Strongylocentrotus purpuratus (purple sea urchin): 581218
Help
Entry
581218 CDS
T01019
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog isoform X2
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
581218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spu03400
]
581218
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
581218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
581218
NCBI-ProteinID:
XP_786323
UniProt:
A0A7M7RBR1
LinkDB
All DBs
Position
Unknown
AA seq
1779 aa
AA seq
DB search
MAKRKVSGPVKASKGGKGKTNTEPQDKKKEPAKQDVKARSKVKEGLKSSVQDEELAPAEV
IQNGRRRGRSAKLQAVKKMATMQEDIKGTEGSGDDDDDDDDDDDDNVCLDLEYDDEEDED
DFEATVRIEKKTRHKPLSSEKLKSQGKSKLPKEDLKAQVKQVEMKYEERYVSQASQEQFL
SLSESDSSSEDEDIGSSSKVKGSSSKPIPDKSKSVNAAADKSKVREMKKELSGSSPVVPS
HSALKSMFDDLEDVPDLEGSQPRKDGRCIQSLFDDVDQESDLGDLRTHEEQTDAKPVVAS
QYFANSDAEECRSPDRKNLTLKEKLNVNDAISTVKSTLSDEIKKKEDDESEYEESPPKKA
KKQIRKRPATGKRAAKIEEKKNEKQTKKYNDPNASPATSQYFANSDADECKSPDRKNLTL
KEKLNVNDARSTVKSTLFDEIEKKEDDKSEFEESPPKKAKKQIGKRPTKGKQAAKIKEKK
NEKQTKRDDDPHALPATSQYFANSDGDECRSPDRKNLTLKEKLNINDARSTVRSTLSYEI
KKKGDHESEFEESPPMKAKKQIRKRPTTGKQAAKIEEKKNEEQTKKDYDPKRPTTGKQAA
KIEDKKNEKQTKREDDSNTFPATSMKRGRTKSQSTTSNTPVVKPERRRGGGIVDQPDVGD
GVKSLEKKRKLSTVVKNSSASTVKKVGRGDQVDVKDSINSPVKKGKLSTGVKNPSASTVK
KAGRVDQAYVKDSINSPVKKGKLSTGVKNSSASTVKKAGRGDQTDVKESINSPAEKRKLS
NRMKSSSDDAVKKAGRGTTKGKKETKKKVKKMEIKVEEEDADMSSDDSHSDWEEVEDTPM
NELGEPMLEPSPEKEAKAETMSLEIDIDLPGTSRAGKKKKKEYNWANYFQWQVNKYNKER
QLELHKAHLVLLLASSFHSNKICNKMELQCVALSTVPVEILSKKPKQLNINYLSKVLSWF
KNCFKIRSDLKEDLMTSLDWILPSMFAKRQAASERQLVHMFAIILRCLGVDVRLIFSLQP
LTFKAKKLTKKFKKANEKAPIKKPPSQSLMKEREKVPSKQSSSSGDISSPSKPHQSPSKS
SSNKSSASALKKHSTNASMKTNLPKSRQQPTKPSSSKLSASAPKTQSTSSNMKMSSSKAA
HPPSKSLSNSSSSSATAKTTSSDTKMSPLKSGQRRNSKASSGKSSASAPKTQATSSNPKT
TSSKAVQGKGKAPSGQAIKEQKMAPKKISGSKMRLDMSRSTGKEGGEKQRLPSSGGHTPK
RTLRVKNNTRRTMASKMNPKYDQQDESGDDDHSDYEEELRKSASKRKSRAPSTKGSSKKR
AKMASSVSSIEEVLSDSDFDVQVMSVTKQPRKTEPKKGGIKKKASRKVLSSDSDECVMLV
DILDPGSDCWLEVYLSSEKRWMCVDCVRTLINKPEMCEKKATQPITYVIGVENDGCVKDV
TRRYASKWMTETHKIRPVDEWWEETLKPYQSYKDRDMKEDSDVQSNLTNKPLPTSVGEYK
NHPLYALKRHLLKFEALYPESAAIMGYCKGEPVYSRECVHQLHTKETWMKEGKAIRIGEK
PYKMVKPRPKWKKGQGMIKTEEAILGIYGAWQVEDYIPPPAVDGKVPRNEYGNVELFKPT
MLPAGTVHLKLPGLNRIARKLDIDCAPAMMGWDFHSGYIHPVMDGFVVCDEHVDVLVAAW
EEDKAEHEKKEKEKREARAMNHWKLFIKSLLIKERLKHRYGENNPNFDAPGTSQQSEKDG
RKDSSPVKASWPENKMTAFTGDEGNLLPFEKKSKKKKKR
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtaaggtgtctggtcctgtgaaggcatcgaaaggaggcaaaggaaaaacc
aacacagagcctcaagacaagaagaaggaaccggctaagcaagatgtaaaggccaggtca
aaggtcaaggaaggtctgaagtcttcggtccaggatgaagagttagcacctgctgaagtc
attcaaaatggaaggcgaagaggcaggagcgccaaattacaggctgtaaagaaaatggca
