Strongylocentrotus purpuratus (purple sea urchin): 585968
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Entry
585968 CDS
T01019
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spu03009
]
585968
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
585968
Ribosome biogenesis [BR:
spu03009
]
Eukaryotic type
Pre-60S particles
Helicases
585968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
FlgM
Motif
Other DBs
NCBI-GeneID:
585968
NCBI-ProteinID:
XP_030841987
UniProt:
A0A7M7NUL7
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MAASKSEINGATFRGMGLDDRVLKALAKLGWSSPTLIQEKAIPLALEGKDILARARTGSG
KTAAYAIPLVQKILTLKETAREQATRALILVPSRELCSQAFKNIQEISKCCSKEIKCADV
SGQVDLSAQRPLLMERPDIVLGTPSRILAHIQAKNLSLQNSLEMLVIDEADLVFSFGHEA
DMRALLSHFPKIYQAILMSATLSEDVKTLKKLVLHNPITLKLAESQLPEADRLSQYQVRC
IEEDKYLLIYTLLKLKLIRGKTIIFVNSIDRCYRLKLYLEQFSVPVCLLNSELPVNSRCH
IVNQFNTGLYDIIVASEESSLFDGGKRDEAEERKEKKGKGQKVKQKKDKEYGVSRGIDFQ
NVSNVINFDFPESVKSYIHRVGRTARGEKMGTALSFVNEQEQDLLDNVEQELIGDDGTPL
IKPYQFKMSEIEGFRYRAKDAMRAVTKVAVREARVKEIKQEIFNSKKLKAYFEDNPRDLQ
LLRHDKILHPAKVHSDLKNVPEYLVPKALRGTIPTTSRRKAPKRAAADGKGVQKRESRVA
KMKRKTEEDPLQSFKYKGKN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccaagagtgaaattaatggggctacatttcgcggtatgggtctggatgat
cgtgtcttgaaggcccttgcgaagctgggctggtctagtccaactctgatccaggaaaag
gcgataccactggccctggaaggaaaggatatactagcccgggctaggactggatctggc
aagacagcagcctatgctatccctctcgtccaaaagatcctaactttaaaagagacagct
agagagcaggctacacgggctctgatcttagtgccatccagagaactctgttcacaggcg
ttcaagaacatacaggaaatcagcaaatgttgctctaaagaaatcaaatgtgctgatgta
tctggccaggtggacttgtcagctcaaaggcctctactgatggaaagaccggacatagtt
cttggcactcctagtcggatcctggcccacatccaggccaagaacctgtccctgcagaac
tccctggagatgctggtcatcgacgaagcggacctggtcttctccttcggccacgaggcg
gatatgagggcactcctctctcacttcccgaagatctatcaagccattcttatgtctgct
acgctgagtgaagatgtgaagacactcaagaagctggtgttgcacaatcctatcacactc
aaactcgcagaatcacagcttccagaggcagaccgcctaagccagtaccaagtaagatgt
attgaagaggacaaatatctactcatctacacactactgaagctcaagctgatcagaggc
aaaaccatcatctttgtaaactcaatagacaggtgttacagactgaagctgtacctagag
cagttttctgtgccagtctgtctgctgaactcagagctcccggtgaactctagatgccac
atagtaaaccagttcaacaccggtctgtatgacatcatcgtcgcatcggaggagtctagt
ctctttgatggaggcaagagagacgaagcggaggagaggaaggagaagaagggcaaaggc
caaaaagtaaagcagaagaaagacaaggaatatggagtatcaagagggatagatttccag
aatgtttccaacgtgatcaactttgatttcccagagagtgtcaagtcctacatccacaga
gtgggaaggactgcaaggggagaaaagatgggaacagccctgtcctttgtgaatgagcag
gagcaagatcttctagacaacgtagaacaggaacttatcggagatgatggaacaccttta
atcaagccttatcagttcaagatgtcagagattgaaggattcaggtatcgagccaaggat
gcaatgcgagcggtaacgaaggtggcagtgcgtgaagccagggtgaaggagatcaagcag
gagatcttcaactccaagaaactcaaggcctactttgaagacaacccaagggacctacag
ctcctcagacacgacaagatcctacatcctgcgaaggtccactctgacctcaagaatgta
ccagaataccttgtccccaaggctttgagaggaaccattcccaccacaagcagacggaaa
gctcccaagagggctgcggctgatggcaagggtgtacagaagagagagtccagggtagcc
aaaatgaagaggaaaactgaagaagatcccctgcagagcttcaaatacaagggaaagaat
tga
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