Strongylocentrotus purpuratus (purple sea urchin): 585199
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Entry
585199 CDS
T01019
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
585199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
585199
03009 Ribosome biogenesis [BR:
spu03009
]
585199
03036 Chromosome and associated proteins [BR:
spu03036
]
585199
Enzymes [BR:
spu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
585199
Messenger RNA biogenesis [BR:
spu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
585199
Ribosome biogenesis [BR:
spu03009
]
Eukaryotic type
90S particles
RNase
585199
Prokaryotic type
rRNA processing factors
585199
Chromosome and associated proteins [BR:
spu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
585199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-GeneID:
585199
NCBI-ProteinID:
XP_030854036
UniProt:
A0A7M7PRM0
LinkDB
All DBs
Position
Unknown
AA seq
1683 aa
AA seq
DB search
MHSQHPPPDQRPERPPYNPQLSLGPYSRPPPPGGPGPVSFGQNQVQRPRGPPLGPPLGPH
PGSQGPLFGHQGQYPPPSGVPPNWHGDRPPPGRGDIAFPHRPPPQLPPFTGPPPHLPFPN
GPPPGPRMQIPPPGGDFRMRPPPPFHTQRLPNAPHLPPPPLDFCNRPGNPGIPPTGFDHP
GDRQAGQGLQGPRDQCVPGASHQDHQFLQPDAVPSFRDRVSSQQASSSLDSPHEHHRGSQ
RPQDSSRHQGYGADEKGPRFRDLGEYQKTYTDSRSSDCDRKRPADDHNRRDREGFGKDAS
RDQLARDSRGSDSRDHSRRQRDRSRERTSRRERSRSPRQGRRGDRGRTREKSPSRENSSR
RDQSTGGSSSKERSRSPRRHESSSRERGSHRSSSPQRSKSRRAEGHDLQDSKRSRSPSRD
QRPRSPSRDQRPREREGSLQRHSSRKPEGQITDPSKTCQRWNDLERELREEELEENDEDK
DPLEDSDPEEWGTDDTPWIQCSPRENFYSINPSDQISASSVAGTEKLKELLKRFEAEIIE
RGPRVRAKQPQPEEKKPELHWHVHSHGHHSASESSDSESDSDTSSGEEDKDYDFRISCLE
NRANHPWRLAENLWFNQPGEMNDGPLCKCSIKQKKSGIRHNIFPGEKPVPICEQHTNNAS
KLHHYRVTISPTTNFLTTTQTVIVFDKREYIFEGFSLFSHHSLDEVPECKVVRFGREYTL
HFFPEPLPEHFTVKGLDLFARFLFEEILELWDFDFKGKENGCHHFHFMPRFARLLPNNGK
EILSMHHVIQYLIRSNKPIIDPAKLDDWLAVSETAWQRYVDKLQHMIATRPGKKPSSIRI
DQLDRDQMNPDKKTFPVVVHFGVRPAQLSYIGDPNYRKLLKSFTRLRHLLLNKPRVTEAD
KEKLAEKEAKLQRIRVQGSRVREVTAEVSSEHMLATGVGVDICQHALMLPVLVNHLRYFA
CLNSLYQVLGYKFQDPMLLRFAMTHPSYKLYFGTTPDHVRNSLYNCGIRCRQDHTEHKKV
LAKERKKGINQLYRIMSLMASNDELPSHIKNYERLEFLGDAVIEFISSTHLYHLFPDLEE
GGLATYRMALVQNQHLSVLAKKLELDKYMLYAHGPDLCRPYDLRHAMANCLEAVMGAIYL
EAGLDLCRKIFGKLLFEEEYLQTIWLNHPKDPLQADFPETDRHLIKNSEVLQKLTVFEGD
TGMRFTHIRLLARAFTQRTVGYTNLTMGSNQRLEFLGDSVLQLVVSSYLYKHFPNHHEGH
LSLLRSSLVNNKTQSIIAQDLGLVEYIIEPKTRSRNENNIPMKIMADLVEALIGAMYVDH
GLEVVSTFCSVVFYPRLKDFIQTQHWNDAKSQLQQCCLTLRVEGQEPDVPNYKVIGQSGP
TNSRQYSVAVYFKSKRMSTGTASNIRDAEMEAAKNALRKGNFPHLWFQRKCVMLRKQREA
MREEEKMKEDEERRGKGEEKEGENGVKRGGSDSRGRRDDGRMDSSRGEGRRDERRRDEGR
RDDGRRDDGRRDDGRRDDRRREDRRDERRKEEGRRDDKRREERSRDEGRMGERRDERRNE
RRDDERRDEKSRDERKRDERRRDDRKDGEDRLRRERDRTLSSRDVKNRDEERSRNDQEKK
EDVRKEGGLPNEPTGRRRDEISQERRKEGDKSKREEGNNPRRESQTNTTLNEGVRNEERK