accatgcaggaagatatcaaagggacagaaggcagcggtgatgatgatgatgatgatgat
gatgatgatgatgataatgtttgccttgatttagaatatgatgatgaagaagatgaagat
gactttgaagcaacagtacgaatagagaagaaaacaaggcacaaacctctctctagtgaa
aaacttaaatctcaaggtaaaagcaaactacctaaagaagatttgaaagctcaggtgaaa
caggtggagatgaaatatgaggaacggtatgtatcccaggcttcacaagagcagtttctt
tcattaagtgaaagtgattcttcttcagaagatgaagacattggaagttcgagcaaggtg
aaaggttcttcgtcaaagccaatccctgataaatctaaaagcgtaaatgctgcagctgat
aaatcaaaggtgagggagatgaaaaaggaactgagtggatcctctcctgtagtgccatct
cattcagcactgaagtcgatgtttgatgacttagaagatgtcccagatcttgaaggttct
caaccaaggaaggatggaagatgcattcagtccttgtttgatgatgttgatcaagaaagt
gatcttggagatttaaggacccatgaagaacaaactgatgcaaaaccagtggttgcgtca
cagtattttgcaaacagtgatgcggaggagtgtagaagtcctgatcggaaaaaccttacc
cttaaggagaagctgaatgtaaatgatgcaatatctactgtcaaatctactctctctgat
gaaattaaaaagaaggaagatgatgaaagtgaatatgaggaaagtcctccaaagaaagcc
aagaaacagatcaggaagaggccggccacaggtaaacgagctgccaaaattgaggaaaag
aagaatgagaaacaaaccaagaaatataatgatcctaatgcttcaccagctacttcacag
tattttgcaaacagtgatgcggatgagtgtaaaagccctgatcgtaaaaatcttaccctt
aaggagaagctgaatgtaaatgatgcaagatctactgttaaatctactctctttgatgaa
attgaaaagaaggaagatgataaaagtgaatttgaggaaagtcctccaaagaaagccaag
aaacagatcgggaagagaccaaccaaaggtaaacaagctgcaaagatcaaggaaaagaag
aatgagaaacaaaccaagagagatgatgatcctcatgctttacctgctacttcacagtat
tttgcaaacagtgatggggatgagtgtagaagccctgatcggaaaaaccttacccttaag
gagaaactgaatataaatgatgcaagatctactgtcagatctactctctcgtatgaaatt
aaaaagaagggagatcatgaaagtgaatttgaggaaagtcctccaatgaaagccaagaaa
cagatcaggaagagaccaaccacaggtaaacaagctgccaaaattgaggaaaagaagaac
gaggaacaaaccaagaaagattatgatcctaagagaccaaccacaggtaaacaagctgca
aaaattgaggacaagaagaatgagaaacaaaccaagagagaagatgattctaacactttt
cctgctacttcaatgaaaagaggaagaactaaaagccagtctactacatcaaatacacct
gtagtgaaaccagaaagaagaagaggaggaggaatagtagatcaacctgatgtgggagat
ggtgtcaaaagtctcgaaaagaagaggaaactttccactgtggtgaaaaactcctcggcc
agtactgtcaagaaagttggaagaggagatcaagttgatgtaaaagatagcatcaacagc
ccagtaaagaaagggaaactttccactggggtgaaaaacccctcggccagtactgtcaag
aaagctggaagagtagatcaagcttatgtaaaagatagcatcaacagcccagtaaagaaa
gggaaactttccactggggtgaaaaactcctcagccagtactgtcaagaaagctggaaga
ggagaccaaactgatgtaaaagaaagcatcaacagcccagcggagaaaaggaaactttca
aacaggatgaagagttcctcagatgatgcggtcaagaaagcaggaagaggaacaaccaag
ggaaagaaggagaccaagaagaaggtcaagaagatggagattaaggtggaagaggaagat
gcagatatgtcatctgatgatagccactcagactgggaggaagtagaagacacaccgatg
aatgaattaggagaacccatgctggagccgagtcccgagaaggaagccaaggctgagaca
atgtccctagagattgatattgatctaccaggaacatccagagcaggaaagaaaaagaag
aaagaatataactgggcaaattatttccagtggcaagtcaacaaatataacaaggagaga
caactagagctacacaaggctcatctggttctgcttcttgctagtagtttccatagcaac
aagatttgcaataagatggagcttcagtgcgtggctctctccaccgttccagtcgagatt
