Strongylocentrotus purpuratus (purple sea urchin): 588871
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Entry
588871 CDS
T01019
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
588871
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
588871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
588871
NCBI-ProteinID:
XP_030855032
UniProt:
A0A7M7PRQ0
LinkDB
All DBs
Position
Unknown
AA seq
1515 aa
AA seq
DB search
MNRRPRAGETEEDLLRLQAQFVKEKPKPSVTIKKADKRKASSSGSNTGSTGSSTSGPSVG
ATVTKDVVTLPGLPTNLLEAEQALASHPQKRSKFKARQDPNSSRAAPQSHLPGQRVTFNL
DDDDEDPEAAMDRQDTHITAVLSKIREQDIRQKPAFLPQPTNKAFPTALHRSQAPKQASG
LKTGKKRSLFAQQFDSTPAVDFGVTLGPPPKVVTDEQHCDADVAMETNDSSLPSQSNVKP
ISGTVPSSSSSSVSYSGILKDSGQMNEGVPNEAAMQTTQDIQTENQSKMAAMSEEEILLE
QAKLKAMLDPSLVAFLQARKKGTVQNKNGSNQESPPMSEPVSVISPSTQRVPDNEAGEQM
DTGMKEGDVADSLEDKDISDRKADEITSTTEDKNGKVPVDVKSEWLNMKKREDDKLQWMD
DLPKPSAKSQTGSQARFDFNGQLVARDALVSVREGLFHHGAEQEVPGYTLEELFTLSRSA
VIQQRVLALQTLARLIYNYRADCLGGQLRSPLISRLLKAGVLFLLRWSLDDTNEGVHSAG
VEALAALLVQPGDEEALDKTFTWHLGCSVPPMLPRKDAQGDEDEDEDDDLDDDDEEEEEE
EEQKQTKPDEHIASQDVIKGLLKMSVLPRLRYILEVVRPTPPVILNILAFLIRMARHSAE
AALEVMKCPRLMDTIIREFLPTSSWQKQDDPVSDLYGHPTTLAMKLVRVLCLSGRHIAAT
LLSKYPLLTIIIRYFSMEPTDMNLNVGEAFHLSIESLKTWSACVRYGLGCDAYRELYPLL
MQQLQIFQRLSVLPLPSTVEKTTCLVHRLQLIRATALISLLEGVVQVAGTAAELQGKFAM
RNDATNKEAPREAISPPPIDWSHVTGLATPLETCTHRWLVEMTGCTEVLSPEASSLAGSA
MDFLATFYSNYTLQASYNPVNSLNQVETFVDGVLLPYMKSSSFYSAVHNLQVHSSLTYRP
TNHKRYSTRALPSFSCHSDDSSDETLPCVRKTSTLGYGAALFRLTYQMIKIHKGVAPRFE
PIVLSCYVLPYLENFCADGACGSVGLAEHFAVHEHTAVYFLIKIFQCVVQQVDSCKHHSQ
LYHSAAMKLLARLQPGYEHYAHDLLSMILFSTEFLAEGNVGDPMASDLAEFLTFSDKEPT
RKERDMSKGELLQEAYQRLASIRNLYMVYFGKEQPSLARSRARCTGRHHEVTSLNLPPFL
GPVLPIDWPFLPLVQIFSEAQKAEMKGKTVKSLPPHIMGAITDTLGWVFILETWRPLTLR
SIPLAAKIARLYCIFLTASDLFMEPSIHHYLAALLKIYTSQDYMKDMDFDQEIPGLGSFN
DLFNAVLAQYEAVSFGDLLFSHYVLLPLQQRFSIHFRKTLWFDHIDLLRTLPSHPSKCPI
PTHNFLDPPERDPSLISMYFQNLVQGKVRPTWCPMMHLVAVHHVANFMFSSGQGKAETVR
ETTAKLKLIKSTMGLHNEDLKQLLLLYRGPDTTNPNGYTTYESLPEDRSVVLQAAERAIQ
EQRSKKMDTVKEGQS
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaaggccacgtgcaggagagacggaggaagatcttcttcgacttcaggcccag
tttgtgaaagagaaacccaagccatcggtgaccatcaagaaagcagataagcgcaaggca
tccagctctgggtcaaacactggaagcactggttcctctacgtctggcccttctgttgga
gcaactgtcactaaagatgttgtcacattaccagggttaccaacaaaccttcttgaagca
gaacaagctttggcttcacatccacagaagaggtcaaagttcaaagcaagacaagatccc
aattcatcgagagctgcaccccaaagtcatctacctggacaaagagtgacctttaacctt
gatgatgatgatgaggatccagaagctgctatggataggcaggatactcacataacagca
gtattgtccaagatacgggaacaagatatcagacagaaaccagccttcctcccacagcca
acaaataaagcattcccaactgctcttcatcgatcacaagcaccaaagcaggcaagtgga
ttaaagacagggaagaagcgcagtctctttgctcaacaatttgactctacacctgctgtt
gactttggtgtcacattgggacctcctccgaaggttgtgactgatgaacaacattgtgat
gcagatgttgccatggaaacaaatgattcatcgttgccatcacaatcaaacgtaaaaccg
atatctggaacagtaccatcatcatcatcttcatcagtgtcatatagtggtatattgaaa
gatagtggtcagatgaatgagggcgttcctaatgaagctgccatgcaaaccacacaggac
attcagactgaaaaccaatccaagatggctgccatgtcagaggaagagattctcctggag
caagctaaactaaaagcaatgttagatcctagtttagtagccttccttcaagcaagaaaa
aaaggcactgttcaaaataaaaatggcagtaatcaagaatctccaccaatgagcgaacct
gtctctgtcatatctccgtcaacacagcgtgtgcctgacaatgaagctggtgaacagatg
gatacaggaatgaaagaaggtgacgtagcagattctttagaagacaaagatatttcagat
agaaaagctgatgaaatcacttctactacagaagataaaaatggaaaagtaccagtagat
gtgaagagtgaatggctgaatatgaagaagagagaagatgataaactgcaatggatggat
gatttgcccaagccatctgccaagtctcagaccgggtctcaggctagatttgatttcaat
