Strongylocentrotus purpuratus (purple sea urchin): 581409
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Entry
581409 CDS
T01019
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spu03009
]
581409
03036 Chromosome and associated proteins [BR:
spu03036
]
581409
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
581409
Ribosome biogenesis [BR:
spu03009
]
Eukaryotic type
Pre-60S particles
Helicases
581409
Chromosome and associated proteins [BR:
spu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
581409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
581409
NCBI-ProteinID:
XP_030835277
UniProt:
A0A7M7NED1
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MPTIEMSQQIPEIAMVNGDDVSLNGEIRKKKKSKKEKKIKSDDAEIESPSKEESPSEEKP
KKKRKKGSDEEGEDEIKKKKVKKEKNGEVQQNGIVKEKPSSSKQGEVDEETQEKIGAFSN
FGIRPKTIEKLHAKGVKYLFPIQAQTFKPIDDGFDVIAQARTGTGKTLSFVLPLVEKWQQ
FPQKSGRQPIILALAPTRELAKQISEYFEAIGPHLSTTCIYGGTSYWPQESAIRRGLDVV
VGTPGRILDYIRKNTLDLSKLKHVVLDEVDRMLDMGFAESVEEILGAAYKTGQPGDGEEA
PNNPQTLLFSATVPPWVYQTAVKYMRKDLKKVDLVGRDRMKTATTVQHLAINCSYFDRPQ
VISDVIKVYGGLDGRCMVFCETKRDANELAMSSDVKQETQVMHGDIPQTQREVTLKGFRE
GKFQCLVTTDVAARGLDIPEVDLVIQCNPPRDVDSYIHRSGRTGRAGRNGVCVCFYKRQE
ERDLQKVEYKAGIKFKRVSAPQPSDIIKSSVKDVTDLLGAVQPEMVAMFKSAAEAIIAEK
GAVAALAAALAHITGSTAMKTRSLLTAEEGKTTFLLETQSQLMDIGDVFKTLGRYIDRDS
RNAIKGIRLCKDQTAAVFDVSDDHKDYLLSLWQDTSEAQLTIATELPELLVPTQSGSFDD
RRGGGGYGGGRGGGYRRGGGGGGWGNRSGGGGRGRGGGGGYGGRGRGGWSGSYKKF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccattgaaatgtcgcagcaaataccagaaatcgcaatggtgaatggtgatgat
gtatcattaaatggagaaattcgtaagaaaaagaaatcaaagaaggaaaagaaaattaaa
tctgatgatgcagaaatagaatctccttctaaagaggaatcaccatcagaggagaaacca
aagaagaagaggaaaaagggctctgatgaggaaggagaagatgaaatcaagaagaagaaa
gtgaagaaagagaagaatggagaggttcaacagaatggcatcgtaaaggaaaagccatca
tcatcaaagcagggagaagtagatgaagagacccaagaaaagataggagccttctcaaat
tttggcataagacccaaaaccattgagaaactgcatgccaaaggagtcaaatacctgttt
cccattcaagcccagactttcaagccgattgatgatggttttgatgtcatagcacaagca
cgaactggaaccggtaagactttatcctttgttctcccgctggtcgagaaatggcagcag
ttccctcagaagagcggccgacaacccatcatcctcgcccttgctcctaccagagaactc
gccaagcagatatcggagtactttgaagccattggtccgcacctcagcaccacctgcatc
tacggaggcacctcctactggccccaggagtcggccatccggcggggtctggacgtcgtc
gtgggaacgcccggacgcatcctggactacatccgcaagaacaccctggacctgtccaag
ctgaagcacgtcgtgttggacgaagtggatcggatgctggacatggggtttgcggaatcg
gtggaggagatcctcggtgctgcttacaagactggtcaacctggtgatggagaggaagcc
cctaacaacccccagacactgctcttctcagccactgtccctccctgggtctaccagact
gcagtcaagtacatgcgcaaggatctcaagaaggtcgaccttgtaggtagggacaggatg
aagacagctacaacagttcagcatctggccatcaactgcagctattttgaccgaccacag
gtcattagtgatgtcatcaaggtttacgggggtttggacggccgctgcatggtcttctgt
gagaccaagagggatgccaacgagctggccatgagctctgacgtgaagcaagagacgcag
gtcatgcatggagatatacctcagacacagcgagaggtcactctaaagggtttccgagag
ggcaagttccagtgtctggtcaccactgacgtagcagcgagggggttagacataccggaa
gttgatctagtcatccagtgtaatccgccgagggatgtggattcttacatccatcgatca
gggaggaccgggagagctggtcgtaatggagtctgtgtctgtttctacaagcgacaggaa
gagagggatctacagaaagtagaatacaaagcgggcatcaagttcaaacgagtgtcggct
ccccagccaagtgacatcatcaagtcatccgtcaaagatgttacagatttactgggcgct
gtacagcccgagatggtggctatgttcaagagtgcagcagaggccatcatagctgagaag
ggggcggtggcggcgctagcggcagctctggctcacataacaggttccacagccatgaag
acaagatcactgctaacggcagaagagggtaagaccacgttcctccttgagacgcaatcg
cagctgatggacatcggtgatgtcttcaagacccttggacgctacattgaccgtgactca
cggaatgccatcaagggcatccgtctgtgcaaggatcagactgcggcagtctttgatgtt
tcagatgaccacaaggactatctactgtcattatggcaggacacgtctgaagctcaactc
accatcgcgacagaactgccagagctcctcgtccctacccagtcgggatcctttgacgac
cgaagaggaggtggaggctatgggggaggaaggggtggaggatacaggagaggaggagga
ggaggaggatggggtaacaggagtggtgggggcgggagaggtcgagggggaggaggagga
tatgggggacgaggaaggggaggatggagtggaagttacaaaaagttttaa
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