ctatcaaagaaaccgaaacaactcaatataaactatcttagcaaagtccttagctggttc
aagaattgttttaagatcagatctgatctgaaggaggatttgatgacatcgcttgattgg
attctaccatccatgtttgcaaagagacaagcagcttcagagaggcaactagttcatatg
tttgcaattattctgaggtgcctaggagtagatgtacgtctcattttctctctccagccg
ttgacctttaaagccaagaagcttaccaagaaattcaagaaagcgaatgagaaagctcca
atcaagaaaccaccgagtcagagtttaatgaaggaacgagagaaagtgccttcaaaacag
tccagttcttctggtgacatctcatctccttcaaaacctcatcaatcacccagcaaatct
tcttcaaacaagtcatcagcgagtgctctaaagaagcattccacaaatgcaagcatgaag
acaaatcttccaaaatccagacagcagcctaccaaaccttcttcaagcaagttatcagca
agtgctcctaagacacaatctacttcatcaaatatgaaaatgtcttcctcaaaagcagct
cacccgcccagcaaatctttatccaacagttcatcatctagtgctactgcaaagacgaca
tcctcagacacaaagatgagtcctttaaagtctggtcagcgacgtaacagcaaagcttca
tcaggcaaatcatcagctagtgcaccaaagacacaggccacttcatcaaacccaaagact
acttcttctaaagctgtgcaaggaaagggtaaagcacccagtgggcaagccataaaggag
cagaagatggcaccaaagaaaatatctgggagcaagatgagattagatatgagcaggagc
actggtaaggaaggaggagagaaacagcgattaccatccagtggaggacatactccgaag
agaacccttagggtaaagaacaacaccagaaggacaatggcttcaaagatgaacccaaag
tatgaccagcaggatgaatcaggcgatgatgatcacagtgactatgaggaggaactgagg
aaatctgcatccaagaggaagtcaagggcaccgtctacaaagggatcctccaagaagaga
gcaaagatggcatcatcagtgtccagcatcgaggaagttttatctgacagtgacttcgat
gttcaagtgatgagtgtcaccaagcaaccaaggaagactgaacctaagaagggtggaatc
aagaagaaagcctcgaggaaggtcttgtcatctgattctgatgaatgtgttatgttggta
gacatcttagatccaggctctgattgctggcttgaggtgtatctatcttctgaaaagcgt
tggatgtgtgtggactgtgtgagaacgctgattaacaaacctgagatgtgtgagaagaaa
gcaacccaacccatcacatatgttatcggtgtggaaaacgatggttgtgtgaaagacgtg
accagaaggtatgcgtccaagtggatgacagagactcacaagataagacctgttgatgaa
tggtgggaagaaaccctgaagccatatcagagctataaggatagagacatgaaagaggac
tcggatgttcagagtaacctaacaaacaagccgctacctacatctgtaggagaatacaag
aaccacccactatatgccttgaagagacatttactgaaatttgaagctttgtatccagag
tctgccgccatcatgggatattgcaaaggagaacctgtgtattccagggagtgtgtacat
caattgcacacaaaagagacatggatgaaagaaggaaaagccatccgcatcggtgagaaa
ccttataagatggtcaagccaagaccaaaatggaaaaaaggacaaggtatgatcaagacg
gaagaggctatcctggggatatatggggcctggcaagttgaagattacatcccgcctcca
gcagtagatggcaaggtgcctcgtaatgagtatggaaacgtggagctgttcaaacctacc
atgctgcctgctggtactgttcatctcaagcttcctggattgaacaggattgctcgtaag
cttgatatagattgcgctccggccatgatgggatgggacttccattcaggctacatccat
cctgtaatggatggatttgttgtctgtgacgagcatgtagatgtcttggtagcagcttgg
gaggaggataaggcagagcatgagaagaaggaaaaagaaaaacgagaagccagagccatg
aaccactggaaactcttcatcaaaagccttcttataaaggaaagacttaaacataggtat
ggggagaataatcccaactttgatgcaccaggtacatctcaacaatcagagaaagatgga
agaaaagattccagtccagtcaaggcttcatggcctgagaacaagatgactgcattcaca
ggagatgaagggaatcttctgccgtttgagaagaaaagtaagaagaagaaaaagcgatga
DBGET
integrated database retrieval system
