Strongylocentrotus purpuratus (purple sea urchin): 582919
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Entry
582919 CDS
T01019
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spu03009
]
582919
Ribosome biogenesis [BR:
spu03009
]
Eukaryotic type
90S particles
Other 90S particles
582919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD_LRWD1
WD40_like
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WDR54
VPS8_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
582919
NCBI-ProteinID:
XP_011676652
UniProt:
A0A7M7HNW7
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MSFFIRGARKRAPASKSKKVFSKDSNNPTKKKKLQKLDDEEILSDSDIDGPDDDEGRGSS
DAPSENEEEEQETAQEKRLRLTKQYLAQLEAEEKEVEDSLTPDRDAIAHRLKSELLEQSG
KLQKLVASEYTAPSSDDLCVLRGHQLAITCMVISSDNKYIFSGSKDCSIIKWNAATGKKE
HKIPGGRKGTEDKHIGHTAHILALAISSDDTLLVSGCRNKLIHVWDPQTCGLKHTFKGHR
DAISGLAFRKGTHQLFSASHDRSVKIWNLDEMAYVETLFGHQDAITGIDSLTRDRSITSG
GRDNSIRVWKVLEESQLIFNGHSGSIDCVKLINEDHFISGSEDGSIAVWSVMKKKPLSIT
RNAHPGPVGTSEGSNTKENWISCVAALQGTDLVASAGSKDGTIRFWQCSEGYKTLSPTFQ
VTMEGFVNAMQFSSDGTFLVAGVGQEHRLGRWWRLKEAKNSIVIVRLRKSNAENIR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctttattcgaggagcaaggaaaagggcaccagcaagtaaatccaaaaaggtt
ttctctaaggatagcaataatccaactaagaagaagaagctccagaagctggatgatgaa
gagattctgagtgattctgacattgatggccctgatgatgatgaggggcgtggttctagt
gatgctccatcagagaatgaggaggaggagcaggagacagcccaggagaaacgtcttcgc
ctcaccaagcagtacctggcacagttagaagcagaagaaaaggaagttgaagattccctc
accccagacagggatgctatagcacacaggctaaagtcagagctgttggaacagagtgga
aaacttcagaagcttgttgcatcagagtacacagcaccctctagtgatgacctctgtgta
ttgcgaggtcatcagctggccatcacatgcatggttatatcatcagacaacaagtatatt
ttcagtggtagcaaagattgctccataattaaatggaacgctgcaactgggaagaaagaa
cataagattccaggtggaaggaaaggaacggaggacaagcacataggacatacagctcat
attctagctctggctatctcctcagatgacactctcttagtgtctggatgcagaaacaag
ttgatccatgtatgggatcctcaaacatgtggtctcaaacacacattcaaaggtcatcgg
gatgctatatcaggcctagctttccgtaagggcacccatcagctattcagtgcatcacat
gaccggtcggtgaagatttggaatctggatgagatggcttatgtagaaacactatttgga
catcaagatgctataacaggtattgatagcttgacaagggaccgttccattacatcagga
gggagagacaactctatcagggtatggaaggttctagaagaatcccagcttatctttaac
ggccactcaggatccatcgactgtgtcaaacttatcaatgaagatcatttcatctctggc
tcagaagatgggtccattgctgtgtggagtgtcatgaagaagaaacctttgagcataaca
cggaatgctcaccctggaccggttgggacatctgagggaagcaataccaaagagaactgg
atatcatgtgttgcagccttgcaaggaaccgaccttgtagcatcagcaggatccaaagat
gggaccattagattctggcagtgctccgagggctacaagacactgtctccaactttccag
gtcacaatggagggctttgtaaatgcaatgcaattttccagtgatgggacatttcttgta
gccggtgtagggcaggagcatcgcctgggccgctggtggcgtctcaaagaagcaaagaac
agcattgtcattgtcagacttaggaagagcaatgctgaaaatatcagatga
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