Strongylocentrotus purpuratus (purple sea urchin): 586956
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Entry
586956 CDS
T01019
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase isoform X1
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
586956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
586956
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
586956
Spliceosome [BR:
spu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
586956
Complex C
U5 SnRNP specific factors
586956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
PhoH
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
586956
NCBI-ProteinID:
XP_030842191
UniProt:
A0A7M7NV54
LinkDB
All DBs
Position
Unknown
AA seq
2147 aa
AA seq
DB search
MADATARSLQYEYKANSNLVLQVDRSLVERRNRDEATGEVMSLVGKLGYSKMGDRAQRTR
PPQQKEKEAKRKKRDEARYDMKKFKGQTLLSAGVEDIVGIYYRPKTQETRGTYEALLSFI
QAAIGDQPRDILCGAADEVLATLKNEHSKNKDKKKELEQLLGTLAEERFALLVNLGKKIT
DYGAEKEKKNIDDDIDETLGVNVQFEESDDDGGDDEDVGEIKEEESDEEEGMEDSGVGST
LKTSLGGGDDVLMAAKKGLHPRDIDAFWLQRQLGKFYDDPNISQARSAEILDILKNASDD
GQCENQLVMLLGTTQFEFIKLLRQNRMMILCCTMLAKSQTVAEKQQLEDQMKQDPDLVAI
LQALTETDKEDLIKEERARKAAARQSRVDADLDAMEVDDDDNNMLPEKLVDLEDIVFAQG
SHLMANKRCQLPDGSYRKQRKGYEEVHVPALKPKPYEDDESLVPIDRLPKYAQPAFEGFK
SLNRIQSRLYKAALESDENLLLCAPTGAGKTNVALLTILREIGKNINLDGTINTSAFKII
YIAPMRSLVQEMVGNFRKRLDSYGITVSELTGDHQLTKDQITATQIIVCTPEKWDIITRK
GGEKTYTQLVRLIIIDEIHLLHDDRGPVLEAVISRTIRNIETSQEDVRLVGLSATLPNYQ
DVAGFMRVKPDKGLFFFDNSFRPVPLEQQYIGITEKKALKRFQLMNEIVYEKVMDNAGKN
QVLVFVHSRKETGKTARAIRDLCLEQDTLGQFLREGSASTEILRSEAEHAENLELKDLLP
YGFAMHHAGMTRLDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG
RWVELGPLDVLQMLGRAGRPQYDTKGEGILITSHSELQYYLSLQNQQLPVESQFISKLAD
NLNAEVVLGNIQTMKDAVTWLGYTYLYIRMMRNPTLYGIPGDSKDTDPDLDQFRIDLIHA
AAIALDKNNLVKYDRKSGNLQVTELGRIASHYYCTNDSMSTYNSLLKPTLSEIDLFRVFS
LSSEFRHMVVREEEKMELTKLLERVPIPIKESIEEPSAKVNVLLQAYISQLKLDGFALVA
DMVFITQSAGRLVRAIFEIVLHHGWAQLADKTLSLAKMIDKRMWQSMSPLRQFRKIPEEV
VRKIEKKNFPWERFFDLGPNELGEFIRMPKMGKTIHRYIHHFPRLELATHIQPITRSTLR
VELTIRPDFQWDEKIHGNSEAFWILVEDVDSEIILHHEYFLLKSKFAQDEHIVKFSVPVF
EPLPPQYFIRVVSDRWIVSETQLPVSFRHLILPEKNLPPTELLDLQALPVSALRNPAFES
LYSTKFSVFNPIQTQVFNAVYNGDDNIFVGAPTGSGKTIIAELAILRMLLQSSECRCVYV
TPLEALAEQMYNEWHLKFQMQLGKKVVLLTGETSTDLKLLAKGNVIISTPDRWDVLSRRW
KQRKNVQNVNLFIIDELHLIGGDNGPVLEVICSRMRYISSQIERNIRLVALSSSLANAKD
IAQWLGASPTNTFNFHPNVRPVPLELHIQGFNITHTGSRLIAMVKPTYNAIIKHSPTKPV
IVFVPSRKQTKLTAIDLLTYVTAEDGAESRFLHVDKDDLAAHLSKVDDETLREMLSNGIA
