Strongylocentrotus purpuratus (purple sea urchin): 582206
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Entry
582206 CDS
T01019
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
582206
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
582206
NCBI-ProteinID:
XP_030828530
UniProt:
A0A7M7MYK6
LinkDB
All DBs
Position
Unknown
AA seq
1781 aa
AA seq
DB search
MIMAEDLTALYIVLFLSAVASYGQLILAGSGACEGDSCYAGDLLIGREDKLFASSTCGLN
GREPFYIVSHLENRNREIFHCDSRTPWQEGVNDLNHEIKHVVTSMDNSQKKVRWWQSENG
LEQVYIQFDLEAVFHFTHLIMTFKSFRPKAMVIERSSDFGHTWKPYRYFAYDCAGSFPEV
SRAPIRNISQVICESRYSAVEPSTGGEVIFRVLPPNIPIEDPYSREVQDMIKVTNIRINI
TELHFLGDHLFDDGDEVFNKYYYALYEMVVRGSCHCFNHASRCVPADGMEFKQQMVNGQC
ECIHNTEGKNCERCEPFFNDQPWRPAGLRGENNECKRCNCNDHATSCHFDEAVYRLTNGA
SGGVCDNCLHNTVGRNCEQCKPFFFMHPDRDIRDPNICVPCNCDPAGSENGGECASHTQG
EMVAGMCLCKRYVTGQRCDTCQDGYWELNEANPEGCRECACDLLGSENNMGCDKSTGNCR
CKRYVTGQNCDRCYEGYYGLSADLYGCKQCECDPGGSYNNSCNQASGQCPCRRNIGERQC
GQVNSGYFYVNMDYYTYEAEYARAVGDLSLVDYYPRMRESEYIGWTGPGFMRVHEGGGIE
FTVSNLPMSGNYDLILRYEPLLPGVWEDVRITINRPGDIPTQSVCGNTIPQDDLLVTTLP
SGSRHVVLSNPVCLETGKTYTIRVDFTRYSSDNQDSNAQILLDSLVVMPRATIYPIFQGP
DPIEQYRREQWDYYRCGEAHMSAVHSPLSDICKELMFSMSALAFDGALPCQCDPTGSLSN
MCDETGGQCQCKPNVIGRTCNQCAPGTYGFGPEGCTPCDCDGTGSLNEFCNQLTGQCPCR
PNTYGQQCNECQPGFWNFPNCQRCNCNGHADICDPRTGECIDCQSNTAGFECESCKRGYY
GDPTRGSALPCQACLCPGGAGSGNQFAESCQLDQATQTVQCDCFSGYTGIRCDQCDNNYF
GNPTEARGVCNLCSCNGNTLSSTPGNCDARSGKCLQCLYNTDGFNCEQCAPGFYGDAIQR
TCRDCQCNVLGTDRSQCDLDNNCGVCDPVSGQCPCLPNVLGQQCDRCAQDHWKLASGTGC
EACNCCPYGAVSSRCDEFTGQCACRSGFGGRECCDCEANFWGDPRDGCYECDCDEQGSAT
SQCERATGQCVCLPGVTGYRCDQCARGTTGELPRCEPCGECFDDWDLTILHLRNETYDLI
ARARNIKVSGVSGVYDREFSRLEGLVDYAESLIRGAPSVTETDVDNIQSELDDIRATLEE
YRQQVQGLEDMQRRTRGNIARANRELDLLEREGDELQADAERLQRESYDFGTANVEGAMN
SILRSQNLSRAAEGRVDDTQPTLDQSAAVRQEVEDLIGERNAALESERQGYLDRLDDVDN
QLTGLEGLLAGLNEEICGSPGDSCDICGGAGCGQCGGLGCGGSVQKAEDALRRATEADQK
LDQKEEEARSMLDEMMQAKDRTGEAQDLAQQAYDQALLAKQEAEQGQINIKDLINNITDF
LGRSKSEPDDIRLLVNETLNTKISLSPEEIEDLAEQIEDIIATLENIDEIIAATRDDLQR
VNDLKARADAAREYAEGVLDSAEDVVRALNQAEAAQNIADNAINNATEDIEDAGDSLTSI
ESEARDAKDKSNNLLDKIEAMKAQLEGVQLKVTDNQEKVTQAVDLAEMAEGQALDVAGRV
EEMERDFNQTSDEVMAKVAEVEGAKGRADTLFLNVIAFEEKITKDYEDLQEMETTFNNNN
ATLHDLTAEIAALNMKMMQILMDIQTKAAYYRSCTESPTAP
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgataatggcagaagatttaaccgcactttatatcgttttgtttctctcagctgtagcc
agctatgggcagctcatccttgctggaagcggtgcatgtgaaggagacagttgttatgca
ggtgacttgcttataggtcgtgaagacaaactctttgcttcttcaacttgtggtctgaat
gggagggaacccttttacattgtcagccatcttgagaaccgcaaccgtgagatatttcac
tgtgactcccggacaccatggcaggaaggcgtcaacgacctcaaccatgaaatcaagcat
gtggtgacatcgatggacaactcgcagaaaaaagtaagatggtggcagtcggagaacggc
