Strongylocentrotus purpuratus (purple sea urchin): 584729
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Entry
584729 CDS
T01019
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
584729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
584729
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
584729
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
SPATS2-like
Motif
Other DBs
NCBI-GeneID:
584729
NCBI-ProteinID:
XP_030830541
UniProt:
A0A7M7STL8
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MPTDTKRIQGPDASQSTFLYKKRANTVQPALLEEGKRQDGRSPLEIRPIFLKAGAVSQAK
GSCYMEMKNTKVICAVYGPREVPRRDGFVINGQLRCEFKFATFASEVRHGHLTSHTEKDL
ALQVQQALEPAVCLHKIPKSQVDIFITVLENDGSVLSAAITCASIAVANAGIEMYDLVIG
SSLRQTGETLLLDPTAFDETAESESTDDTQAIVTVGFLPSLKQVSCSVQQGQLQCEDSIK
ALQQCIDVCERYYQVVYECLKKSVKKLKSPVESPMDEAPAS
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggataccaaacgaattcaagggccagatgcgtcgcagagtacttttctgtat
aagaaaagggccaatacagttcaaccagcgctactagaggaaggaaagcgacaagatgga
agatcacctctagaaatcagaccaatatttctcaaagctggggcggtcagtcaggccaaa
ggatcgtgctacatggagatgaagaacaccaaggtcatctgcgctgtgtatgggccgcga
gaggtgccgcggagagacggctttgtcatcaatggtcagctcaggtgtgagttcaaattc
gccaccttcgccagtgaagtgaggcacggacacttgaccagtcacactgagaaggacctg
gcgttgcaggttcaacaagccctggaaccagcggtttgtttgcacaagataccaaagtcc
caagttgatatatttatcacagtacttgaaaacgatgggagtgttctgtcagcagccatt
acatgcgcatccattgccgttgcaaatgctgggatcgagatgtatgaccttgttattggc
agttcgttgagacaaaccggagaaacactgctgctagatccaacagcatttgatgaaact
gccgagtcagagtctacagatgatacacaagcaatcgtcactgtggggtttcttccttct
ctcaaacaagtctcgtgctcggtccaacaaggacagctccaatgtgaagactctatcaag
gctttacagcagtgtattgatgtgtgtgaacgttactaccaagttgtctacgagtgcttg
aagaaatcggtcaagaaattaaagtcaccagtggagtcccccatggacgaagctcctgca
tcatga
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