YLHEGLSEIEQKVVEQLYMSGAVQVVVASRMMCWGMTLNAHLVVVMDTQYYNGKIHAYVD
YPITDVLQMTGRANRPEIEHEVSKCVVLCQGSKKDFYKKFMYEPLPVESHLDHCLHDHFN
AEVVTKTIENKQDAVDYLTWTFIYRRMTQNPNYYNLQGMTHRHLSDHLSELVENTLQDLE
HSKCISIEDEMDISPLNLGMIAAYYYINYTTIELFSMSLNNKTKIKGLIEIISSAAEYEN
IPIRHHEDSMLKQLSSRTPNKVSNPRYNDPHLKTNLLIQAHLGRMQLSAELQSDTEDILN
KALRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWNKDSYLKQLPHFGQELVKKCTEK
SIESIFDVMEMEDEERHELLQMTDAQMADVARFCNRYPNIELMYDVQEKDGLESGSPVVI
MVSLEREDEITGPVVAPLFPQKREEGWWVVIGDTKTNSLISIKRLTLQHKAKVKLDFVAP
SPGSHHYTIYFMSDAYMGCDQEYQFDIDVKEPGSDASGDSDDSSDEE
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgctacggctaggtcattgcagtatgagtacaaagcaaactccaatcttgta
cttcaagtcgatcgctcgctggtcgagcgaagaaatcgtgatgaggcgaccggtgaagtg
atgagcttggtgggcaagctgggctatagtaagatgggagacagagctcagagaaccaga
ccccctcagcagaaagagaaagaggcaaagagaaagaaacgagatgaagctcggtatgac
atgaagaagttcaaaggtcaaacactgctatctgctggtgtagaagacattgttggaatc
tactacagaccaaagacacaagaaaccagaggaacctatgaggcattgcttagcttcatt
caagctgctattggagatcagcctcgtgacatcctgtgtggcgctgcagatgaagtgcta
gctactctgaagaatgaacacagtaagaacaaagacaagaagaaagagctggagcagctg
cttggaaccctggctgaagagaggtttgctctgctggtcaacctgggcaagaagatcaca
gattatggagctgagaaggagaagaagaatatcgatgatgacattgatgaaacccttggt
gtgaacgtccagtttgaggaatcggatgatgacggaggagacgatgaagatgttggtgag
atcaaagaggaggagtctgatgaagaggaagggatggaagattctggtgtaggatccacg
ctcaagactagtcttggaggtggcgatgatgtgctcatggctgctaagaagggacttcac
cctcgtgacattgatgcgttctggcttcagaggcagctggggaaattctacgatgatcct
aacatctcacaggcgaggtcggcagaaatcttagacatcctcaagaatgcatctgatgac
ggacagtgtgagaatcagcttgttatgcttcttggtaccactcagtttgagttcatcaaa
ctcctcagacagaacagaatgatgatcctatgctgcaccatgctggccaaatcacagact
gttgcagagaagcagcagcttgaggatcagatgaagcaggaccctgatctagtagccata
ctccaagccctcactgagacggacaaagaggatctgatcaaggaagagagagccaggaag
gccgctgccaggcagagtagggtcgatgctgacctggatgcaatggaagtagacgatgat
gataataacatgcttccagaaaagctggttgacttggaggatatagtctttgctcaaggc
agtcatctgatggctaataagagatgtcagctccctgatggatcctaccgtaaacagagg
aaaggatacgaggaggttcatgtaccagccctcaaaccaaagccatatgaagatgatgag
tccttggtgcccattgaccgcctgcccaagtacgcccagccagcgtttgagggattcaag
agtctgaatcgaatccagagtagattgtacaaagctgccttagagagtgatgaaaacctg
ctactctgtgcccctacaggtgctggtaagaccaatgttgcattgctgaccatcttgaga
gagattggtaagaacatcaacctggatggaaccatcaacacctcagccttcaagatcatc
tacatcgcccctatgaggtctctcgtacaggagatggtgggcaacttcaggaagaggctg
gattcgtacggaatcactgtatccgagttgaccggtgaccatcagctgaccaaagatcag
