Strongylocentrotus purpuratus (purple sea urchin): 588322
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Entry
588322 CDS
T01019
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
588322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
588322
Spliceosome [BR:
spu03041
]
Complex B
Other components
Prp19-related factors
588322
Complex C
588322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_YTH1
zf-CCCH_4
Nup35_RRM_2
RRM_3
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
588322
NCBI-ProteinID:
XP_003729862
UniProt:
A0A7M7GKI9
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MAVSKSANTYNRLNWEEADFPILCQTCLGDNPYVRMTKEKFGRECKICQRPFTIFRWCPG
ARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAALNVKDEMPKSDVNKEYYSQN
MERELANAEGNQALGAVGKAQAPSDLLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRFYGVDDPVADKLMRRAAAMPKLEAPEDRMITTLYVGGLG
DKVTEEDLKGHFYQFGELRSINVVPKQQCAFVTFTNRQGAEGAAENSFQKLIIKGRRLNI
KWGKPQAQLGSGKKEDDSEKELNYEPVPGLPGVLPHPPQMNQDQGNAPFPPPMLPPPPMN
NPPHPHHAQFRPPPGYGMGMPPPPRLPPPPHHMHPGNRGRFPPPPPGGPPPRMPRYPPPP
PFGGRRDGPMPPHMRHRMPLPPPPNMPPPPRSQQGSGKPPAVHYPSQDPQRMGTGVEESS
SKS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagcaaaagcgcaaacacgtataatcgactgaattgggaagaggctgacttc
cccattctctgccaaacatgcctcggtgataacccctatgttcgtatgaccaaggagaag
tttgggcgggagtgtaagatatgtcagcgtcccttcaccatattccgctggtgtcctggg
gctcggatgaggttcaagaagacggaggtctgccaaacttgtagcaaactgaagaacgtc
tgccagacttgcctgctagatcttgagtatggtttaccaatccaagtacgtgatgctgcc
ctcaatgtcaaagatgaaatgcccaaatctgatgtcaacaaggagtactactcccagaac
atggagcgagagctggccaatgctgaaggtaaccaagccctaggtgctgtagggaaggcc
caggcccctagcgatcttctactcaagctggctaggaccacaccatactacaaaaggaac
agacctcatatatgctccttctgggtcaagggggagtgtaagagaggagaagagtgtccg
taccggcatgagaagccaacagacccagacgatcccttggctgatcagaacatcaaggat
cgtttctacggagtggacgatcccgtagccgacaagctgatgagacgagcggcggccatg
cctaagctagaggctcctgaggataggatgatcacaacgctctacgtcggtggcctgggg
gacaaagtcacagaggaagacctcaagggtcacttttatcaatttggtgagctgaggagc
atcaacgtggttcccaagcagcagtgtgctttcgtcaccttcacaaacaggcaaggagcc
gaaggagctgcagagaactccttccagaagctgatcatcaaaggtcgaaggttaaacatc
aaatgggggaagccccaagcccagctggggtcagggaagaaggaggacgacagcgagaag
gagctcaactatgaacctgtaccgggtctgcctggagtattaccacatccaccacaaatg
aaccaagaccaaggcaacgcaccattccctccccccatgctacctccccctcccatgaac
aacccgccccacccccaccacgctcagttcagaccccctccaggctacggcatgggtatg
cccccaccccctcggttaccccctcctccccaccacatgcacccaggcaacaggggaagg
ttcccccctccccctccaggtggaccacccccgaggatgccccggtatcctccgccccct
cccttcgggggcaggagagatggcccaatgccgccccacatgcgacacagaatgcccctt
ccccctcccccgaacatgcctccaccccccaggtcacagcagggtagcgggaagcctcca
gcggtacattacccctcccaggatccacagaggatggggacaggggtagaggaatcatct
tctaaatcttag
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