctctaccatgatgatgctgtaatctctgcagggacgtctccaaacatctatcattgg
catgtgaacggtgattctaaactaaccacaccatgtacagctatggatgtctacagtgta
gtcatcaatacagagtcagaggctaacaaggttctgtgttcatcaggggcgagttctaag
attgatgtctacacaaactttggttacaaggctttctctttagatttctgctga
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integrated database retrieval system