DCR
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgcactcccagcatcccccaccagatcaacgacctgagaggcccccctacaaccctcag
ctctccttaggaccttactcaaggcctccccctccaggaggaccaggtcctgtgagcttt
ggtcagaatcaggtccagagacccagaggaccacctttaggaccacccttaggacctcat
ccgggatcccaaggacctttgtttggacatcaaggacagtatcctcctccatctggagtg
cctccaaattggcatggagaccgacctccaccaggcagaggagacatagctttccctcat
aggcctccacctcagttaccaccctttacagggccaccaccccatttgcccttcccgaat
ggcccacctcctgggcctaggatgcaaattccaccccctggaggggattttagaatgaga
ccaccacccccatttcacacccagagactccctaatgcaccccacttgccaccacctcca
ttggacttctgcaatcgtccaggaaacccagggataccgccaacaggattcgatcatcca
ggggatcgacaggcgggccaaggtcttcaagggccaagagaccagtgtgttccgggtgct
tctcatcaagaccaccaatttctgcaaccggatgccgttccgtcattcagagacagagtc
tcaagtcagcaagcctcatcctccctggattctccacatgaacatcacaggggatcacaa
agaccacaggactcctcaaggcatcaggggtatggtgcagatgaaaaaggtccaagattt
agagatcttggggaataccaaaagacatacacagactctagatcttcagactgtgataga
aaaaggcctgcagatgatcataatcgaagagacagagaagggtttggaaaggacgcatct
agagatcagttagctagagacagcagaggttcagattccagagatcattctcgtcggcaa
agagacaggtccagggaaagaacatcgaggagagagaggtcacgatctcccagacaaggt
cgtcgtggagacagaggcagaacgagggagaaaagtccgtccagagagaatagctcaagg
agagaccaatcaacaggtggttctagcagcaaagaaagatccagatcacctagaaggcat
gagagttcctcaagggaaagaggttcacacaggagcagcagccctcagaggtctaaatca
aggagggccgaaggtcatgacctgcaggatagcaaaagatctcgaagcccttctagggat
caaagacctcgaagcccttctagggatcaaagacccagggagagagagggatcattgcaa
aggcatagcagtaggaaacctgaagggcaaatcacagatcccagcaaaacctgccagcga
tggaatgatctggagagagaactgcgagaggaagaacttgaggagaatgatgaggataag
gatccccttgaagattctgaccctgaggagtggggtacagatgacaccccttggatccaa
tgctccccaagagagaacttctactctattaatcccagtgatcaaattagtgctagttct
gtagctggtactgagaaactgaaggaactcttgaaacggtttgaggcagaaatcattgag
cgaggacctcgtgtcagagccaaacagccacagccagaggagaagaaaccagaactccat
tggcacgtccattctcatggccaccactcagcaagcgagagtagcgatagtgaatctgat
tcggacacctcgtctggcgaggaggacaaagattatgatttccgcatctcatgtctggag
aacagagctaatcatccatggcggctggctgagaatctatggttcaatcaaccaggagag
atgaatgatggtcctctgtgcaaatgtagcatcaaacagaaaaagtcaggcatcaggcat
aacatcttcccaggagagaaacctgttccaatctgtgagcaacataccaacaatgcatcc
aaactacatcactacagagtcaccatctcccctactacaaacttccttaccacgactcag
acggtcattgtctttgacaaacgagaatacatctttgaaggattctctctcttctcgcat
cactctttggatgaagtacccgaatgtaaggtggtccgctttggccgggagtacaccctt
cacttcttcccagagcctctgcctgagcactttacggtgaaaggcttggatttatttgca
aggttcttgtttgaggaaatcctggaactttgggattttgattttaaaggaaaagagaat
ggatgccatcacttccatttcatgcctcgctttgcccgcctccttcccaacaacggcaag
gagatcctctccatgcaccacgtgatccagtacctgatccgcagtaacaagcccatcata
gatccggccaagctggacgactggctggcggtcagcgagaccgcttggcagagatatgtg
gataagcttcagcatatgattgccacacgcccagggaagaaaccgtcatcgatacgcatt
