Strongylocentrotus purpuratus (purple sea urchin): 584375
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Entry
584375 CDS
T01019
Name
(RefSeq) vacuolar protein sorting-associated protein 13C
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spu04131
]
584375
Membrane trafficking [BR:
spu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
584375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_M
Motif
Other DBs
NCBI-GeneID:
584375
NCBI-ProteinID:
XP_030850035
UniProt:
A0A7M7PDC3
LinkDB
All DBs
Position
Unknown
AA seq
2018 aa
AA seq
DB search
MIFRAVIHSNQTVGSYRLIIEPVELRVDLSRPVDPNVAAVTPLRVTANLEIVQINIGEQD
IVTILATLSDNLMAPPRVVAEAMIEETMVTTEAEVHESLPGTSATPPVPTPTPPPKDTKP
RKTMFIQFVMDGAELEFYTNEQRLQRSGKGVSSRDPRNGLSRFRLHQVNGSASAYSTGAM
NVTASVLTITLEDIRPNSPLAIRQLLLKSSRKVRLRTSAAPGSPPSPKVTPMIEFTYTQD
ENQLQTFDFIIEGVRVNIFVHYLLAIYNFLSSALTQSKLESPLSPSGGQTSRQTSRTLSV
QGGPVGQSVSQSEGLNLRAATPAKPTSRSLQVKCQLRRPEVVLFDDPTSQNSQCLVLRSV
GKFAYKSSESGQQVVANLDKVQVFSCVYSQAMRTAYQVLEPCAVTFTRVTTPDQGDLMTA
DLTDVCLHVSPRVVYVVRGVSEALTSVTQKPASSRQLLEDYEHEDLWGPKPIFSHSFHKR
KGSMKNMVDFAPPTEPTTTPRQKLTVQLPRFEAFMELEESLDHVALLRLTCGFHASVIDW
SFNLRAEAEMHLGMTSFNEKLSVWEPIIEPVMAKEGDYRPWEVTAKLTRAESHPIKCYSM
CDRSPDGPRDSVDGGIQLVHTPGSYPVTETDSDSDTTSETELEWDGHYSSSFLSSDIASP
QDEDRNPPTESKSENEDDDEDEGGFFNKVENIFRDIFTSDSEEEEEAAGGGRSETDGGRR
MELALSAGVNTGQSDSGISSSARNSNSLAGSEPRDEMDSDTEVTDVETMANYIIVNSQDK
LQVTVTPVSLGIVKDLAEAFSTVPEPQLQIMRSIPEASTQIVNTTGLNARLLVPSSFIEN
AESVGISLVPINGGLVAPSRANHQPLTPEETHGVDAPDTASPDPEDPLETEGLDDLEEVV
RTSKYCKEKSHVSCISADETDSGAQDVNQNGVTLEVDGFRSLTNLIPAIAGTSLYPLSPS
NSQSDKIYGIVREVEISHGKERIKLRSPLQVANHCLVAVQLFYKKLDLQTLHGAIIPGLD
EEEFTSLGIIQPEEVMDIPVIVAYHAGIYACPVDQGYGVSEKPILWKDLQEPAEMSYLCP
PSKRGALPPFYFKVKRKDEKIPRPEGLEDAPCYTLNLYPPVTLHNYLPYDVVYTLEETGL
KFLLKGDKMAIYSTDLSEPQSMKIQVKQYLSANWEGHLPVSREMKTTESITMATKQVHSD
QRKYLTLWAHSSSEGGSWDIFLYSPYWFVNKSELPVEIRASRSRKIFSTHSLSDPVLFTF
SNSKRKKAKLRVFDSIWSSSFSLDTVGSSGVVICKDEDHDRTYQFWLDIRMSHLPFTKLV
TLTPYFLVHNKSDQELSYAEDGVKAGVWVNIKPSEVLPFWPGSESMKLILRRSTTPDNLS
SRPFLIDRPCTTVLRMERGTGITIQVEGGVQEPTTITFLAYTSGHSPVRLDNLCDDLNLR
INQKNNGSRHLVRPHRSLLYTWDDPTAERILMWNLYNRNKKSFECLVEQDGWGKVMVSLD
SVNRSTLPGDGLYVEGDDASVYSTDDEGVTESDGLLDHPLMNKKQRTTIYWVSYMDGLQR
VLVYTQSSRIARAAAQSNVSEPATLEFLASLQGIGVSLVNTAYEEVAYLSLFSSPARWEV
ESKANRWKALGMELTGVLENAWKHGQEVIVDDNGTIQADLRAQTIAKPVQGALKRIHNPG
LWIHFRKSDHHQGLHLKIQKIQIDNQLFDAYFPNVLHVNALPKDVLKKTGPRPFVEVSIL
RRQMPEYGADTIKYFKVLVQEASLKVDNGFILSVLDVFSHLQEEQDEVLSLRADLNYIQS
SLKETSNTISSSTANPIFFEFFHLSPLKFIVSLSLSGEPHITSDKPGSFQRDLGRVLLES
IGSTLTEVTEVELKLGYFERRNALLTTAQLTSEVQAHYISQGIKQAYVFILGLDVLGNPY
GLYRDVKEGISDLFYEPYLGLIQGPGEFAEGLAKGVQSLLGHTIGGVADAFGGVSGTLGK
ALSVLSFDEDYQKVSLKDTCRITDIVIMHPYINSLLVL
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgatattcagagctgtaatccactccaatcaaaccgtgggctcgtatcgtctcatcatt
gaacccgttgaactccgtgttgacctcagccgacctgttgaccccaacgtagctgctgtg
actccactcagggtcactgcaaatctggaaatagtgcagatcaatataggagaacaagac
attgtgacaatcttggcgacgctgagcgataacctgatggcgccccctagggttgtcgca
gaagcaatgattgaagaaaccatggttaccaccgaggcagaagttcatgaaagtcttcca