ttagaacaggtctacatccagtttgacctggaagcagtctttcatttcacccatcttatc
atgaccttcaagtccttcaggccgaaggccatggtcatcgagaggtcctcggactttgga
cacacgtggaagccgtacaggtactttgcctatgactgtgcaggaagtttccctgaagtg
tccagagcacccatcaggaatatcagccaggtgatctgtgagagcaggtactcagcggtt
gaaccatctacgggaggagaggtgattttccgcgtgctaccacccaacatccccatcgag
gatccttacagtagagaagtacaggacatgatcaaggtgaccaacatcagaatcaacatc
accgagctccatttccttggcgatcacctgttcgatgatggcgatgaagtcttcaacaag
tactactatgccttgtatgagatggttgtcaggggtagctgtcactgcttcaaccatgct
tcacgctgtgtaccagcagatggtatggagttcaagcaacagatggtgaacggacagtgc
gaatgcatccataacacagaaggaaagaactgtgagcgatgcgagcccttcttcaacgac
cagccatggagacctgccggattacgaggagaaaataacgagtgcaaaagatgtaactgt
aacgaccatgcaacaagctgtcattttgatgaagcagtataccggctgacgaacggtgct
agtggcggtgtatgtgataattgcttgcacaataccgtcggtcgtaactgtgaacaatgc
aagccgttcttcttcatgcatccagatcgcgacatcagggatccaaacatctgtgttcca
tgtaactgtgatcctgctggttctgagaatggtggtgagtgtgctagccacacccagggg
gagatggttgccgggatgtgcctgtgtaaacgctacgtgactggtcaacgatgtgacacc
tgccaagatggatactgggaactcaacgaggctaacccagaaggctgcagagaatgtgca
tgtgaccttcttggttctgagaataacatgggatgtgataagtctacaggtaactgcaga
tgtaagagatacgtcactggtcaaaactgtgacaggtgttacgagggttattatggcctg
agtgctgatctctatggatgcaaacaatgcgagtgcgatccaggcggttcgtacaacaac
tcgtgcaaccaggcatcgggacaatgtccttgccgacgtaacatcggggaacgccagtgc
gggcaagtcaactccggctacttttatgtcaacatggactattacacctacgaagcggag
tatgcacgagctgtcggcgatctttccttggttgactactatccacgtatgagagaaagt
gaatacattggttggactggacctggttttatgagggtacacgaaggagggggcattgag
tttactgttagtaatctcccaatgtctggtaactacgatctcatcctcagatatgaacca
ttgctcccaggcgtgtgggaagatgttaggattaccatcaatcgtcctggtgacatccca
acacagagtgtctgtggtaacaccatccctcaagatgaccttctggtgacaacactgcct
tcaggaagcagacacgttgtcctgagtaatccagtgtgccttgagacaggcaagacgtac
accatccgtgtcgacttcactcgatacagctctgataaccaggatagcaatgcacagatt
cttctcgactctttggttgtgatgccgagggcaaccatctaccctatcttccaaggaccc
gacccaatcgagcagtaccgtcgtgagcagtgggattactaccgatgcggagaggcacac
atgtctgccgtacattcacctttgtcagatatctgcaaagaactcatgttcagcatgtca
gcactcgcctttgatggcgcacttccgtgccaatgtgatccaactggctcactcagcaac
atgtgtgatgagactggtggacagtgccagtgcaaacccaatgtgatcggtcgtacctgc
aaccagtgtgctcctggaacgtatggctttgggcccgaaggatgtactccctgtgactgt
gacggaactggctcactgaacgagttctgcaaccagctaacgggccagtgcccctgcaga
cccaatacatacggacagcaatgtaatgaatgtcaaccaggattctggaacttccccaac
tgccaacgttgtaattgcaatggacacgctgacatttgtgatccacgtacaggagagtgt
atcgattgccagagcaacaccgctgggtttgaatgtgaaagttgcaagcgtggttactat
ggagatcccacaagaggctctgcgttgccatgtcaggcatgcctttgcccaggaggagcc
ggtagcgggaatcagtttgcagagtcttgtcagttagaccaggctactcaaactgttcag
tgtgattgcttctcaggatacacaggtatccgctgtgaccagtgcgacaacaactacttt
