KEGG   Strongylocentrotus purpuratus (purple sea urchin): 580695
Entry
580695            CDS       T01019                                 
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    580695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spu03019]
    580695
Messenger RNA biogenesis [BR:spu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     580695
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     580695
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 580695
NCBI-ProteinID: XP_011675340
UniProt: A0A7M7HK45
LinkDB
Position
Unknown
AA seq 246 aa
MAGLELLSDEGFRLDGRRPSELRKIRLRLGVFDQADGSAYIEQGNTKALATVYGPHEVLG
GKGKPLHDKVIINCQYSMATFSTNERKNRPQGDRKSTEMSLHLQRTFEATIQTHLYPRSQ
IDIFVQILQADGGNYCACVNAATLAIINAGIPMKDYVCACSSGYVNNTPLTDVSYLEESQ
GGPVVTVAMLPKSEQIALFKMDNRLHVDHLEQVLEVASKGCKDMYAVMNAAVKEHVSRMA
KSMECS
NT seq 741 nt   +upstreamnt  +downstreamnt
atggcaggactggagcttctttctgatgaaggctttagactagatggccgacgaccatct
gaacttagaaagattcgtttgcgtcttggagttttcgaccaggcagatggatcagcatac
attgaacaaggaaatacaaaggcattggcgaccgtatacggccctcacgaggtccttgga
ggaaaaggtaaacctctacatgataaagtgatcatcaactgtcaatacagcatggcaacc
ttcagcacgaacgagaggaaaaaccgccctcagggagacaggaaatcgaccgaaatgtca
cttcatctccagcggacatttgaagctaccatacaaacacacctctatccaagatctcag
attgatatctttgtacagattctgcaagcagatggaggaaattactgtgcttgtgtcaac
gctgctacactagcaatcatcaatgcaggcatccctatgaaggactacgtgtgcgcttgc
tcctctggctatgtgaacaatacgcctctgaccgatgtgagttaccttgaggaatctcag
ggagggcctgtagtgaccgtagccatgctgccaaagtccgaacagatcgctctctttaag
atggacaaccggctccacgtagatcaccttgagcaggtgttggaggtagccagtaaagga
tgcaaggacatgtatgctgtaatgaatgcagccgtcaaggagcatgtcagtaggatggca
aagagcatggaatgtagctga

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