atcacagcaacccagatcattgtctgtactccagagaagtgggatatcatcacgaggaaa
ggaggagagaagacctacactcagcttgtcaggctcattatcatcgatgagattcatctc
ctccatgacgaccgtggcccagtcttagaagcagtgatttcaaggacaatccgtaacatc
gagacatcccaggaagacgttcgtctggtcggcctgagcgccaccctacccaactaccag
gatgtggctggattcatgagggtcaagccagacaagggactcttcttctttgataacagc
ttccgtcccgttcccctggagcagcagtacatcggtatcacggagaagaaagctctcaag
agattccagctcatgaatgagattgtctatgagaaagtgatggacaacgctggcaaaaac
caggtgcttgtgtttgtgcattcccgtaaagagacgggcaagacggctagagccatcaga
gacctgtgtctagagcaggacacgctaggtcagttcttgagagaagggtcagcctctacg
gagatcttgaggtcagaagcggaacatgcagagaatctggagctgaaggacttgcttccc
tatggctttgccatgcatcacgcaggaatgaccaggctggacaggaccttggtagaagat
ctgtttgctgatcgtcacatccaggtcttggtttccacggcaaccctagcttggggtgtc
aatcttcctgctcatactgtcatcattaaaggaactcagatctacaaccctgagaagggt
cgatgggtagagcttggacctctagacgttctgcagatgttgggacgtgcagggcgccct
cagtatgatacgaagggagagggtattctcatcaccagccacagtgagcttcaatactat
ctctcactacagaatcaacagctgcccgttgagagtcaattcatcagtaagctagctgat
aacctgaacgctgaggtggtcctaggtaacatccaaaccatgaaggatgctgtaacctgg
ctaggttacacctacctctacatccgtatgatgcgtaaccccacgctgtacgggatccct
ggggactctaaggatacggacccggacctggaccagttcaggatagacctgatccatgct
gcggccatcgccctggataagaacaacctagtgaagtatgatcgcaagtcaggcaacctg
caggtgactgagcttggacggattgccagccactactactgcaccaacgactccatgtcg
acctacaacagtctcctgaaacccaccctgagtgagattgatctcttccgtgtcttctct
ctctcatcagagttcagacacatggtagtcagggaggaagagaagatggagctgacgaag
ctactggagagagttcctatacctatcaaagaaagcattgaggaaccaagtgcaaaggtg
aatgtgttgctccaggcatacatctctcaactgaaactggacggctttgctttggtagcc
gacatggtcttcatcacacagtctgcaggacgtcttgtaagggccatctttgagatcgtc
cttcatcatggctgggctcagctagcagacaagactctctcattggctaagatgatcgac
aagagaatgtggcagtcgatgagccccctccgtcaatttcgcaagatccccgaggaggtc
gtgaggaagatagagaagaagaacttcccttgggagaggttctttgatctcggacccaat
gagcttggagagttcatccgcatgcccaagatgggcaagaccatccacagatacatccat
cacttccctcggttggagctagccactcacatccagcccatcaccaggagtacattgaga
gtagagcttaccatcagaccagacttccaatgggatgagaagatacatggaaactcagag
gccttctggattcttgtagaggatgtagacagtgagatcattctacatcatgagtacttt
ctactcaaaagcaagtttgcccaagatgagcacattgtcaagttctctgttcctgtgttt
gagcctctccctcctcagtacttcatcagggtggtttcagacaggtggattgtatctgaa
acacagctgccagtgtccttccgtcacctgatcctccctgagaagaacctaccccctaca
gagctcctagatcttcaagccttaccagtctcagctctgaggaaccctgcctttgagtct
ctctacagcaccaagttctctgtcttcaatcccatacagactcaagtgttcaacgctgtg
tacaatggagatgacaacatctttgttggcgcccccactggcagcgggaagacaatcatc
gccgagctggccatcctacgtatgttgcttcaatcctcagaatgtaggtgtgtctacgtc
