Strongylocentrotus purpuratus (purple sea urchin): 581874
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Entry
581874 CDS
T01019
Name
(RefSeq) nucleoporin NUP188 homolog isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
581874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
581874
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
581874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
581874
NCBI-ProteinID:
XP_030852979
UniProt:
A0A7M7PQJ5
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MAVVTTSCQELLLIISGHSAIRDKELIKAELVNDKKKFLEGVLVFKKHNEESEKKLKEEK
AISELERKFLLQACRFLDLDALQCRELFDLYLLCAFRGTGKQLQAILKNERSVQAMLLKL
WEFYHADRLHLLQCIKHLANFWQDTEHPYQAQYADFVEELQSKGLFDKLLAQYKDRFSSP
APTKDKAGQLMTDRHRIRWCIQSLHEQSELLGIILLFLHASLTPMDKLLTIINLFQQQGF
GTRQPYRHLLDAEEMAQKLTNKIEFLCCVIVLECMDLFPLMGLTDKSSIENHPLIANEKL
SKEFSSAVQSLGQSPSHTPIQLAWMVIHTAAWPGKDTALVRRLGNQALRLHVFKYLTFGL
SKALPNDSSVESMACHSVIYSLMTVVLTVFQEDSLGGVQDLVQLSCQLLSQPHLCREFWT
TDLDGGFAALLQSSMASFPLEFSLPMKFLKALSTEGSKQIYQLLAHLPAFTEPLDNNRSS
DIETSAGDDVWKLVNDKVVCKAGKNSPGFVIPAGTLGQLEQRPDGPPLITWDVDYSGLQL
FQCVLDWLISAAPTTSPSDTLVQQAKDVIDLVEQMLQSDWSVSEYLQPITDCILPLISSL
VQIQRPPLHLIGSCVKCLNTMAKYDPEQLWQALQSTGFLPYTGTLYTQVGQAASGDGVFP
GSYGKVALEWEKQFGTYPVTLEFIKLVHTLIEGLASKNVSMATSQDLLACIIFLQRDIFT
TFQRWRYTDFKDKEKIGLSVMEVFHVVLHVVPTSPVSKKPVLGDEQPEGVSVRDACIYGL
LHTAAGQSLLTIAATGVDTIEQKQLECGSFLDVTPESQLVKLSLSILNRLLLLKPQQETG
SRSGSPTHSAPEQCPLEVALTSHSTGLPHQPHLVAVIAGYIYHRQDPRLPTLAVLLLRRL
AQVAPMSLFGCLGNQAPAFRDAFLFRLQTHSEDIRLRVGILELLAVSAETQPGFSELFLN
LQPKKDDPKGKKKKEKGAEKKSPKNEQQELEIGKISCIHAVLDILEESKQGTTHSPPDLH
CAALGFLQALWQDRRETALSILRKRSKFWSDVAAPLFKNPPAPEPESQVTSSLIKIRAHA
FRILALECFHAGQSGIPKDLDDVLKKLDEENRFQFWSKYVGEVLEAYAPTNVDVEEYTLR
EHEGLVLLQAWRTVLVVAASQKFKALSINETATQSTILNDLVAAIHKQAQNLDSIFNAKA
LALLSSVYLTLVTRWKCNLSGQWSKVKLLVGTLEAILASEDTPLLRRCQAAMMGALTNVL
RHRRLKQTKDKEGIELSLMERLLPPICVALQHSKTYHKPPKSVPQPPTQEVALDITMEDL
DRTGAAEELVLRSQGDKVTKAASTAPIQLPVIAAYLLDEVLLSQADHADQWMPLIREQSV
VSLLLSTLQACLQAKKGLHYVEAVMVLLKDLAAIPPTAEAVRITGYIQHTCLSLVWLHEN
VSEQDYTWSKKTKGEKPDGTSWLTIYVESISVTATLLATLSHAFLTDALDFFGVHRERMM
KCLESVYLLQSPLQLEEAQATTSLVYQLAHHTRQWRFNMPAELALLQETLARLTQSCVAL
LIRPRLLQHMLEMKTNAKDASQSQPLSQVMQKVPRRLLQHQVSTDQSDASISDDAQEVQS
RLLVIMSRTLASFRLFSPDLLESLLNQSLDVSEYPMLYCLGFSTPSLDQKTPASFGTLIS
CINWCLQMLPKLDVNKSPMKVLDQKPAASPSDAKTMQRPVLLFVLENAVHLIMAQGMRTF
RDPAVPTRDRQLLKRELGSELNTFLISLQRYFRRGKPGSPSDASPGTSSARLATGSATSV
MTKASLNAAFTEAKEQLFFKVVQIFVIQLSK
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagtcacgacatcctgtcaggaattgcttctgataattagtggacattctgcc
atcagagataaggaattgattaaagctgagcttgtaaatgacaagaagaagtttcttgaa
ggggtgctggtgtttaagaaacacaatgaggaatcagagaaaaagctcaaggaagagaag
gcaatcagtgaacttgaacgcaagtttcttctacaggcgtgcaggttcttggatctggat
