Strongylocentrotus purpuratus (purple sea urchin): 584561
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Entry
584561 CDS
T01019
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
584561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
584561
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
584561
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
584561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
Lantibiotic_a
Motif
Other DBs
NCBI-GeneID:
584561
NCBI-ProteinID:
XP_030853610
UniProt:
A0A7M7PMV3
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MAIFITTPRKRHVCDEFTEPQRLVTPGATITADSDFMRGHGTYMEEDELIASVAGVVEKV
NKLISVRPLKTRYNGEVGDVIVGRIQEVGQKRWKVDVNSRLNAILMLSAVNLPGGELRKR
SAEDELKMRQYLTEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGIMVRVSPSLIKRRK
THFHNLTCGASVILGNNGYVWITRTPTEEEEAPDGGFVQNLQPVSDEDRRVLARLRNCIL
GLADHRMMLYDTSVIYTYAASEDYPVADLLNPDIMKDVILKVRQQLNQEAT
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattcatcacgaccccacgtaaaagacatgtttgtgatgaatttacagaacct
cagcgcttggtgacaccgggagcgacaatcacagctgattccgacttcatgagaggtcat
ggaacttacatggaagaagatgagctgatcgcatcagttgcaggagtagtggagaaagtc
aacaaactcattagtgtcaggccactcaaaacaagatataacggagaagtcggtgatgtc
attgttggaagaatacaagaagtcggacagaagagatggaaggtggatgtcaactctcgt
ctcaatgccattctgatgctatccgctgtcaaccttcctggaggggagctaaggaagaga
tcggctgaagatgagctcaagatgagacagtatctcactgagggagatctcatcagtgct
gaggtccagtcggtgttctctgacggtgctctctcactacacacaaggagtctcaagtat
ggaaagctggggcagggcatcatggtcagagtgtcgccctctctcatcaagcgacgaaaa
acccacttccacaacctgacgtgtggagcttccgtcatcttgggtaacaatgggtacgtg
tggatcaccagaacaccaacagaagaagaggaggcaccggatggagggtttgtccagaat
ctgcagcctgtctccgatgaggatcgtagggtgttggcaaggttacggaactgcatctta
ggtctagctgatcacaggatgatgctctatgataccagtgtcatctatacctatgctgcc
tcagaagactatccagttgctgatcttcttaaccctgatatcatgaaggatgtcatactg
aaggtgagacagcaactgaatcaagaagcaacgtaa
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