ggcaacccaactgaagctcgaggtgtttgtaacctttgcagctgtaatggtaacacccta
tccagtacaccaggaaactgtgacgccaggagtggcaagtgcttgcaatgtctctataac
accgatggcttcaactgtgaacagtgtgctccaggattctatggagatgcaatccaacga
acatgcagagattgccagtgtaacgttctcggaacagaccgctcacagtgtgacctggat
aataactgtggtgtttgtgaccctgtaagcggtcagtgtccatgtctacctaatgtactc
ggtcagcagtgtgaccgttgtgctcaagaccattggaaactggctagtggcacgggatgt
gaggcgtgtaactgctgcccatatggagcagtctcatcaagatgcgatgagttcaccggt
cagtgtgcctgtaggtctggctttggtggaagggaatgctgtgactgtgaggctaacttc
tggggagatcctagggatggatgctatgaatgcgactgtgacgagcaagggtcagctacc
agccagtgtgaacgggctacgggacagtgtgtatgtcttccaggagtcacagggtacagg
tgcgaccagtgtgcgcgtggcaccacgggagaactgccacgctgtgaaccgtgtggagaa
tgcttcgatgactgggatctcaccatcctccatctcagaaatgagacttatgatctgatt
gctcgcgctcgaaacatcaaggtatctggagtgtcgggtgtctatgatagagagtttagc
cgtcttgaaggtctggtagattacgctgaatctctgatcagaggagcaccctctgtgacg
gaaacggatgtagataacatccagagtgagctagatgatatcagagcaactcttgaagaa
taccgtcagcaagtacagggtctggaagatatgcagaggcgtacccgtggcaacatcgct
cgcgcaaaccgggagcttgatcttctagagagggaaggcgacgagctgcaagcagatgcc
gagagattgcagagagaaagctatgattttggaacagcaaatgtagaaggtgccatgaac
agcatcctgcgcagtcagaacctatcccgtgcagccgagggtcgtgttgatgacacccaa
cctacgctagaccaatcagcagccgttcgtcaggaggtagaagatctgattggtgaacgg
aacgcagcccttgagagtgagaggcagggatatctagacaggttggatgatgtggataat
caattgacaggattagaaggacttcttgcagggctcaatgaagagatctgtggctcaccc
ggagattcctgtgatatttgtggaggagcagggtgtggccagtgtggaggactggggtgc
ggtggctccgttcagaaagcagaagatgcactccgacgagcgacagaagcggatcagaag
ctggaccagaaagaagaggaggctcgtagcatgctggatgagatgatgcaagccaaggac
cgtactggtgaggcacaggacttggcccagcaagcatatgaccaagcactcctagctaaa
caagaagcagaacaaggacagatcaacatcaaagacctcatcaacaacatcacagacttc
cttggacgatccaagtcagaacccgatgatataagacttcttgtgaacgaaaccctgaac
accaagatctctctctcaccagaagaaattgaagaccttgccgagcagattgaagatatc
attgcaaccttggagaatattgatgagatcatcgcagcgacccgagatgacctccaacgt
gtcaatgacctcaaagctagagcagatgcagccagggagtatgctgaaggtgtattggat
tctgctgaggatgtggtacgtgctttgaatcaagcagaggctgcgcagaacattgccgat
aatgccatcaataatgctactgaagacatcgaggatgcaggagattctcttacttcgatt
gaatctgaggcccgcgatgccaaggacaaatccaacaaccttcttgataagatagaagcc
atgaaagcgcagttggaaggtgtccagctcaaggtcacagataaccaggagaaggtcaca
caggcggttgacctggcagagatggccgagggtcaggctctagatgttgcaggcagagtt
gaggagatggagcgagacttcaaccagacatccgatgaggtcatggctaaggtcgcagag
gtcgaaggggccaaaggtcgtgcagacactctcttccttaatgtcatcgcatttgaggaa
aagattactaaagactacgaggatctccaagaaatggaaactacctttaacaacaacaac
gccacactgcacgaccttacagcagaaatcgctgcattgaatatgaaaatgatgcagata
ctaatggatatacaaaccaaggcagcttattacaggagctgcactgagagtcctactgcc
ccataa
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