gatcagcttgaccgagatcagatgaatccagataagaagacctttcctgtcgtcgttcat
tttggtgtccgtcctgcccaactctcttacattggagaccctaactatcgtaagctgctc
aagtccttcacccgtttgcgtcacctcctgctgaacaagcccagagtgactgaagctgat
aaggagaagctggctgagaaagaggccaaactgcagagaatccgcgtccagggaagcagg
gtgcgggaggtcaccgcggaggtcagcagtgaacacatgctagccactggtgtaggagtt
gatatatgtcagcatgccctgatgcttccagttcttgtcaatcatctacgctactttgcc
tgtctcaacagcctctatcaggtcctgggctataagttccaggatcccatgttgctaagg
tttgcaatgacacatccgtcttacaagctgtactttgggaccacacccgaccacgtgcgg
aactctctttacaactgtggaatccgctgtagacaggatcatacagaacacaagaaggtg
cttgccaaggaaagaaagaaaggaattaatcagctgtatcgcattatgtccctgatggct
tccaatgatgaactaccatcccacatcaagaattacgagcgtcttgagttcctaggggat
gctgtgattgagttcatatccagcacccacctctatcacctcttcccagaccttgaagaa
ggtggtctagccacctaccgtatggctctggtccagaaccaacatctctcagtcctagca
aagaaacttgagctggacaagtacatgctctatgcacacgggcctgacctctgccgacct
tacgaccttcgacacgccatggccaactgcttggaggcagtcatgggagcaatatatctg
gaggcggggctggatctatgtcggaaaatctttggcaaactgctctttgaggaagaatat
cttcaaactatctggcttaatcatcctaaggaccctctgcaggctgattttcctgaaaca
gacaggcacttgatcaagaattcagaagtgctgcagaaactgacagtatttgaaggggac
acagggatgcgcttcacgcacattcgacttctcgccagagcgttcacccagaggactgtg
ggatataccaatttgaccatgggttccaaccagagacttgagttccttggagattccgtg
ctacagcttgttgtctcctcatacctctacaagcatttccccaatcatcatgaaggacac
ttatcgctcttgaggagttctctggtcaacaacaagacccagtccatcatagcccaggac
ctgggactcgttgagtacatcatagagcccaagaccaggtccaggaatgagaacaacatt
cctatgaagatcatggctgatcttgtagaagccctgattggtgctatgtatgtggaccat
ggactagaagttgtttctacattttgcagtgttgtcttctatcccagactgaaggacttc
atccagacacagcactggaacgatgctaagtcccagctccagcagtgctgcctgactcta
cgggtggaaggtcaagaaccggacgttccaaactataaggtcatcggccagagcgggcca
acaaattctcgccagtactctgtggctgtatacttcaaatccaagcgaatgtcgacaggg
acggcctcaaatatccgggatgctgagatggaggcagcgaagaacgccttgaggaagggg
aacttcccgcatctctggttccagcggaagtgtgtgatgttgcggaagcagagggaggcc
atgagagaggaggagaagatgaaggaagatgaggaaagaaggggcaagggagaggagaaa
gaaggagagaatggagtgaagagagggggtagtgattcgaggggcaggagggacgatgga
aggatggattcctcaagaggtgaaggaaggagagatgaaaggaggagggatgaaggaaga
agagatgatggaaggagagatgatggaagaagagatgatggaagaagagatgacaggaga
agggaagataggagagatgaaagaaggaaagaggagggaaggagagatgacaaaagaaga
gaagaaagaagtagagatgaaggtaggatgggggaaagaagagatgaaagaagaaatgaa
agaagagatgatgaaaggagagatgaaaaaagtagagatgaaagaaagagagatgaaagg
agaagagatgacagaaaagatggggaagatagactcaggcgcgagagagaccgcactctc
tcttcaagagatgtcaaaaacagagatgaagagaggagtagaaatgatcaggaaaagaaa
gaagatgtaaggaaggagggaggacttccaaatgaaccaacaggcagaaggagagatgag
attagtcaagagagaagaaaagagggagacaagtctaaaagagaagagggtaacaatcca
agaagagaaagtcaaacgaatacaaccttgaatgaaggagtaagaaatgaagaaagaaaa
gattgtagatga
DBGET
integrated database retrieval system