gcattgcagtgcagggaactgtttgatttgtatctactctgtgcattccgaggaacagga
aagcaactccaggccatactgaaaaatgaaagaagtgttcaagccatgctgcttaaactt
tgggagttctaccatgcagacagactccatctccttcaatgcatcaagcacttggccaat
ttctggcaagacacagaacacccataccaggcccagtatgcagactttgtggaggaacta
caaagcaagggtctgtttgataaactcctagcccagtataaagaccggttcagttctcct
gcccctacgaaggataaggctggtcagttgatgacggacagacacaggatacgatggtgt
atacagagtcttcatgaacagagtgaacttctaggaatcatcttgctgttcttacatgcc
tctctgactccaatggataagctcttaacaatcatcaaccttttccagcaacaaggtttt
ggtacaagacaaccctacagacatctactagatgctgaagaaatggctcaaaaactcacc
aacaagattgagttcttatgctgtgtcatagtactggaatgcatggacctgtttccactg
atgggtcttacagataaaagcagtattgagaatcatcctcttattgccaatgaaaagttg
tccaaggagttttccagtgccgtccagtctcttggtcaatcacccagtcacacccctatc
cagctggcctggatggtcatccacaccgccgcctggccaggcaaggacaccgcccttgtg
agacggttaggaaaccaggctctgcggctccatgtcttcaagtacctgacctttggcctg
tccaaggctctgccgaatgacagctcggttgaatcgatggcttgccattctgtcatctac
tctctgatgactgttgtactcactgtgtttcaagaagattcactaggaggggtccaggat
ttggtccagttgtcctgtcagctgctatcacagcctcatctatgtagagagttttggact
actgacctagacggaggctttgcagccctgcttcaatcatcgatggcttccttccctcta
gagttctctttgccaatgaaattcctcaaggcgctgtctacagagggcagcaaacagatc
taccagttattagctcacctgccagctttcacggaacccctcgataataaccgtagctct
gatatcgagacgtctgcaggagatgacgtttggaagctggtcaatgataaggttgtgtgc
aaagcaggcaagaattctcctggatttgtgatcccagcaggaactcttggacagctagag
cagagaccagatggtccccctctcatcacatgggatgtggactacagtggtcttcagcta
ttccagtgtgtcttagactggctgatcagtgccgcgcccacgacatcaccatcagacacc
ttggtacagcaggctaaggatgtcattgacctggttgaacagatgctgcagtctgattgg
tcagtctcagagtacctccagccaatcacagactgtatactgcccctcatctcaagcttg
gtccaaatccagagaccacctctgcatctgataggttcatgtgtcaagtgtctcaacacc
atggccaagtatgaccctgagcagctttggcaagcactccagagtactggtttcttaccc
tacaccggtacactttacacacaagtgggacaagctgcaagcggtgatggggtgtttcct
gggagctatggcaaggttgctttggaatgggagaaacagtttggtacctaccctgtcaca
ctggagttcatcaaacttgttcacaccctcatagagggtctagcatcgaagaatgtcagc
atggcaacctcacaagatcttcttgcctgcatcatcttcttgcaacgagacatcttcaca
acattccagaggtggcgctacacagacttcaaggacaaagagaaaataggtctgagtgta
atggaagtgttccatgtggttcttcatgttgttcccacatcacctgtgtccaagaaacct
gtgcttggagatgagcagccagagggagtgtctgttcgagatgcatgcatctatggcctc
ctacatacagcggctggtcaatctctgctcaccattgctgctacaggggtggacaccatc
gagcagaaacagctagaatgtggaagtttcttggatgttacccctgagagccagctggtg
aagctctccctctccatcctcaaccgtctcctcctcctcaagccccagcaggagaccggc
tccaggtccggctctccgacccactctgcccctgagcagtgccccctggaggttgctctg
acctcccactccaccggcttgccccaccagcctcatttagtcgctgtgatagcggggtat
atctatcatcggcaggatccgcggcttccgacgctcgctgtgctcctcctcaggagattg
gcgcaggttgctcccatgtcattgtttggttgccttggaaaccaagctccagcattccga
gatgcttttctcttcaggcttcagactcattcagaggatattcggctcagggttggtatt
ctagagctcctggcagtgtcagcagagacccaaccagggttcagtgaactattcctcaat
ctccaacccaagaaagatgaccctaagggaaagaagaagaaggagaaaggagctgagaag
