Strongylocentrotus purpuratus (purple sea urchin): 583248
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Entry
583248 CDS
T01019
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
583248
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
583248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Cohesin_load
Motif
Other DBs
NCBI-GeneID:
583248
NCBI-ProteinID:
XP_030832481
UniProt:
A0A7M7N7V5
LinkDB
All DBs
Position
Unknown
AA seq
1877 aa
AA seq
DB search
MEELTQKLNFDAIGIQCQTVKRICQSIKERRAHLIGDEPISAATRKIEKLELLWSKCRDG
SPRQSSLCSHALIELWEDGVLQQDYILQEFINLVPTARTVKPCVDAVGKLLLMLVKKSLF
GVMGSGDEVVPENRCYFYMRTRPHPFISMYKSRPDCWSSILETVSSLLSQDNDRLQTEVL
HILKSFIKYALLDPLIDPKQGSLRVLLAESLAQACRPRLIPQSSPQAKEVLPLFLGEVVK
FLLECMPCLPTSTCDAVTEAAHLATVTMDIISGYAPSIDVNLVGQSIYYCLSLGHQLEEL
GMDMSPVLRLLAGMNPGHMKFQDVAIIAMIANLLLIGSIQEQNFILQFALKFFGSPAGPT
RSRTKKLLVWSLIQVLDHLLGRSTIELKSLEVSVRKENCEMALKLFHDITAIRLTPLVEG
SGDVPDKIVHFHGVHPWHNTMSVFQETAVTVLSNVNTAQNWLCCQKAKVHAGIGDTDMEE
TIQLTVAILFSFGHQLAHLCIDVLVDVGNVAPAKAYSMVPLFMYTLRKIRVPAMSTYLIK
ALPRLVGHRYLISPVFKLVLNSNLDAMSLKLVTDLWKKQDRIFPELQMKLAECEKSIGHL
NPHTGLDDMLLEIAICVCEVCTHRPVQHGADMVRTLSMVLKKATGPRGVPATCYALDALI
SITKAEDVVDIITAYKGLAGQFQAEERPMVIAKWCEFLGLVPELHVDSKKYEGFTRAVIN
QLWLYTAHPDHRVVSESLSALAAFKICSFEIRHLPREATKDVQTKRAQDRKRRADARTSR
GEEEEEDEEEEEEDLSIPGSCFINLLPCVNQEATSGKGELLHSFLCDELVELPRRYYSQT
SPRQAATESNVSKQVSGIPSVISLKNLNNKQPGHRPSYAAGLLFSFKPGSKSSRDPKKAR
KNKTALSQVCLDELTLLLNEVPVSSPDWFYIMQLPSAWASFMSTALQAVIEGRRSEVEHE
ACRGRDGPDEEKQKEGLASAWLWARDRLTEQLRTTVLKNSGARGNAILALGGLAHAVSAY
VVQLGEEATLSQRSASQYEGHKSWITRVVDSFQVAMDSIHTAQSVFKFCQHHSRDHSQAT
GEQVHSCAALALPLLASHIMTMPTNAISQVIDRMMSLSSAQPSSVPIHHGLGVGMLLARL
CVEHFTDMTGTEGDNVLSRYFDKLENTVLTQNNNPQGHVIGCTLGLGVALSGLTHESTTH
AKVHVLKVRGDLLSKIESLGNSASCLTEAQVLCVALVTAACYQVNYITSQEALHTAKMLQ
TMAQNNLKCIPLAVGTGLLMHSLTRIGHQEVIPLYNNQQAELLRLLTDKDSSIDLIKSSV
AGLVALLVGPGHLVQSERRPGPEHRGLSSAVKMLCQLLSDTSDLRLQHSLPWLLGYLYMG
STDVTEARSSVPSNYNNLEESSLLRAAVDMLIAAGRLGSEVVPSRHVLTVLKVLHECSES
CKKALPPVNWAVVLNPIMRNNSYANGAIYYECMKLAVGQCAVVRSAALQSNASFVASWLS
PSVYLTIKESCEKHLFQSLHILVGCIPLEILKAFLSGQLVGLFQHSNTHFTHCITALHGL
NLAAQVPDPAHGVVNLLNETARKIFASLPFDKEYDCLLHAHFAEFIKYLPMEFLEEVTQM
KDHLLKPSFIRGYLVKQGLQPVQWLKDCVDEAMNVGSESDQSVILWFLMIALGQTPSQLP
VQEREMWLQQLMNHLKTIAFGRESTPSSSTREPHQRINFLLEVFAISIVTWSSPEFTHIC
GPHPHHYVYGTSQGTGQLAAGIEGGEEELSSTESCESTPDWLQQVNENSPLGCGEYGRQT
VQRVKGFLPGALCRLVSKAPWDGMRGKIIEWLINMSIDSKNELVTEPMRRELKGCLYALR
HYNEFRANSQWMKIFDK
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttaacgcagaagttgaactttgacgcgataggaattcagtgtcagacggtg
aagagaatctgtcagtctatcaaagaaaggagagcacacctgatcggtgatgaacctatt
tctgctgcaactcgtaaaatcgaaaaattagagctgctgtggtcgaagtgcagggatggt
tcacctcgccagagctccctgtgctcccatgccctgatcgaactctgggaagatggcgtc
ctacagcaggactacatccttcaggagtttatcaacctcgtacccacggccaggaccgtg
