Strongylocentrotus purpuratus (purple sea urchin): 581891
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Entry
581891 CDS
T01019
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spu03016
]
581891
Enzymes [BR:
spu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
581891
Transfer RNA biogenesis [BR:
spu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
581891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
581891
NCBI-ProteinID:
XP_786961
UniProt:
A0A7M7REK9
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MASKKLINLHFIAGQLCVWHADEVEILRSEHHIVGSLIGALPGAPRQNTQLGLPLQLMPE
EAAVLLQHGVARLVTMSVAKPSKLQVKEFNQQRMESMKEQKHLWQEQVVEQRENLKEVIE
EGRRKKKERKKQLRQKLSSTKGKDERDVPSIKEDNDSEEREKRTQESMCPGEMSIESRIE
EGKNHTMGGEEDIDGRLCASDVQGIEGESILKGKEGMSKMXSGNQPDGHDRRRMEDEEAK
GNETLEGQDTETIRKACGAVRLHEDESNVPRTKSSLNHDDGIGVTEECTNAELKRKKSPT
ECESEAVLASPHVGNECFADEENDEDGKRRSIEEEEDTVKEDGCSVQLCTAEPVDSKFIL
EAPPSAWRYPSTEREKLKCRVFQHFWEMGYYMTSGTKFGGDFLVYPGDPFLFHSYFIVVC
IPHHKQLSPLELVSHGRLGTFVKKAVVLCSVNSQKEVICTSIQWAGIS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaagaagctgataaatctacacttcatcgcagggcagttgtgtgtttggcat
gctgatgaagtggaaatactccggagtgaacaccacatagtaggttcgttgatcggtgcc
ttgccaggagccccccgacagaatacccagcttggtctgcctcttcagctcatgcctgaa
gaagctgcagttctccttcaacatggagttgccagacttgtgactatgtctgtagccaag
cccagtaagcttcaggttaaggaattcaaccagcagagaatggaatccatgaaagaacag
aaacatttgtggcaggagcaagttgttgaacagagagaaaatctaaaggaagtgattgag
gaaggaaggaggaaaaagaaggagagaaagaaacaattgcgccaaaagttgtctagtaca
aaagggaaagatgaaagagacgttccttcgataaaggaagataatgattcagaggaaaga
gaaaaaaggacccaagaatcaatgtgtcctggagagatgtcgattgaaagtaggatagaa
gaaggaaagaatcacacaatgggaggagaggaagacattgatggaagactctgtgcctcg
gatgtgcaggggatcgaaggagagagtattttgaaagggaaagaaggaatgagcaaaatg
tagtctggaaaccaacctgatggacatgatcggagaagaatggaggatgaagaagccaaa
ggaaatgaaactcttgagggtcaagacacagagactatcaggaaggcttgtggtgcggtt
aggcttcatgaagatgaatcaaatgtaccaagaactaaatcttcattaaatcatgatgat
ggaataggagtcactgaggagtgtaccaatgctgagttaaagagaaagaaatccccaaca
gagtgcgaaagtgaagcggtcttagcgtctcctcatgttgggaacgagtgcttcgctgac
gaggagaatgatgaagatgggaaaaggagatcgattgaggaggaagaggatactgtcaag
gaggatgggtgctcagtccagctttgtacagctgaaccagtggacagcaagttcatcttg
gaggcacctcctagtgcttggcgctacccctctacggagagggagaagctcaagtgcagg
gtgttccaacatttctgggagatggggtactacatgacgtcgggcaccaagtttggagga
gacttcctggtgtatcctggtgacccttttctcttccactcctacttcatcgttgtatgc
atacctcaccacaaacaactgtcaccactcgagctggtcagccatggcaggttagggacg
tttgtgaagaaggctgtggtcttgtgttccgtcaatagccagaaagaagtcatctgtacg
tcaattcagtgggctggaataagttag
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