Strongylocentrotus purpuratus (purple sea urchin): 581691
Help
Entry
581691 CDS
T01019
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03440
Homologous recombination
spu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
581691
03450 Non-homologous end-joining
581691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spu03032
]
581691
03400 DNA repair and recombination proteins [BR:
spu03400
]
581691
DNA replication proteins [BR:
spu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
581691
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
581691
BRCA1-C complex
581691
NHEJ (non-homologous end-joining)
MRX complex
581691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
AAA_15
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_16
ABC_tran
AAA_13
Motif
Other DBs
NCBI-GeneID:
581691
NCBI-ProteinID:
XP_030837044
UniProt:
A0A7M7NMW0
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MSSVEKLSIQGIRSFGQDDGDRQVIQFFHPLTLIVGQNGAGKTTIIECLKYICSGEFPPG
SKGAAFIHDPKVAHETEVKAQVKLRFKDKAGKDVVVTRSLVATQKIKKIEFKSLEGTILR
VDNFGEKHSISSRCAEIDREMVESLGVSKPVLSNVIFCHQEDANWPLSDGKTLKGKFDEI
FAATRYIKALETIRKLRTEQSGQIREYILETRHLKDWREKAKQLSRELDDKKARLEAAEG
SVTKINDQLKPVEEQYDDLVRKSYQITKLANEVAKNEGEKDQLIKGMKSVEDQLEIIFQG
SVDELRRIYSAHQSKITEKEHQLQENEGKKRILQESAQRTSSEKSKLLVIQGVLQQEAQQ
QQETIRRRDHRMRGLATQLHLLGYSETGEFTSSRAGDFMEEVKEWTEAQRGEAERIKIQH
EEKEKGVDKQSQDLRATYTGLETTIKMKMATINDNTSKLREIKGELSTMGESSQRLKELE
NEKKTAESELTQLEGSLNVDDIKQEIDSLQREAKQYDKRMSQLTNELTTISSQSQARAKL
EMMQKEKTIKENQIRSLRGKRDEEMLHLLGHFPSENIRTKLSNYLVEKTEEVKRCNNKLQ
HARMDLSAKQANKKTIMDQLKKKEDELRSNTDQLMSACGSEDIDESIQQITQSINSLQNE
RGALTGSKHLFDRYIQSLQRTDALCPLCHRGFDSGVEVQELVQELQDKLRLAPSKLAEKE
RTITKQREKSDRLLVLRPIKDAAKKLSEREIPDLKLKLSAVNADIEKLNATVMEAEDNVS
MLQVDEAMARDMKPDIQILEKTLTELRDLERKIGEQSKYFSGSDISRTLQQVNTETAEVK
IKLNTVRSTLELKQRQRQEHVDNVNMMRISINSITSETLRLSAKLQKREKLESEQAELST
NTRTFQREIEDSRQEQRPIKDKLQKLAQDKVAITQKKESEIKEIREKIDEVQQQLRDIRA
GTSNIAKYVTDGKESKLDDVEVKIMDLNEKLTKLGEDLSLMTATIEQLKDDISNQKVKEM
ELGNNMRLKKYQQEVEKKSGEIEKLQEKLGGYNLITIEREKTEMEKKKASLNREKNQLDG
RSTELRKEVTRQERELESDSYKNAEKNYNDMMIKCRTTEIANKDLDKYYNALNSAINTYH
SQKMSEINKIVRDLWRMTYKGSDIDFIEICADDETGASTTQRRQYNYRVVMVKGDTALDM
RGRCSAGQKVLASLLIRLALAETFCLSCGILALDEPTTNLDRDNIESLAHALVDILKSRE
NQRNFQLLIITHDEEFVELLGHSDYTDNYYRVTKNNDYKSTVVKYDIATLQATQPV
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgttgagaaattgagcattcaaggaatcaggagttttgggcaagatgatggt
gaccgtcaagtcatccagttcttccatcctctaacactcatcgtgggtcaaaatggagcg
gggaaaacgacgattattgaatgcctgaaatacatctgttcaggtgaattccctccaggg
agcaagggagcagctttcatacatgaccctaaggtggctcatgagacggaggtcaaagct
caggtcaagttgcgtttcaaggacaaggcggggaaggatgtcgttgttaccagaagtttg
gtagctactcaaaagataaagaaaattgaattcaaatctttggaaggaactattctgaga
gtggacaactttggagagaaacacagcatcagttcaagatgtgcagaaatagatcgagag
atggtggagagtcttggtgtgtccaaaccagttcttagcaatgtcatcttctgccatcag
gaagacgctaactggcctctcagtgatgggaagacactcaaaggaaagtttgatgagata
tttgctgccaccaggtacatcaaggctctcgaaacaatcagaaagttaaggacagagcag
agcggtcaaatccgggagtacatactagagacgagacatctgaaagactggagagaaaag
gctaagcagctatccagagaattagatgacaagaaggcaagattggaagcagccgaagga
tcagtcacaaaaatcaatgatcagctaaaaccagtcgaggaacaatatgatgaccttgta
aggaaatcctatcagattacaaagctggcaaacgaagtcgctaaaaacgaaggagagaag
