Strongylocentrotus purpuratus (purple sea urchin): 588613
Help
Entry
588613 CDS
T01019
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
588613
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
588613
Spliceosome [BR:
spu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
588613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
KH-I_KHDC4-BBP
MOEP19
KH_2
CMS1
KH_5
Motif
Other DBs
NCBI-GeneID:
588613
NCBI-ProteinID:
XP_030839262
UniProt:
A0A7M7NQU3
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MSDWEEEIENDMRGMSFSSQPQSQNTNRWSNDDYSNSQSTSNFRQDRSAPYGQGRARSSV
GRGGGTGYNGRDDDRSRARTTSSGIGRGRGIALERNNDRRNDGNDEGEWRGESRTWNSGR
YDSRRSSSPNWRKNERENNEAGSQDKQERWYGETGGGGGRRGDDERSRDDKGSLLVDNQY
LGRIIGKQGAKIRELEQESGARIKIMSRESDGYETTINLEGGEEAQAKAKKLIEELTDPD
FRGNTRKPQSSSFSFNSRNGADSNSQDDAPPKPRGPIDWKNLQAEQDIYLAQKWKDYPEV
IKDFYHEHSSIKALSEEETDALREVIGVSAVDDSAKELNRIIPKPVRTFEEAFEDYPEIL
REIYKQKFTKPSPIQSQGWPVALKGHDLIGIAQTGSGKTLAFLLPALIHTDLQPGARKSR
GGPNVLVLSPTRELALQIESEVNKYSYKGIKSVCVYGGGDRRKQIKVVSDGVEIIIATPG
RLNDLIMNKIVNVMSVTFLVLDEADRMLDMGFEPQIMKILLDVRPDRQTIMTSATWPEGV
RRLAKNYMKNPIHVNVGSLDLSACHNVTQLVEIVDEEEKRDRLIAFFETMTEDEKVLVFV
GRKVMADDLSCDMSMRNLSVQSIHGGREQYDRERALEDFKDGSVRILIATDVASRGLDIK
DITHVFNFDCPNHIEEYVHRVGRTGRAGRTGTSLTLMTKKDWRWAGDIIKIMEEAGQEVP
YELIEMAERWKRHQARMADGDRRGGGRGGGRGRGGGGGGFRGGRDRDSGGGGFGFSSGGG
GGGGGFGFGGRSGGGGRRGGERDEWW
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactgggaggaagaaatcgagaatgacatgcgaggaatgtccttctcatcgcag
cctcaaagtcaaaacacgaaccgttggagcaatgatgattattccaactcgcagtcgacc
agcaactttcggcaggaccgttccgcgccatacggccagggccgggcgagatcaagcgtg
ggccgtggcggcggcactggatacaacggtcgcgatgacgatcgaagccgagccaggacg
acatcatctggcattggtcggggccgtgggattgcgttggaaaggaataatgatcgtaga
aatgatggcaatgatgaaggagaatggagaggtgaaagtagaacttggaattcaggtcgg
tatgacagcagacgatcgtcaagtcccaattggagaaagaatgaacgtgagaataacgaa
gcaggatcgcaagataaacaagaaagatggtatggagaaacaggaggaggaggaggaagg
agaggagatgacgagagatcaagagatgataaaggatctcttttagtggacaatcagtat
ctgggcagaataataggaaaacaaggggcaaagatcagggaactagaacaagagagtggt
gccagaataaagatcatgtcccgagagtctgatggatacgagactacaatcaatctagaa
ggaggagaagaagcacaagcaaaggccaagaaattgatagaagaactgacggatccagac
ttcagaggcaacactagaaagccacagtcttcaagtttcagcttcaatagtagaaatgga
gctgatagcaatagccaagatgatgcacctccaaaaccgagggggccaatcgactggaag
aatctacaggcagagcaggatatatatctagcacaaaaatggaaagattaccctgaagtc
atcaaggatttctaccatgagcacagctctatcaaggccttatcagaagaggaaacagat
gctctcagggaggtgattggtgtgtcagctgtagatgacagtgcaaaggagctcaatcgt
atcattccaaaaccagtcagaacatttgaagaagcatttgaggattatcctgaaatcttg
agggagatttacaagcagaaattcaccaaaccatcgcctatacagagtcaaggttggccc
gtggcgctcaaaggtcatgacctgataggcatagcacagactgggagtgggaagacacta
gcattcctcttaccagctcttatacacacagacttacagccaggggctcgtaagtctcgt
ggtggacctaacgttcttgtgctctcaccaacccgtgaacttgcccttcagatagaatca
gaggtcaacaagtattcctacaagggtatcaaaagtgtgtgcgtctatggaggtggcgat
aggaggaaacaaatcaaggtagtgtctgacggagtggagatcattatcgctacaccaggc
aggctcaatgatctcatcatgaacaagattgtgaatgtcatgtcagttacatttttggtg
ctagacgaagctgatcggatgcttgacatgggctttgaacctcagatcatgaagattcta
ctggacgtgagacctgacagacaaaccatcatgacaagtgctacatggccagagggagtg
aggcgtctggctaagaactacatgaagaacccgatccatgtcaatgtaggatcattggat
ctatctgcttgccacaatgtaactcaactcgttgaaatcgtagacgaagaggaaaagaga
gacaggctcattgcgttctttgagacgatgacagaagatgagaaagtactagtctttgtt
ggaaggaaagtcatggcggatgacctgtcatgtgacatgagcatgaggaacctgtctgta
cagagcatccatggagggagagaacagtacgacagagaacgagcgctggaggatttcaaa
gatggctctgtacgtatcttgattgcaactgatgtggcctctagaggattggatatcaag
gatatcacacacgtctttaactttgactgtcctaatcatatagaggagtatgtccacaga
gtgggtaggactggaagagctgggcgtaccggtacctctctaaccttgatgacgaagaag
gattggcgttgggctggtgacatcattaagatcatggaagaagcaggccaggaagtaccg
tatgagctgattgagatggcagagaggtggaagagacatcaagctaggatggcagatggc
gacaggagaggaggaggaagaggtggaggacgaggaagaggaggaggaggaggcgggttc
agaggggggcgtgacagggactccggagggggaggctttgggttcagtagtggtggtggt
ggtggtggtggtgggtttggctttggaggtaggagtggaggaggggggaggaggggtggg
gagagagatgagtggtggtaa
DBGET
integrated database retrieval system