ggtaccagtgccactccaccggtccctacacccactcctcctcccaaggacaccaagcca
aggaagaccatgttcattcagtttgtgatggatggagctgagttggagttctataccaat
gaacaaagattgcaaaggagtggaaagggcgtatcttcccgtgacccgaggaacggtctg
tctcgcttcagactccatcaggtcaacggatcagcgtctgcctacagtactggagccatg
aacgtcacggcctccgtactaacaatcacccttgaagacattcgaccaaacagccctctt
gctatcagacagttactcctgaagagcagtaggaaggttcgtcttcgtacctctgctgct
ccagggagccctccatcccccaaggtgacccccatgatagagttcacatacactcaggat
gaaaaccagctacaaacctttgacttcatcatagaaggtgtgagagtgaacatctttgtg
cactatctactggccatctataacttcctcagtagtgcgttgacccagagcaagctagag
tcaccgctcagtcccagcggtggacagacatccagacagacatctaggacactgtcggtg
caaggaggtccagtcggtcagagcgtgagtcagtcagagggcttgaacctcagggctgcg
accccagctaaacccacctctaggtcactacaggtcaaatgccagctgcggaggccagag
gtggtgctgtttgatgacccaaccagtcagaatagccaatgtcttgtccttaggagtgtg
ggtaaatttgcctataagagcagtgaatctggacagcaggtagttgccaacttggataaa
gtacaggtcttttcttgcgtctactcccaagcaatgaggacagcttatcaggtgcttgaa
ccttgtgcggtgacctttacccgggtcacgacccctgaccagggtgacctgatgaccgct
gacctgactgatgtatgtcttcatgtatcaccgagagtcgtttatgtcgtcaggggggta
tccgaggcccttacatccgtcacacagaaacctgccagtagccgacagctccttgaagat
tatgagcatgaggatctatggggtcctaaaccaatcttctctcacagcttccataaaagg
aaagggagtatgaagaacatggtagactttgccccacctactgaacccaccaccacaccc
aggcagaagctgactgtccagctgcccaggtttgaggccttcatggagctagaggaatct
ctggaccatgtggccctgctgaggctgacctgtggtttccatgcttctgtcattgactgg
tccttcaatttgagagccgaggctgagatgcatcttggtatgacatccttcaatgagaag
ctttcagtgtgggagcccatcatcgaacctgtcatggcaaaagagggggattacagacca
tgggaagtcactgcaaagttgacgcgggcagagagtcacccgatcaagtgttacagcatg
tgtgatcggagccctgatggtccgagggacagtgtcgatggtggtatccagctggtccac
acccctggttcctacccggtgactgagacagactctgacagcgacacgaccagtgagaca
gagctggagtgggatggacattacagcagtagcttcctcagcagcgacattgcaagccct
caggacgaagacaggaacccaccgacggagagcaagtctgagaacgaagatgatgatgaa
gacgagggaggattcttcaacaaggtggagaatatcttcagggacatattcacgagtgat
tcggaggaagaggaggaggctgctggaggaggtagaagtgaaacggatggcggtaggaga
atggagttggctctatcagcaggagtgaatacagggcagtcagatagtggcatatcatca
tcggcaaggaactcaaactcactagctggctcggaaccaagagatgaaatggatagcgat
acagaggtcaccgatgtggagacgatggccaactacatcatcgtgaactcacaggacaaa
ctccaagtgacggtgacccctgtctcactggggatcgtgaaggaccttgctgaggctttc
agtacagtcccagaaccacagctacagataatgaggagtataccagaagcatccactcaa
atagtcaacacaacaggcttgaatgcaagactactagtgccttcatctttcattgagaat
gcagagtctgtgggtatcagccttgtacccatcaatgggggactggtggcacccagcagg
gccaaccaccagcccctcacaccagaggagacccacggggtcgacgcccctgatacagcc
tcgcccgatcccgaggatcccttagaaacagaggggcttgatgacttagaggaggtggtt
cggacttccaagtactgcaaggaaaagtcacatgtctcttgcatttcagcagacgagaca
gacagcggtgctcaggatgtcaatcaaaatggagtcacgctagaggtcgatggattccga
tccctgactaatctgattcctgctattgccggcacttctctttatcctctctctccttct
aactctcagtctgacaagatctatgggattgtacgtgaggttgagatcagccatggtaaa
gagagaatcaaactcagatcaccccttcaggtagccaaccactgcttggtagcagtgcag
ctgttctacaagaagcttgatctgcagaccctccatggggccatcataccagggttggat
gaagaagagttcaccagtcttggtatcatccagccggaggaggtgatggacataccggtc
atcgtggcctaccatgcgggcatctatgcatgtccagtagaccaggggtatggtgtgagt