aagccatgcgtggatgcagtgggtaaactgctccttatgttggtgaagaagtctctgttt
ggagtgatgggtagtggggatgaggttgtgccagaaaatcgctgctatttctacatgagg
actcgtccgcatcctttcatatccatgtacaagagtagaccagattgctggtcctctatt
ctggaaaccgtctcctctttgctctctcaagacaacgatcgcttgcaaacagaagtcctt
cacatcttgaagtcgtttatcaagtatgcattgctggaccctctcattgatcctaaacag
ggatctcttagggttctacttgcagaaagtcttgcccaagcatgccggcctagattgata
cctcagagtagccctcaagctaaagaagtattgccactgttcctcggcgaggtggtaaag
tttttgttggaatgcatgccatgcctgccgacatctacatgcgatgcagtcaccgaagcg
gcacacctagcaaccgtaaccatggacatcatctccggttacgctccatctattgatgtg
aatctggtgggacagtcgatctattactgtctctcactgggccatcaactggaggagcta
gggatggatatgtccccggtcttacgcctcctggcagggatgaatccagggcatatgaag
ttccaggatgttgcaatcatcgcgatgatagcaaacctgttgttgattggctccattcaa
gaacagaatttcatactgcaatttgccctgaagttctttggatcccctgccggccccacc
cggtccaggaccaagaagctgctggtatggtccctgatccaggtcctggatcacttgctg
ggccgttccaccatagagctgaagtctctggaggtctctgtgagaaaggaaaactgtgag
atggcgctcaaactcttccatgatatcaccgctatccgactgactcctttggtagaagga
agtggtgatgttcctgataagattgtccattttcatggagtccacccgtggcacaacaca
atgtctgttttccaagagacggcggtcaccgtcttaagcaacgtgaacacagcccaaaat
tggctctgttgtcagaaagccaaggtgcatgctgggattggcgatacagacatggaagag
acgatacagttaaccgtagccatcctgttctcttttggtcaccagctggcccatctctgt
attgatgtgctggtcgacgttggcaatgtagctcctgcaaaggcttacagcatggtgcct
cttttcatgtataccctaagaaagatcagagtgcctgcaatgagcacatacctgatcaaa
gccctgccgaggcttgtgggtcatcgctacctcattagtcctgtctttaagcttgtcctg
aatagtaatctggatgccatgtcactcaaactagttacagacctctggaaaaaacaggat
cggatatttcctgagctgcagatgaaactagctgaatgtgagaaaagcatcggtcatctg
aacccacacacagggctagatgacatgctcttagagattgcaatctgtgtttgtgaagtc
tgcacccacagaccagtgcagcacggtgcggacatggtgcggaccctatcgatggtcttg
aagaaagccaccggacctcggggagtccctgctacctgttatgccttggacgccctgata
tctatcaccaaggcagaagatgtggttgacatcataacagcgtacaagggtctagcaggg
cagtttcaagcggaggagaggcctatggttatagccaagtggtgtgaatttcttggactg
gtcccagaattgcatgtggattccaagaaatatgagggatttacaagggcagttattaat
caactatggctttatacagcgcatccagaccacagagttgtttcagaatctctatcagcc
ctagcagcattcaagatatgttctttcgaaatccgtcatcttccgagagaggccacaaag
gatgtccagacgaagcgggcccaagatcggaagaggagggctgatgcgagaacatcaaga
ggtgaagaagaagaagaagatgaggaggaagaggaagaagacctttctatacctgggagc
tgtttcattaatctactaccttgtgtgaaccaggaggcaacttcaggcaagggggaactt
cttcattccttcctctgtgacgagctggtagaactccctcgcaggtattactcccagacc
tcccctagacaggcagctaccgagagcaatgtaagcaagcaggtctctggcatcccctct
gtcatctctctgaagaacctgaacaacaagcagcctggacatagaccttcatatgcagct
ggtttgctgttcagcttcaagcccggaagtaagagcagcagagatccaaagaaagcaagg
aagaataagactgccttgagccaagtttgtttggatgagctcaccttattgctcaatgag
gtccccgtttcatcaccagactggttttacatcatgcagctacccagtgcatgggcttca
ttcatgtctacggcattacaagctgtcattgagggaagacgttcagaggtagagcatgaa
gcatgtcgaggtagagatggtcctgatgaagaaaagcaaaaggaaggcttggcatcggct
tggctgtgggctcgggatagactgacagagcagctgaggacgactgtcttgaagaactct
