Strongylocentrotus purpuratus (purple sea urchin): 590155
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Entry
590155 CDS
T01019
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
590155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
590155
Enzymes [BR:
spu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
590155
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
590155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
590155
NCBI-ProteinID:
XP_030851951
UniProt:
A0A7M7PJ06
LinkDB
All DBs
Position
Unknown
AA seq
1735 aa
AA seq
DB search
MSVREIPSKRVDSVRFSTYSSQDLKQLSVKELTNPRSFDDLGHPTLGGLYDPALGPSDRD
ELCGTCSLGQFHCPGHMGHVTLPLPVFNPLFFPLVRQLLHGSCLECNHLLAPRWTLRLVV
QQLRCLDHGLLGSVGDLAEIASTVISESDDGEGLADQMEETLKEYVDEILSKLKKEQPSE
ARHIEECRRHVIQSFIRQHVASRGRKCPLCKKPVREIRPHHNSVILTKVISASGQGLQMV
YLSPHEARKHLRNLMANDGEGLCHIFGVLDLPSKRGEDSTIDQFFLEALPVIPSKFRPIS
TAGEKTFENPQTGNLSKVLKDCHVLHLLLRVMRQSTSQHDVENGAMDIDVKLPVKDKENV
DQSILSTIPGKTLPEKLQNALTQLQTHVNCVIDSDLDKISTDKAPGIKQLLERKEGLFRK
HMMGKRVNYAARSVISPDPYINTDEIGIPQVIAKRLTYPQPVTDWNAQELRQMVMNGPDV
HPGALLIENEDGSQVRLRADNQSQRESVAKRLLTPSNINKQNTGSKKVHRHLQTGDIVLL
NRQPTLHKPGIMAHKVRVLPGEKTLRLHYSACKTYNADFDGDEMNVHFPQNELGRAEALT
IASTNHQYLVPKDGTPLGGLIQDHIISGVRMTVRGRFFTRLEYQQLVYCSLTDKEGPVKC
LPPCIRKPALLWSGKQLISTIIINTIPEGCKPLDFIGKSKINNKSWCKAEPRPPKAGGGA
LVGTDMCESEVIIREGELLSGVLDKGNYGPTPYGLVHCIYELYGGHIAGKLLSHFGRLFT
TFLQQHTGFTLGPEDIIVLDKADEKRLDILEESKDCGSEAVAQALGVEEFTGFHANTLTK
RYEDAHRKPDGSDMKEIDLQMKTKTDLYSNQVSSTCLGSGLLKQFPENNLQLVVLSGAKG
SMVNCLQISCLLGQIELEGRRPPLMVSGRSLPSFPPYETSPRSGGYVAGRFLTGIKPQEY
FFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVNYDQTVRDSDGSIVQFQYGEDGL
DILRTPFLHKEQFQFLIENANAHLPSQSKYRGPANDPSQAEKLFRKIKRWKEKHSDSSRS
ERRSPFLEFCHKEYPSILENAQSDEDNVRKAYNKAKKRIIRRWREVTDRHRYEKKTAPCP
DPVSCQMRPDRHLGAISEKLESLLQDYLDSRLPTSDDADGTKREDEETKLKNMMYSKYQR
ALCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGDMNVTLGIPRLREILMVASANIKTP
SMTIPFLNPDISTKKIGRICRQLSRVHLSQVIEDIDIWESYDFPTTHDHYRVYKIRLNFL
PHEEYKDELNATPASILSYIEVTFLKQFLEIVKRKMKDLKKANFASSRKSKLDLIGDGGN
AAPTQDKNGTDPAMQEDEPASVSRNRDSISSEGSGDEEGDGTASKYKKKHDEEKEYEDDG
GEEAEEEMEGEWEEIIDTGGDGGSGKADSPGTPDEDDGGDADDEAMEEDLLSSQLDESQS
SSRKKKKRQVAISDKEKDQRILATVNLSPLMVTYDFDAEDQLWCEFKFKVDLTDNKLDMA
SLVELVSKQATVHHVPGISRCLVSGQGSGETKLLTEGVNLHELYKHDKLLDLNKAYTNDI
HSMANAYGIEAASKAIIKEVRDVFSVYGITVDPRHLSLVSDYMTFEGVYRPFNRIGLESN
ASPIQKMTFESCMRFLREATIQGAKDNLQSPSARLVVGRVVNGGTGCFDLIQPLK
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcgagagattcccagtaaacgtgttgattctgtgaggttcagcacatacagc
agtcaggatctaaagcagctgagtgtgaaggagttaactaaccccaggtcgtttgatgac
cttggacacccgaccttaggagggctctatgatcctgcactaggtccaagtgacagagat
