Strongylocentrotus purpuratus (purple sea urchin): 587426
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Entry
587426 CDS
T01019
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
587426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
587426
03012 Translation factors [BR:
spu03012
]
587426
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
587426
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
587426
Translation factors [BR:
spu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
587426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
587426
NCBI-ProteinID:
XP_030852268
UniProt:
A0A7M7PKU3
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MEKEQQDRKKFNEYLEAMRETYSEQVVDTLSSMDHNVLDLDLTAELLRYISLQKPEGAIL
VFLQGWDQISKLHDKLTSQTLFSEERFIIIPLHSMMPTINQRHVFEHPPPGVRKIIIATN
IAETSITIDDVVYVVNLGRVKETNFDVANNIRTMKAEWVSKASAHQRRGRAGRVQDGECF
HVYSQLKASEMVEYQLPEIKRTPLEELCLNIKTLKLGSVHPFISKAMETPDIRAIQLAIS
SLKQMRAFDDNEDLTALGYHLSRLPVEPRIGKMMLFGAMFCCLDPILTIAASLSWKDPFY
IPLGKERLADERRRVLSNNTRSDHLMLANAMSGWEDAKEHRGEGSYCWQNFMSSNILSML
SKMKGQFCDVLHRLRFVSNRSPKHIDANRNSENEQLVKAVLCAGLYPKVAHVDKVPFNRK
TGQNRPPRLSTPEDGRVQIHPKSVNANETTFSSKWLLYHLKLKSTSVFLHDTTMVEPYPL
IFCGGKISWDDDQGHETVFVDDHIKFHCSQETAHLVIKLREELDRVMEQKITNPGPTNWS
PASHEGRVMRAIIDILVMQSRDTYDNDDQGFVHSARGNNRHGGNDDDDDDDCYDDEAGEA
GGGRQYGRSGNRYNNDDRPGSSHWRPDSHRRRIQGNPQQGFWTQK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaacagcaggaccgcaagaagtttaatgaataccttgaagcgatgagggag
acgtattcagagcaagtggtggataccctgtcatccatggatcacaatgtcttagatcta
gatctcacagctgaactactgcgctacatctcactgcaaaaaccggagggtgccatcctt
gtctttctacaggggtgggatcagatcagtaagctacatgacaaactcacctcccagacg
ctcttctcagaagaaaggttcatcatcattcctctacactctatgatgcctaccatcaac
cagagacacgtatttgaacatccacctcccggagtacggaagatcatcatagcaaccaac
attgcagagactagcatcaccatagatgatgtggtctatgtggtcaacctgggacgagtc
aaagaaaccaactttgatgtggccaacaacattcggacgatgaaggctgaatgggtcagc
aaggcgtcggctcatcagaggagggggcgagctgggagggtgcaggatggagaatgcttc
catgtgtacagccagctaaaggcttctgaaatggtggaataccaacttccagaaatcaag
agaactccccttgaagaactctgtctcaacataaagaccttgaagctaggcagtgtgcat
cccttcatcagcaaagctatggaaacccctgacataagggcaattcagctagccatcagc
agtctcaaacaaatgagagcctttgatgataacgaggacctgacagctttgggataccat
ctatctcgtcttccggtggagcctcgtattggtaagatgatgctgtttggtgccatgttc
tgctgtctggatcctatactcacgatagcagcttccctcagctggaaggatccattctac
atccctctcggtaaggagagactcgctgatgagaggcgtagggtgctgtccaacaacact
cgcagtgatcacctgatgttagctaatgctatgagtggctgggaggatgctaaggaacac
agaggagagggatcctactgctggcaaaacttcatgtcttcaaacatcctcagtatgctg
agcaagatgaagggtcaattctgtgacgtcctgcatcgcttgaggtttgtctccaacaga
tcacccaaacacattgatgcaaatagaaattcagagaatgagcagcttgtgaaggcagta
ctgtgtgctggtctctacccaaaggttgcccacgtagataaggtgcctttcaatcgaaag
acgggacagaatagacctccaaggctaagcaccccagaggatggtcgagttcaaatccac
cctaagtctgtcaatgcaaatgaaacaaccttcagcagtaaatggttgctctaccatctc
aaactcaagtcaacaagtgtctttctccatgacactaccatggttgagccttatcccttg
atcttctgcggcggtaagatctcctgggacgatgaccagggccatgaaacggtctttgtg
gatgaccacatcaagtttcactgctctcaggagacggcacatctcgtcattaagttacgt
gaggagctagacagagtcatggaacagaagatcaccaacccaggacccaccaactggagt
ccggcaagccatgaaggcagagtcatgagggccatcatcgacatcctcgtcatgcagtcc
agagatacctacgataatgatgatcagggattcgtacacagcgctaggggcaataacagg
cacggtggtaatgatgatgatgatgatgatgactgttatgatgatgaagctggtgaggct
ggtggtggccgacaatatggacggtccggaaataggtacaataatgatgacaggcctgga
agcagtcattggagaccagactcgcatcgtaggagaattcaaggaaatccacaacaaggt
ttctggactcagaaataa
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