ggtcagctggtggctcgagatgctcttgtatcggtcagggaaggactctttcatcatgga
gcagaacaagaggtacctggatatacactagaggagttatttacactgtctcggagtgca
gtcatacagcagagagtactagcactacaaacacttgcaagactcatctacaattacaga
gcagactgtcttggtggtcagttaagaagtcctctgatctccagactcctgaaagctggt
gttctattcctcttgagatggtccttagatgatactaatgaaggagttcactctgcaggg
gttgaggctctagcagctcttcttgtccaacctggtgatgaggaggccctagataaaacc
ttcacatggcacctaggatgcagtgtacctcccatgctaccaaggaaagatgctcaaggt
gatgaagatgaggatgaagatgatgatctcgatgatgatgatgaggaggaggaggaggag
gaagaacaaaaacagaccaagccagatgaacatattgcaagtcaagatgtcatcaagggt
cttttgaagatgtctgtgttaccccgtctgcgttacatcctagaggtggtcaggccaaca
ccaccggtcatcttaaacattctagctttcctcatcagaatggcaagacactccgctgaa
gcagccctggaagtcatgaagtgccctcgtctgatggacaccattatcagagaattcttg
ccaacgagttcatggcagaaacaagatgatccagtttcagatttatatgggcaccctact
actcttgccatgaaactagtgagagtgttgtgtctcagtggtagacacatcgctgcaacg
ctgctatccaagtatccattgttgacaatcatcatccgatacttctccatggagcctact
gatatgaatctcaacgtaggagaagcgtttcatctcagtatcgagagcttgaaaacatgg
tcagcttgcgttagatacgggctcggctgtgatgcttacagagagttgtatcctctactg
atgcaacagctccagatcttccaaaggctgtcagtcctccctctgccatccactgtcgag
aagactacctgtttggtacataggctacagctgatcagagcaactgcattgatctctctg
ctggagggagtagtgcaggttgcaggaacagcagcagagcttcagggaaagtttgcaatg
agaaatgatgctacaaacaaagaggcccctagagaagcgatcagcccacctcccattgat
tggagtcatgtgactggtttggccacacccctagagacgtgtactcatcgctggttggtt
gagatgactggatgtactgaggtgctatcacccgaagcaagctcattggctggcagtgct
atggacttcttagctaccttctattcaaactacacacttcaggcatcttataatccagtg
aactcattgaatcaggttgaaacctttgttgatggtgtgctgcttccgtacatgaagtca
tcctctttctactccgcagttcataatctacaagtgcactcatcactgacataccgacct
acaaaccacaagagatactcaacgcgtgcactcccaagcttctcctgccatagcgacgat
tccagcgatgaaacgctcccttgtgtccgtaagacatcaacgttgggctatggtgctgcc
ctctttaggctgacgtaccagatgatcaagatacacaaaggcgttgcacccagatttgaa
cccatcgtactgagttgctatgtcctgccgtacttggagaacttctgtgcagatggtgcg
tgtggtagcgtgggccttgctgaacattttgcagtacatgagcatacggctgtgtacttc
ctcatcaagatattccagtgtgtggtccagcaagtagattcctgtaagcatcacagtcag
ttgtaccacagtgctgctatgaagctactagctagacttcagcccggttatgaacactat
gcacatgatctcttatcaatgattctcttcagtacagagttccttgcagagggaaatgta
ggagatcccatggcttctgatctggctgaattcctgacattctcggacaaggagccgacc
cgcaaggagcgtgatatgagtaaaggagagctcctgcaggaggcctatcagagattagct
agtattagaaacctctacatggtctactttggcaaggagcagccatccttggctagatca
agggctaggtgtacaggtagacaccatgaagtgaccagtctcaatctacctccattcctg
ggacctgtccttccaatcgactggcctttcttacctctggttcagatcttctcagaagcc
cagaaagctgagatgaaagggaagactgtgaagtccctccctcctcacatcatgggcgcc
atcacagacacactagggtgggtcttcatactggagacatggcgacctttgaccttgagg
tctattccactagcagccaagatagcgaggctctactgcatctttctcactgccagtgac
ttgttcatggagccatcaatccaccattacttggctgctctactcaagatctacacaagc
caagattacatgaaggacatggactttgaccaagagattccaggacttggatctttcaat
gatctgttcaatgctgtactggctcagtatgaagctgtatcctttggagatcttctgttt
tctcactatgtgctgctaccgcttcagcagaggttcagtattcacttccgtaagacactc
tggtttgatcacattgatcttctacgcaccttgcccagccacccatctaagtgtcccatt
ccaacacacaacttcctggaccctcctgagcgagatccatctctgatcagcatgtacttc
cagaacttggtccagggaaaggtgcggcccacctggtgtcccatgatgcacctggttgca
gtccaccatgttgccaatttcatgtttagcagcggacagggaaaggctgaaacagtacga
gaaacaacggcaaaactaaagctgatcaaaagcacaatgggccttcataatgaagatctg
aaacagttattactgctctacagaggtccagataccaccaacccaaacggttataccacc
tacgagtccttgccggaggacaggtcggtagtcctacaagcagcagagagagctatacaa
gaacagagaagcaagaagatggacacagtcaaagaaggacagtcatga
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integrated database retrieval system
