Strongylocentrotus purpuratus (purple sea urchin): 582353
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Entry
582353 CDS
T01019
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
582353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
582353
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
582353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
EIF3I
DUF6528
Beta-prop_EML
Beta-prop_HPS5
PorZ_N_b_propeller
Motif
Other DBs
NCBI-GeneID:
582353
NCBI-ProteinID:
XP_030845948
UniProt:
A0A7M7P4E2
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MCSLAEGPPPPAEGCITVCEENGDLVTIQARNAPVNYTPRIAGFEYPSISTSTESLCSLA
SDEAAQSAFQPHVDEVSLWKQAWYTCRVHGLTEMLDELSKNETAPWPVTTLACGCLTTVT
MVNLFRGSLYPHLMLSPEEMIHEFSAAKDWQDSEIRAFAWHQHTNKCAVAWKDNTIKIFI
SGSDVVPTLKHRQQRGVSCLAWKPLSATVLAVGCRGCILIWHIDPNSLSTRPTASAAQVL
SHNGHAPITCLSWDPRGRLLVSSSPRDTAILVWDVPREACVPLKRTSGGGVALLRYSPDS
SKLFASSPSQVFRVWETRTWTCEKWTQLSGRCKSACWSPDGRFLLFCTEDEPAIFALNFI
HSGSKTGGAESAIKCADVSELFIKDEIYGTRVGGLIQDMVWDNTGERLAVLFKSNKETGN
TGELIALFNTRLTPTLQLIPSGFVRGEPGEVPELISFKPNFNHGALLTICWHSGKVTFVP
LLFIPSSTLAENGRIPAHFTQKSTPLPQELFSVSNSKK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcacttgctgagggaccacccccgcctgcagaaggctgtattacagtttgtgaa
gagaatggagatttggtcaccattcaggccaggaatgcccctgtgaactacacaccaagg
attgctggctttgagtaccccagcatcagtacctcgaccgagagtctctgctctctggcg
tcagatgaggcagcccagtcggcgttccagcctcacgtggatgaggtgtcgctatggaaa
caagcctggtatacctgcagggttcatggcctgaccgagatgctggatgaactctccaaa
aatgagacagctccctggcctgttaccacgcttgcctgtggatgtcttactactgtgacc
atggtcaatttattcagaggctcgctctatcctcacttgatgctctctcctgaagagatg
atccatgagttcagtgcagctaaggattggcaggacagtgagatcagagcgtttgcatgg
caccaacataccaacaagtgtgctgtagcatggaaggataacacaatcaaaatcttcata
tcaggaagtgatgtagttccaacactgaagcacagacaacagcggggtgtgtcttgcctg
gcatggaaacccctgtctgcaacggtattggctgtcggttgtcgtggttgcatactcatc
tggcatatagaccccaactcattatctaccaggccaactgccagtgcagcccaagttctt
tcccacaatggtcatgcaccgataacctgtctaagttgggaccctagagggcgtcttcta
gtttcttcatctccaagagatacagccatactggtgtgggatgtccccagggaagcatgt
gtgcccttgaagaggaccagtggagggggcgtggccctgctgaggtactccccagatagc
tccaagctctttgcctcctctccttcacaggtattcagagtttgggagacaagaacctgg
acgtgcgagaagtggacgcagctctctggtcgatgcaagagcgcctgctggagccccgac
gggcggttcctcctgttctgtacagaggatgagccagccatcttcgctctgaacttcatc
cacagcgggagtaagactggcggggccgagtcggccatcaagtgtgctgatgtctcggaa
ctcttcattaaggatgagatatatggaacgagggttggtggtttgatccaagacatggta
tgggataacaccggagagaggttggctgttctcttcaaaagcaataaggaaacgggcaat
accggtgaactcatagccctattcaacaccagattaacacccactctgcaactcattccc
agtggttttgtacgaggtgagccaggagaggttccagagctgatctccttcaaaccaaac
ttcaatcatggtgcccttctcacaatctgctggcatagcggcaaagtgacctttgtccct
ctgctcttcataccctcttctaccctggccgagaatggaaggatcccagctcacttcact
cagaagagcacccctcttccacaagaactcttctcagtgtcaaactcaaagaagtga
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