KEGG   Strongylocentrotus purpuratus (purple sea urchin): 589486
Entry
589486            CDS       T01019                                 
Name
(RefSeq) DDB1- and CUL4-associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:spu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spu03009]
    589486
   04121 Ubiquitin system [BR:spu04121]
    589486
Ribosome biogenesis [BR:spu03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    589486
Ubiquitin system [BR:spu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     589486
SSDB
Motif
Pfam: WD40 Sof1 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WD40_RFWD3 eIF2A Beta-prop_WDR19_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st MIOS_WD40 Beta-prop_WDR35_TULP_N KNTC1_N WD_LRWD1 PEP5_VPS11_N VPS11_N
Other DBs
NCBI-GeneID: 589486
NCBI-ProteinID: XP_794217
UniProt: A0A7M7RGG6
LinkDB
Position
Unknown
AA seq 446 aa
MPKVKVLSRNPDDYVRETKHDIHKVPRNYDPSLHPFEAPREYVRALNATKLERVFAKPFL
GSLEGHTDSVHCMRNHPTNLSTVVSGGCDGTVKLWDLSTRACQRSIQAHKGFVRGLCMDK
SGQFLFTVGDDKAIKKWRTFPDANETSPKPLNTIIGKNMFISIDHHWKEPKYATCGSQVD
IWDETHADPIRTYSWGSDSIHNIKFNPVETYMLGSCTQDRNIILYDMRGAAPLRKVVMEM
RTNTIAWNPMEAFTFTAANEDYNLYTFDMRNLKTALNVHMDHISAVVDVDYSPTGKEFVT
GSFDKTIRIYNVDKGHSREVYHTKRMQHVSCVRWSLDNKYILSGSDEMNIRIWKANASEK
LGKLNRREEASTLYNSKLKEKFQHHPQVKRISRHRHVPSLIYRETKTIRIQKESKKRKEH
NRRKHSKPGSVPFKPERKKHILAEVE
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgccgaaggttaaagttcttagtaggaatccagatgactatgtccgagagacgaagcat
gatatacataaagttccccgtaattatgacccatccttgcatccgtttgaggcaccgagg
gagtatgtgagagctctgaacgccaccaaactagaaagggtgtttgccaagcccttctta
gggtcactggaaggtcatactgattctgtccattgcatgaggaaccatccgaccaatctg
tcaacggtcgtctcaggtggatgcgatggcacggtcaaactttgggatctttcaaccaga
gcatgtcagaggtctatccaagcacacaaaggctttgtgagagggttatgtatggacaag
tctggtcagttcttattcacagttggagatgacaaagctatcaagaaatggagaacattt
cccgacgcgaatgaaacaagtccaaaaccattgaataccattataggaaagaacatgttc
atttcaatcgatcatcattggaaggagcccaagtacgctacgtgcgggtcacaggtcgac
atctgggatgagacgcacgctgaccccatcaggacgtactcgtgggggtcagacagtata
cacaacatcaagttcaacccagtggagacttacatgctaggtagctgtacccaggacagg
aacatcatcttatatgacatgagaggggcggcgccactcaggaaggtcgtcatggagatg
agaacaaacaccatcgcatggaatccaatggaggctttcacattcacagcagccaatgaa
gattacaacttatacacatttgacatgaggaatttgaagactgccctcaatgttcacatg
gaccacatctcagcggtggtggatgtagattactcaccgactgggaaggagtttgtgact
ggtagctttgacaagaccatcaggatatacaatgtggataagggacatagccgtgaggta
taccatacgaagcgtatgcagcatgttagctgtgtaagatggagtctggataacaagtac
attctcagcggctctgatgagatgaacatcaggatatggaaggctaatgcatcggagaag
ctcggaaagctgaaccgaagagaagaggcatccacactgtacaattccaaactgaaggag
aagttccagcaccacccgcaggtgaagaggataagcagacatcgccatgtaccgagtctg
atctacagggagaccaagactatacgcatccagaaggagtcaaagaaacgaaaggaacac
aacaggaggaagcacagcaaaccaggatcagtcccgttcaagccagagagaaagaaacac
atcttagcagaagtggaatga

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