KEGG   Strongylocentrotus purpuratus (purple sea urchin): 590531
Entry
590531            CDS       T01019                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    590531
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spu03041]
    590531
   03036 Chromosome and associated proteins [BR:spu03036]
    590531
Spliceosome [BR:spu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    590531
 Complex B
    590531
 Complex C
   U2 SnRNP specific factors
    590531
Chromosome and associated proteins [BR:spu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    590531
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT Htt_N-HEAT_1 HEAT_ECM29 HEAT_2 XMAP215_CLASP_TOG
Other DBs
NCBI-GeneID: 590531
NCBI-ProteinID: XP_030846634
UniProt: A0A7M7P680
LinkDB
Position
Unknown
AA seq 1337 aa
MAAAEFATREDFQRQIEELQTRTTSLRDQAKDEGPGKENENGERIGFGETGQFDNEIYDG
GKAHGKYDGYVYSIPTNEADEDEDDYSSSSLMQKNSYTAPSSLFAEAQKAGKDYDPMAEH
RIPRIMDREDEYRRLRLRQKMSPERNDPFADGGKTPDPSLATYAEIRKQQMMSKEEAAYK
HQIQEKSKAGELFIHKEVEKPKPAKRSRWDMARGGGEGAETPSTTPGIAPRKKASTWDQA
ESMTPSISRWDETPGRHKGGETPGAATPGAATPGATPSASTRIWEATPGHVTPGHVTPGH
ATPGHVTPGHATPGRATPSARRNRWDETPRTERETPGHGSGWAETPRTDRGGEGAPSETP
TPASKRRSRWDETPAGSGTPSATPMMQNGITPVGSKAAIMNTPTPSALRIMTPEQLQAWR
WEKEIDERNRPLSDDELDTLFPEGYKVLTPPAGYVPIRTPARKLTATPTPMGGLSGFSMQ
QDGGLVDAGLAQPPGNLPVLKPDDTQYFGKLLNDVDESTLSPEEAKERRIMKLLLKIKNG
TPPMRKAALRQITDKARDFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLV
RPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNLDEYVRNT
TARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLRNLV
EIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFL
KAIGYLIPLMDPEYANYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEEDYIR
DEVLPSFFKHFWQHRMALDRRNYRQLVDTTVEIANKVGASEIIVRVVDDLKDEAEQYRKM
VMETIEKVMDNLGASDIDSRLEEQLIDGILYAFQEQTTEDSVMLNGFGTIVNALGKRVKA
YLPQICGTILWRLNNKAAKVRQQAADLISRIAIVMRTCQEEKLMGHLGVVLYEYLGEEYP
EVLGSILGALKGIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGA
EYVSAREWMRICFELLDLLKAHKKSIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQ
NRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIY
AVTPLLEDALMDRDLVHRQTACAAIKHMSLGVFGFGCEDALIHLLNFVWPNIFETSPHVI
QAVMEAIEGLRVGVGSIKMLQYALQGLFHPARKVRDTYWRIYNTLYIGAQDSLVAGFPRV
PNDEKNQYLRYELDYVL
NT seq 4014 nt   +upstreamnt  +downstreamnt
atggcggccgcagaatttgctactcgagaagatttccagcggcagattgaggagttgcag
acccgcaccacatcacttcgcgaccaagccaaggatgaagggcctggtaaagagaacgag
aatggagagaggatagggtttggagagacgggtcaatttgacaatgagatctatgatggc
ggcaaggcacatggcaaatatgatggctacgtctactcaattcccacaaatgaagcagat
gaggatgaagatgactacagctcaagtagcctcatgcagaagaattcctacacagcaccc
tcatcgttgtttgcggaagcacagaaagctggaaaggactatgaccctatggccgagcat
cgcatacctcgtatcatggatagagaggatgaatacagaagactccgactcaggcagaag
atgtctccagagaggaatgatccatttgcagatggcggcaagacaccagacccgagcctc
gccacctacgccgagatcagaaaacagcagatgatgagcaaagaagaggctgcttacaaa
catcagatacaggagaaaagcaaggcaggtgaactcttcatccacaaagaagtcgagaaa
cctaaaccagctaagagaagcagatgggacatggcaaggggaggtggtgagggtgcagag
actcctagcaccacaccaggcattgcaccaaggaagaaagctagtacatgggaccaagct
gagtctatgactccatccatcagtcgttgggacgagacccccggtagacacaagggaggg
gaaactccaggagccgctacacctggagccgccacacctggtgccacgccctctgccagc
acccgtatttgggaggccacacccggccatgtcactcccggtcacgtcactccggggcat
