Strongylocentrotus purpuratus (purple sea urchin): 589616
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Entry
589616 CDS
T01019
Name
(RefSeq) general transcription factor IIH subunit 2-like isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03022
Basal transcription factors
spu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
589616
09124 Replication and repair
03420 Nucleotide excision repair
589616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
589616
03400 DNA repair and recombination proteins [BR:
spu03400
]
589616
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
589616
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
589616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
VWA_3
HypA
Motif
Other DBs
NCBI-GeneID:
589616
NCBI-ProteinID:
XP_794347
UniProt:
A0A7M7REF6
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MADDEPEKGYTWEGDYERTWEALQEDEEGSLQATVDDIIQRAKRRRLEDRPSNVRLGMMR
HLFILLDCSRSMEDQDLKPNRLACCTKLLEHFIEEYFDQNPISQVGIITSSNMRAEKLTE
LGGNPQRHITALEKCNDKPCVKEPSLQNALELAAATLRHMPGHASREILVIMGSLTTCDP
GNIHDTIQAMKDHSIRCCVIGLAADVRVCRKLATVTHGTYGVILDETHFKELLMEHTIPP
PARVNTEPSPIRMGFPQHVIHTDKSKVSAPSMCMCHLDGKNSEGFGTGGYFCPQCQSKYC
ELPVECRVCGLTLVSAPHLARSFHHLFPLDRFEEFKREDHDHPDSLFCQGCQSHIRDQTA
YRCPKCSNVFCLDCELFIQESLHSCPGCASTRPSQSQHRQTNGSHILHS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacgaacctgagaagggctatacgtgggaaggagattatgaaaggacctgg
gaggctctccaagaggatgaagaaggctcactccaggccactgtggatgatatcatccag
agagcaaagagaagaagattggaggatcgacccagcaatgtcaggcttggcatgatgcgg
catctgttcatcctgttggactgttcacgttcgatggaagatcaggacctcaaacccaac
agactggcttgctgtaccaagttgcttgaacattttatcgaggaatactttgatcagaac
ccaattagccaggttgggatcataacatccagtaacatgagagcagagaaattaactgaa
cttggaggtaatcctcagagacatatcacagctttggagaagtgtaatgataaaccttgt
gtgaaagagccttctttacagaatgcattggaactggcagctgcaactcttagacacatg
cctggccatgcgagtcgagagattcttgtaatcatggggagtttgactacgtgtgatcca
ggcaacatccatgatacaatacaggccatgaaagaccatagcatacgctgttgtgtcatc
ggtctagcagccgacgtgagagtgtgtcgtaagctagctacagtcactcatggtacatat
ggagtgattcttgatgagacacatttcaaagaactcttgatggaacacacaatacctccc
cctgccagggtgaatacagaaccatcaccaattagaatgggttttccacagcatgtgata
cacactgacaaaagcaaagtcagtgcaccatcaatgtgtatgtgtcacctggatggtaag
aactccgaggggtttggaactggtggctacttctgccctcaatgtcagagcaagtactgt
gagctaccggtcgaatgcagagtatgtggtctgacactcgtctcggctccacaccttgcc
cgttccttccatcatctcttcccgctcgacaggtttgaggaattcaagagagaagaccat
gatcatccagattctttattctgtcaaggatgccaatctcacatcagagaccaaacggca
tatagatgtcccaagtgcagcaacgtattctgtctcgactgtgagctgttcatacaagaa
tctcttcattcctgccctggctgtgcaagcaccaggccatctcaatcacaacaccgtcaa
accaatgggagccacattctgcatagctga
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