gaccagctgataaagggcatgaagagtgtggaagaccagctggaaatcatcttccaaggg
tctgttgatgaattaagaaggatctacagcgctcatcagagtaagattactgagaaagaa
catcaacttcaagagaatgagggtaagaagaggatacttcaggagtcagcgcagaggaca
tcaagtgagaaatccaagctactcgtcattcaaggagtccttcaacaagaagctcagcaa
caacaagagacgatccgtcgacgagaccataggatgcgtggcctagcgacccagcttcat
ctccttggttacagtgagacgggagagtttacctccagcagggcgggtgatttcatggag
gaggtgaaggaatggacggaggctcagaggggagaagcagagagaatcaagattcagcat
gaagagaaggagaagggggttgacaaacagtcacaggatctcagagctacctacacaggt
ctagagacaaccattaagatgaagatggctaccattaatgataatacctctaagctgcga
gagatcaagggagagctaagcacgatgggagagagttcacagagactcaaggagctagag
aatgagaagaaaacagctgagagtgagctcactcagttagagggcagtctcaatgttgat
gacatcaaacaagagattgattctttacagagagaagcaaagcagtatgataagaggatg
tctcagctcacgaatgagttgacaaccatctcatctcagtcacaggctagagctaaactt
gagatgatgcagaaagagaaaactatcaaagagaatcagataagaagcctgagaggaaag
cgtgatgaagaaatgttgcatcttcttggtcacttcccatcagagaacattagaaccaag
ctctccaattaccttgttgagaagacagaagaggtgaagagatgtaataataaacttcag
catgccaggatggatctctcagctaagcaggccaacaagaaaacaatcatggaccaattg
aagaagaaagaagatgaactgagaagcaacacagatcagctgatgtcggcttgtggaagt
gaagatatcgatgaatctattcaacaaatcacacaatctatcaacagtcttcagaatgag
cgtggagcgttgacaggtagcaagcatctgtttgatcgatacatccaatctttgcaacga
actgatgcactctgtcctctctgtcatcgtggctttgattcaggagtagaggtccaggaa
ctcgttcaagagcttcaagacaaacttcgcctggctccaagcaagctagcagaaaaggaa
cgtaccattacgaagcagagggaaaaatctgatcgtctgttggtactcagaccaattaag
gatgctgcaaagaagctgtcagagcgagagatcccagacctcaaactgaagttatctgct
gtcaatgctgatattgaaaaactcaatgcaaccgttatggaggctgaagataacgtcagt
atgttgcaggttgatgaagcgatggcgagggatatgaaaccagatatccagatactagag
aagaccctcacagagctccgagacctagaacgcaagattggagaacagtccaagtacttc
tcaggatcagatataagcagaactcttcaacaagtcaacaccgagacagcagaagtcaag
atcaagttgaatacagtgaggagtaccctagagttgaagcaacgtcagagacaggaacat
gttgacaatgtaaacatgatgagaatcagcatcaatagcatcaccagtgagacacttcgt
ctatctgctaagcttcagaagagagagaaactagagagtgagcaagcagaactgagtaca
aacactagaacattccaaagagaaatagaggattccagacaagaacagagaccgatcaag
gacaagcttcagaagttagctcaagataaagttgctatcactcagaagaaagagagtgaa
atcaaagaaatcagagagaagattgatgaggtccagcagcagctgagagatatccgtgca
gggacatcaaacattgcaaagtatgtgacggatgggaaggagtctaaattggatgatgta
gaggtgaagatcatggaccttaatgagaagcttactaaattgggtgaggatctaagtcta
atgacagctactattgaacaactcaaagatgacatcagtaatcagaaggtgaaagagatg
gagttagggaacaacatgcgcctgaaaaagtaccagcaagaggttgagaagaagagcggt
gagatagagaagcttcaggagaaactaggtggttataatctgatcactatcgagagagag
aagacagagatggagaagaagaaagcttctcttaatagagagaaaaatcagcttgatggg
agatctacggagttgaggaaggaggtcacgagacaagagagggagctagagagcgactcg
tacaagaatgccgagaaaaactacaatgatatgatgatcaaatgtaggacaacagagatt
gccaacaaggatttggacaaatactacaatgctctaaatagtgctatcaacacttatcac
agtcagaagatgtcagagatcaacaagattgtacgagatctgtggcgcatgacatacaag
ggaagcgatattgacttcattgagatatgcgctgatgatgagacgggagcttctaccact
caacggaggcagtacaattacagggttgtcatggtgaaaggagacacagctctggatatg
agaggaagatgcagtgcaggtcaaaaggtgctcgcttctctcttgatacggcttgcccta
gcagagacgttctgtttgagttgtggaatcttagcgctagatgaacccactacaaacctt
gatagagacaacattgagagcttggcacatgcacttgtagacatcttgaagagtcgagag
aaccaaaggaacttccagctgctgatcatcactcacgatgaagagtttgttgagctgctt
ggtcactcagactacactgataattactatcgagtcaccaaaaataacgattacaagtca
actgtcgtgaagtatgacatcgccactctgcaagcaacacagccggtttag
DBGET
integrated database retrieval system