aagagtccaaagaatgaacagcaggagcttgaaattgggaagatcagttgcatccatgct
gtgcttgacatcttagaagagtccaaacagggcaccacccactccccccctgatcttcac
tgtgctgccctagggttcctccaagctctctggcaggacagaagagagacggctctcagt
atcctcaggaaaaggtctaagttttggagtgatgtagcagcgcctctctttaagaaccct
cctgcaccagagccagagtcacaggtaaccagctctctgatcaagatcagggctcatgct
ttcaggatactggcactagagtgcttccatgctggacaatcgggtataccgaaagacttg
gacgatgtcctgaagaagttggatgaagagaacagattccagttctggtccaagtacgtt
ggtgaggtgctagaggcttacgctcctacaaacgtagatgttgaagagtacacgttgaga
gaacacgagggactggtcctgcttcaggcttggaggacggtcttagtggtagctgcatca
cagaagttcaaagccttgtccatcaatgaaactgccacacaatccaccatcctcaatgac
ttggttgctgctatccacaaacaagcccagaacctggactctatcttcaacgccaaggct
ctcgctctgctctcatctgtctacctcacgctggtcaccagatggaagtgcaatctaagt
ggtcaatggtccaaggtcaagctcctggtaggcacactggaggccattcttgcctcggag
gacacgcccctattgaggcgttgccaggcagccatgatgggagcccttaccaatgtctta
agacacaggcgtctgaaacaaactaaggataaggagggtattgagctatcgctgatggag
agactcctacctccaatctgtgtagcattacagcacagcaagacctatcacaagcccccc
aagtcagtccctcaacctcctacccaggaagttgccttagacatcaccatggaagacctt
gacaggactggtgcagctgaggagctagtgcttcgaagtcaaggggacaaggttaccaag
gctgcaagtactgctccgatacagcttccagtgatagctgcatatctgttggatgaggtt
ctgttgagtcaagctgaccatgcagaccagtggatgcctctgatcagggaacagagcgtt
gtatcgctactccttagcactctccaagcatgcttacaggcaaagaagggcttgcattat
gttgaggctgtgatggtacttctcaaagatctagcagccattccaccgactgctgaagca
gtacgtatcactgggtacatccagcacacatgtctatctctagtatggctccatgaaaac
gtcagtgaacaggactatacatggagcaagaagacaaagggtgagaaaccagacggcacg
tcttggctgaccatctatgtagagtccatctcagtgaccgctacccttctggccacactc
agtcatgccttcttgaccgacgcactggacttctttggagttcatcgtgagaggatgatg
aagtgtctggagtcggtgtaccttcttcagagccccctccagctggaggaggcgcaggct
accacctccctggtataccagctggctcatcacacccgtcagtggaggttcaacatgcct
gctgaactagccctgctgcaggagaccctagcaaggctcacacagagctgtgtggcgctt
ctcataaggcccaggctactgcagcacatgctagagatgaagacgaatgccaaggacgcc
agtcagagccaacccttatcccaagtaatgcaaaaggtacctaggaggttactacaacac
caggtctcaaccgaccaatcagatgccagtattagtgacgatgctcaagaagtgcagtcc
agacttctagttatcatgagcagaacgttagcttcattccgcctcttcagtccagatctt
ctagaatcacttctcaaccagagtcttgacgtgtccgaatatccaatgctctactgcctt
ggcttcagcactccctctcttgaccaaaaaacaccagcttcatttggaacgctcatctca
tgcattaactggtgccttcaaatgctaccaaagctggatgttaataaatcacccatgaag
gtgttagatcagaaacctgctgcttccccctcagatgcaaagaccatgcaaaggccagtg
ctgttatttgttcttgagaatgctgttcatctgatcatggctcaggggatgaggacgttc
agggatccagctgtaccgaccagagataggcaactactcaaaagagaactcggttcagaa
ttgaatacattcctgatcagtctacagaggtatttccggcggggcaagcctggctctccg
tccgatgcaagccccggaacctcctctgcccgtcttgccactggctccgcaacttctgtg
atgaccaaggcctccctcaatgctgcattcacagaagccaaggagcaactcttctttaag
gtcgtccagatctttgtcatacagctgagtaaatga
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integrated database retrieval system