gagaagcccatcctgtggaaggatctacaggaaccggccgagatgtcctacctctgccca
ccgagcaagagaggagcgcttccaccattctacttcaaggtgaagaggaaagacgagaag
atccctcgcccagaggggttagaagatgccccctgttacaccctcaatctctacccaccg
gtcacgttacataactacctcccctatgatgtcgtctacaccctagaagaaacaggtctg
aagttcttgttgaaaggagacaagatggcgatatactccacagatctgtctgaaccacaa
agcatgaaaattcaggtcaaacagtatctctctgcaaactgggaggggcatctcccggtc
tccagggagatgaagacaacagaatccatcaccatggcaaccaagcaggttcactctgac
cagcgcaagtacctgacgctgtgggcccacagctccagcgagggaggatcatgggatatc
ttcctctactcgccgtactggttcgtcaacaagtcagagctaccagttgaaataagggca
tctcgatcaaggaagatcttcagcacgcactccctaagtgatccagttctctttacgttc
tcaaactcaaagaggaaaaaggccaagttgagagtgtttgattccatctggtcatcttct
ttctccttggacacagtagggagctcaggggtcgtgatctgtaaggacgaagatcacgac
agaacgtatcagttttggctggacatccgtatgtctcacctacccttcaccaagctagtc
accctcacaccctacttcctcgtacataacaagtctgaccaggagctgtcctacgcggag
gatggggtcaaagctggggtgtgggtcaatattaaaccctcagaggtgcttccattctgg
cccggctctgagtccatgaagctcatactacggaggtcaacgacccctgataacctgagt
tcacgacctttcctgatagacagaccctgcaccaccgttcttagaatggagagagggact
ggtatcacaattcaagttgaaggaggtgttcaagagcctactactattacattcctagca
tatacctcaggacattcaccagtccggttagataacctgtgtgatgacctcaaccttaga
atcaatcaaaagaacaatggaagtcgtcacctagtgcggcctcaccgcagtctgctgtac
acatgggatgaccccactgcagagaggatcctgatgtggaacctctacaataggaataag
aagagctttgaatgcctagttgagcaggatggttggggtaaggtgatggtgagcttagat
agtgtaaatcgaagcacactgcctggtgatggactctatgtagagggagatgatgcaagt
gtctatagcactgatgatgagggcgtaacagaatccgatggcctcttagatcaccctttg
atgaacaagaaacagagaacaacaatctactgggtgtcttacatggatgggcttcagagg
gtcctggtctatacacagagctctaggatagctagagcagcagctcagtccaacgtctcc
gagccggccaccctggagttcctagcctctctccaaggcatcggcgtatcgttggtcaac
actgcctatgaggaggtggcctatctgagtctgttcagctccccagcccgctgggaggtg
gagtctaaggctaacaggtggaaggcactagggatggagctcacaggggttctagagaac
gcctggaaacacggacaggaggtcattgttgatgacaatggaacgatacaggctgatctg
agagcacaaaccatagccaagccagtacagggagctctaaagaggatccataacccaggg
ttgtggatccacttcaggaagtcagaccaccatcagggactgcatctcaagatacagaag
atacagattgacaaccaactgtttgatgcctacttccccaatgtactgcatgtcaatgcc
ttgcctaaggatgttctgaagaagactggtccccgaccatttgttgaggtgtcaattctc
agaagacagatgccagagtatggtgcagacactatcaagtacttcaaggtgctggtgcag
gaggctagcttaaaggtagacaatggtttcatcctgtctgtactagatgtcttctcacac
ctgcaggaggaacaggatgaggtgctgtcgttgcgtgcggatctgaactacatacagagt
tcactcaaggagacgtctaacaccatatcaagcagtacagctaacccaatcttctttgag
ttcttccatctgtctccactcaagttcattgtgagtctatcactcagcggtgagccacac
ataaccagtgataagcctggatccttccaacgtgatctagggcgtgtccttctagagagc
atcggctcaactctcacagaggtcacggaggtagagctcaaactgggttactttgagaga
aggaatgccctgttgacgacggcccaactaacatctgaggttcaggctcactacatctca
caggggatcaagcaagcctatgtgttcattctaggattggatgtgctagggaatccctat
gggttgtacagagatgtgaaggagggcatcagtgatctcttctatgaaccttatctgggt
ctaatccaaggaccaggggagtttgcggagggtctggccaagggtgtgcaaagtctactt
ggacatacaataggtggagtagcagatgcatttggaggtgtatccggcaccctgggcaag
gccctctctgttctctctttcgatgaggactaccagaaggtcagtctcaaagacacttgt
cgtattacagatatagttataatgcatccttatattaattcattactggttttgtga
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