gagctttgtggaacatgcagcttgggtcaatttcactgtccaggtcacatgggtcatgtg
accttgccacttcctgtcttcaatccacttttcttcccacttgtccgccagctcctacat
ggtagctgtttagagtgtaaccacctcctagcccccagatggaccctgcgtctggtggta
cagcagctgcgttgcttggaccatggtctacttggtagcgtaggagaccttgctgagatt
gctagtacagtcatatcagagtcagatgatggggaaggattggcggatcagatggaggag
actctcaaggaatatgtggatgaaatattgtctaagcttaagaaagagcagccttctgag
gcacgtcatattgaggagtgtagacgtcatgtgatccaatccttcatacgtcagcacgta
gcatcaagaggtaggaagtgtcctctatgtaagaagcctgtacgtgagatccgtcctcat
cataacagtgtgatcctcaccaaggtgatcagtgcgtccggtcagggcctgcagatggtc
tatctttctccacatgaggctaggaaacatctcaggaacctgatggcaaatgatggtgaa
ggtctatgtcatatatttggagtgcttgatctacccagcaagcgaggtgaagactcaacc
atagatcaattcttcttagaagcgctaccagtcatcccttccaaattcagaccaatatcc
acagcaggagaaaagacctttgagaatccacagactggtaacctatctaaggtactaaaa
gattgccacgtattgcatctcctattacgagttatgaggcaatctaccagtcagcatgat
gtagagaatggtgccatggatattgatgttaaactgccagttaaagataaggagaatgtt
gatcagagcatattaagtactatcccaggaaagactctaccagagaagcttcagaatgct
ctaacccagctacaaactcatgttaactgtgtcattgacagcgaccttgacaagatttct
actgacaaagcaccaggcatcaaacagcttcttgagaggaaagagggtctgttccgcaag
cacatgatgggcaaacgtgtgaactacgcggctcgttcagtcatctctcccgatccgtac
atcaacaccgatgagataggtatcccacaagtcattgccaagcgtctcacatacccccaa
cctgtgactgattggaatgcacaggagctgagacagatggtcatgaatggacctgatgta
catccaggtgctttactgatagagaatgaagatggttctcaggtcagactacgagcagac
aaccaatcacagagagaatcggttgctaagagattgcttacacctagcaacattaataaa
cagaacactggatcaaagaaggttcatagacatttacagactggtgatatagtcttgctg
aatcgtcaacctacgcttcataaaccaggcatcatggctcataaggtcagagttctaccc
ggtgagaagacactacgcttacactactcagcatgtaagacatacaacgctgactttgat
ggagatgagatgaacgtgcatttcccccagaatgaactgggtcgagcagaggcactcact
atagctagtaccaatcatcagtacctggttcctaaggatggtacccctctgggtggtctc
atccaggatcacattatatcaggggtgaggatgacagtcagaggaaggttcttcacaagg
cttgaataccaacagcttgtctactgttcactgactgacaaagagggcccggtcaaatgt
cttcctccgtgtatcaggaagcctgccctcttgtggtccgggaagcagctgatctcaact
atcatcatcaataccatacccgagggatgtaagccgcttgacttcattggaaagtcaaag
atcaataataagtcctggtgtaaagcagagcctaggccacctaaagcaggtggtggcgcc
ctcgttggtacggacatgtgtgagtctgaggtgatcataagagaaggagagctgctgagt
ggtgtgttagacaagggcaactatggacctacaccctatggattagtgcactgtatttat
gagctgtacggtggtcatatagctggtaaactgctgagccattttggacgtctcttcacc
accttcctgcagcagcacactggcttcacgctgggacctgaagacatcattgtcctggac
aaggccgatgagaaacgtcttgatatcttggaggagtctaaggactgtggatcagaggct
gttgctcaggcgttgggtgtagaggagttcactggtttccatgccaacaccctcacaaag
agatatgaagatgcccatagaaagcctgatgggagtgatatgaaggagattgatctacag
atgaagactaagacggatctttacagtaaccaagttagctctacctgtctgggctctgga
ctacttaaacagttccctgagaacaacctacagctcgttgtcttatctggtgctaaggga