ggtgcaaggggcaatgcgattctggccttgggtggcttggcacatgctgtgagtgcttac
gttgtacaactgggagaagaagctactttaagccagaggtcagcctcccagtacgaaggt
cataagtcatggattaccagggtcgtggactcttttcaagttgccatggattcaatacat
actgctcagtcagtgttcaaattctgccaacatcattctcgggaccactcccaggccacc
ggtgagcaggttcattcctgcgctgccctcgctcttccactgcttgccagtcacatcatg
accatgcctaccaatgccatctcccaagtgattgacaggatgatgtcattaagctccgcc
cagccctcatcagtgcccatacaccatggccttggtgtgggcatgctactggctaggctg
tgcgtagagcacttcacagacatgacaggaacagagggtgacaatgtcctttcccgatac
ttcgacaagctggagaacaccgtcttgactcagaataataacccacagggacatgtgatc
ggctgtacgctgggtttgggtgtcgccctctctggtctaacgcatgagagtactacccat
gcaaaggttcatgtgttgaaggtcagaggggatttactgagcaagattgaaagcctcgga
aactctgccagttgtctgaccgaggcacaagtgttgtgtgttgccttggttactgctgca
tgttatcaggtcaactacatcacctcccaggaggcgttgcacactgccaaaatgctacag
accatggcccagaataacctcaagtgtattccattagcagtgggtactggtctactgatg
cacagtcttacgaggataggtcatcaggaagtgatccctctctacaacaatcagcaagca
gagctcctcagacttctcactgacaaggatagcagcatagacctgataaagtcatcagta
gctggactagtagccctcttggtcgggccgggtcatctagtccagagtgaacgtagacca
ggacctgaacatcgaggtctcagctctgcagtcaagatgctatgtcagcttttgtcagac
acatccgacttgaggctacagcattcgttgccatggttacttggttatctatacatggga
tccaccgatgtgacagaggcaagatcgtcagttccatccaactacaacaacctggaggag
agcagcctgttgagggcagcagtcgacatgctgatagctgcaggaaggcttggtagcgag
gtggtcccttctcggcatgtactcactgtactgaaagtactacatgaatgctccgagagc
tgcaagaaggcgttaccaccagtcaattgggctgtggtcctcaaccctatcatgaggaac
aatagctatgcaaatggtgccatatactatgagtgtatgaagctggcagtaggacagtgt
gctgttgtgaggtcagcagcgttacagagcaatgcaagctttgtagcatcctggctctct
ccgtctgtctaccttaccatcaaggaaagttgtgagaaacatctcttccaatctctgcac
atccttgtgggctgtataccccttgaaatcctaaaagccttcctcagcggccaactggtc
ggcttgtttcagcattccaacacgcacttcacccattgtattacagcattacatggcctg
aatttagccgctcaggttccggacccagctcatggagttgtcaatttgctgaacgagact
gcacggaagatttttgcgagcttgccatttgacaaggagtacgattgcctgctccatgcc
cattttgctgaattcattaaatatctacctatggagttcttggaggaagtcactcagatg
aaggaccatctactgaaaccaagctttatacgtggatacttggtcaaacagggtttacaa
ccagtgcaatggttgaaagactgcgtagacgaggcgatgaatgttggcagcgagtctgac
cagtcagtcatcctgtggttcttgatgatagccctcggacagacgccctctcagctccct
gtccaggagagggagatgtggctccagcaactcatgaatcacttgaaaaccattgctttt
ggcagagagtcaacaccatctagcagtacacgagaacctcatcagagaatcaacttcctt
ctagaagtgtttgccatctccattgtgacctggtcttctcctgagttcacccacatctgt
ggtccccacccccatcactatgtctatggaacctcccagggaactggccaattagctgca
ggtattgaaggaggagaggaggaactgtcttccacagagtcttgtgagagcacccctgat
tggctgcagcaagtcaatgagaatagtccacttggatgtggggagtatgggaggcagact
gtgcagagggtgaaaggatttctacctggcgctctgtgtagactggttagcaaggccccc
tgggatggcatgagaggcaagatcatcgagtggttgatcaacatgagtatagacagcaag
aatgagctggttacagagccaatgagaagagagctgaaaggttgcctgtatgcattacgt
cactataatgaattcagagctaactcacagtggatgaagattttcgacaagtga
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integrated database retrieval system