gctacaccgggccatgtcacgcccggtcatgcaacccccggtagggccacacccagtgca
aggagaaacagatgggatgaaactccaaggacagaaagagaaacccctggccatggtagt
ggctgggccgagacaccacgtacagaccgtggaggtgagggtgccccgtctgagacaccc
accccagccagcaagcgccgctcacgatgggacgagaccccggccggtagcgggacaccg
tcggctacccctatgatgcagaatgggatcacccctgtaggctccaaggcagccatcatg
aacacaccaacaccgtcagctctccgcatcatgactcccgagcagttgcaagcttggcgt
tgggagaaggagattgacgagaggaaccgacctctctctgacgatgaacttgatacgctc
ttccctgaaggatacaaagtattgaccccgcccgctggttacgtacccatccgcactccc
gcccgtaagctgacggcgacgcccacccccatgggtggcctgagcgggttcagcatgcag
caggacggaggtcttgtggatgcagggttggcccaaccacccggtaacctacccgtcctc
aaaccagatgatacgcagtactttggcaagctactgaatgatgttgatgagagcaccctt
agccctgaagaagccaaggaaagacgcatcatgaagctcctccttaagatcaagaacggc
accccacccatgaggaaggctgcccttagacagatcacagacaaggccagggactttggc
gccggacctctcttcaaccagatcctacctctcctcatgtcaccgaccctggaggaccaa
gagcgccatctgttggtgaaggtcattgatcgtatcctctacaagctggatgacctcgtc
aggccctatgttcacaagatccttgttgtgattgagcccctgctgatcgacgaggactac
tacgcccgcgttgaaggtcgtgagatcatctccaacctggccaaggccgctggtctggcc
accatgatctctaccatgcgtcccgacattgacaacctggacgagtacgtccgtaacacc
acggcccgtgccttcgccgtcgtcgcatctgctctgggtattccctccctgctgcctttc
ctcaaggctgtgtgccgcagcaagaagtcctggcaggctcgtcataccggtattaagatc
gtccagcagatcgctatcctgatgggatgtgctatcttgcctcatctgaggaacttggtg
gaaatcatcgagcatggtttggttgatgagcagcagaaggtgcgtactatcactgccctg
gccctggcagccttggctgaggcagctacaccctacggtatcgagtcctttgacagtgtc
ctcaagcctctctggaagggtatcaggcaacacagaggaaagggtcttgccgctttccta
aaagccattggctacttgatcccgttgatggaccctgagtatgctaactactacaccaag
gaagtgatgttgatcctcatccgtgagttccagtctcctgatgaagaaatgaagaagatt
gtcttgaaggttgtgaagcagtgttgtgcaactgatggtgtagaggaggattacatcaga
gatgaagtcctgccgtctttcttcaagcatttctggcagcacagaatggccctcgatagg
cgcaactacagacagcttgtggacaccacagtcgagatcgccaacaaggtcggagcatcc
gagatcatcgtcagggtggtcgacgacctcaaggatgaagcggaacagtacaggaagatg
gtgatggagaccattgagaaggtgatggataacctgggtgcatcggacatcgattccagg
ctggaggagcagctcattgacggtatcctgtatgccttccaagaacaaaccacagaggat
tctgtaatgctgaatggctttggtaccatcgtaaatgcccttggcaagcgagtgaaggcc
tacctgcctcagatctgtggtactatcctgtggcgtctcaataacaaggcagccaaggtc
agacagcaggctgctgacctcatctcaaggatcgctatcgtcatgagaacttgtcaagag
gagaagctgatgggtcatttgggtgtggtactgtatgaatacctgggagaagaataccct
gaggttctgggtagcatcctgggagctctgaagggcattgtcaatgtcatcggtatgcac
aagatgacccctcccatcaaagatcttctgcctcgtcttacaccaatcctcaagaatagg
catgagaaggtacaagagaactgcatagaccttgtaggacgtatcgcagaccgtggagct
gagtatgtgtcggccagagagtggatgaggatatgttttgagctgctagatcttctcaaa
gctcataagaagtccatccggagagctacagtcaatacctttggatacatcgccaaggcc
attggacctcatgatgtgttggccaccctgctcaacaacctcaaggtccaggagcgtcag
aaccgtgtctgtaccaccgtagctatcgccatcgtagccgagacctgctcaccgttcact
gtcctcccagcactcatgaacgagtacagggtgccggagctcaatgtacagaatggtgta
ctcaagtcactgtctttcctctttgagtatatcggtgagatgggcaaggattatatctat
gctgtcacgccgctgcttgaagatgcactcatggatagggatcttgtccatcgacagacg
gcctgtgcagccatcaagcacatgtcactcggagtctttggcttcgggtgtgaggatgcc
ctcatacatctccttaacttcgtctggccgaacatctttgagacgtcgcctcacgtcatc
caggccgtcatggaggccatcgaaggcctcagggttggggtcgggtccatcaagatgctg
cagtatgcattacagggcctgttccatccagcgcgtaaggtacgagacacgtactggagg
atatacaacacactctacatcggtgcgcaagactcactggtcgctggcttccccagagta
cccaatgatgagaagaaccagtaccttcgctatgaactagattatgtgctttga

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