acaccgctagaggctctagctgaacagatgtacaacgagtggcatctgaagttccagatg
cagcttggtaagaaggtggtcctcctgaccggtgagactagtactgacctcaagctctta
gctaagggtaatgtcatcatcagtacaccagaccgatgggatgtgttgtcacgacgatgg
aagcagcgtaagaacgttcagaatgtcaacctcttcatcattgatgagctgcacttgatt
ggtggtgacaatgggcctgttcttgaggtgatctgctccaggatgcgttacatctcgtct
cagatcgagcgtaacatccgtttggtagccctgagctcctccctggccaacgctaaggat
atcgctcagtggcttggagctagtcctaccaacaccttcaacttccatcccaatgtgaga
ccagttcctctcgagctgcacatccagggctttaacatcacccacacgggatcgcgtctc
atcgccatggtgaagcccacctacaacgccatcatcaagcactcccctaccaagcccgtc
attgtgtttgtaccgtctcgcaagcagaccaagctgaccgccattgatctcttgacctac
gtgacggccgaggatggagcagagagtcgtttcctccatgttgataaggatgatctggct
gcccatctcagcaaggtggatgatgagaccctgagggagatgctgagtaacggtatcgct
tacctgcacgagggcctctcagagatagagcagaaggtggtagagcagctctacatgtct
ggagcagtacaggtggtggtagcatccaggatgatgtgctggggcatgactctcaatgct
catctcgtcgttgtcatggatacacagtactacaatggcaagatccatgcgtatgttgac
taccctatcactgatgtgcttcagatgacaggaagggctaacagaccagagatagaacat
gaagtgagcaagtgtgtggtgctgtgtcaaggttccaagaaggatttctacaagaagttc
atgtacgaacccctcccagttgagtctcatcttgatcactgtctccatgatcacttcaat
gctgaggtcgttaccaagacgatagagaacaaacaggatgcagtagattacctgacatgg
accttcatctacaggcgcatgacacagaatcctaactactacaatctacaaggtatgacc
catcgtcatctttcggaccatctctcggagctggtggagaacaccctgcaggaccttgag
cattctaagtgtatcagcattgaggatgagatggacatcagtccactgaatctgggtatg
atcgctgcgtactactacatcaactacacgaccatcgagctcttcagtatgtcactcaat
aacaagaccaagatcaagggtctgattgagattatctcgtccgcagcagagtatgagaat
attcctatcagacatcatgaggactccatgctcaaacagttgtcaagtcgtacacccaac
aaggtgagcaacccacgttacaacgatcctcatctgaagaccaaccttctcatccaagcc
catctcggtaggatgcagctatcagctgagcttcagtcagatacagaagacatcctcaac
aaggctctgcgtttgatccaagcatgtgttgatgtgctgagtagcaacggttggctgtct
ccagccttagcagccatggagcttgctcagatggtcacacaagctatgtggaacaaagat
tcttatcttaaacagctgcctcactttggacaagaactcgtcaagaagtgcacagagaag
tccatcgagagtatctttgacgttatggagatggaggatgaggagagacatgagctcctc
cagatgaccgacgcccagatggctgatgtggctagattctgcaaccgctatcccaacatt
gaactgatgtatgacgtgcaggagaaggacggcttggagagtggctcacctgtggttatc
atggtctcgttggagagagaagatgagatcactggacctgttgtagctcctctcttcccc
cagaaacgagaagagggttggtgggtggtcatcggtgacaccaagacgaacagtctcatc
tccatcaagcgtttgacccttcaacacaaggccaaggtcaagctggactttgtagctcca
tcccccggcagtcatcactataccatctacttcatgagtgatgcttacatgggatgcgat
caggagtaccagttcgacatcgatgtcaaggagccgggaagcgacgccagtggagacagc
gatgatagttcggatgaggagtag
DBGET
integrated database retrieval system