tctatggtgaactgtcttcagatctcctgtctgcttggtcagatagagttggaaggacgt
cgtccacccctgatggtcagcggtcggtcactcccgtccttcccaccctatgagactagt
ccaaggtctgggggatacgtggctggacggttcctgactggaatcaaacctcaggaatac
ttctttcattgtatggctggtagagaaggtctggtggacacagcagtgaagacaagtcgc
agtggttacctccagagatgtatcatcaaacatctagagggattggtagtcaactacgat
caaacagtcagggatagtgatggcagtatagtgcagttccagtatggtgaagatggtcta
gatatcctcaggactccgttcctacacaaagaacagttccaattcctgatagagaatgcc
aatgctcatttgccatcacagtccaagtatcgtggaccggccaatgaccccagtcaggca
gagaaactattcaggaagatcaagagatggaaagagaagcattctgatagctccagatca
gaacgaaggtctccattcctagagttctgtcataaagagtatccatccatcttagagaat
gctcaatctgatgaagataacgtaaggaaggcttataacaaggctaagaagaggatcatt
aggagatggagagaagtcacagataggcataggtatgagaagaagacggctccctgtcca
gaccctgtcagctgccagatgagacctgatagacatcttggagctatctcagagaaacta
gaatctctcctacaagactatctagactcaagattaccaacatcagatgatgcagatggg
actaagagagaagatgaagagactaaactgaagaatatgatgtatagcaagtatcagaga
gctttgtgtgatccgggagaagctgtaggtcttcttgcagctcagtcgattggagaacct
tcaactcagatgacattgaatacctttcattttgctgggcgtggtgacatgaacgtaaca
ttgggtatcccaagactcagggagattctgatggtagccagtgccaatataaagacccct
agtatgacgataccattcctcaatcctgatatctcgactaagaagattggtaggatatgc
agacagctcagtagagtacacctgtcacaggtaattgaagatatagacatctgggaatcc
tatgactttcctaccacacatgatcactatcgtgtatacaagatcagactcaacttcttg
cctcatgaagaatacaaggatgagctaaatgccactccagctagtatcctgtcttacatt
gaagtgactttcctcaagcaattcctagagattgtcaagagaaagatgaaagatctcaag
aaagcaaactttgcatcatccagaaaatccaagttggacttgattggtgatggtggcaat
gctgcccctacccaagataagaatggaacagacccagccatgcaagaagatgaaccagcc
tctgtgtcaagaaacagagattccatttcatcagaggggagtggtgatgaggagggtgat
ggtacagcatctaaatacaagaagaaacatgatgaagagaaggagtatgaggatgatgga
ggagaggaagcagaggaggagatggaaggagaatgggaagaaatcattgatacaggtggt
gatggaggtagtggaaaagcagatagccctggtactcctgatgaagatgatggtggtgat
gcggatgatgaagcaatggaagaagacttactctcatctcagctggacgagagtcaatca
tcatctaggaagaagaagaagagacaggtggccatcagtgataaggagaaggatcagaga
atactggctacagtgaatctgagtccattgatggtgacgtatgactttgatgctgaagat
cagctatggtgtgagttcaaattcaaggttgatttgactgataataagctggacatggct
tcactggtagagctagtctctaaacaagccaccgttcatcatgtaccaggaatctctcgc
tgtctggtgtctggtcaagggtctggtgagactaaactactcactgaaggagtcaatcta
catgagctgtataagcatgacaagctactagacctgaacaaggcatacaccaatgatatt
cattccatggccaatgcctatggtatagaggcagcatccaaagctatcatcaaggaggta
cgtgatgtgttctcagtgtacggcatcacggtagaccctcgtcatctctcattggtttct
gactatatgacctttgagggtgtgtatcgacctttcaaccggatcggtctggagtccaat
gcctctccgatacagaagatgacgtttgagagctgcatgaggttccttagagaagctact
atacaaggtgctaaagacaacctgcagtctccctctgcacggcttgtagtaggcagagta
gtcaatggtggaacaggatgctttgatctcatacaacctctcaagtag
DBGET
integrated database retrieval system
