Strongylocentrotus purpuratus (purple sea urchin): 590747
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Entry
590747 CDS
T01019
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
590747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
590747
Spliceosome [BR:
spu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
590747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_HPS5
WD40_like
Beta-prop_WDR19_1st
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
590747
NCBI-ProteinID:
XP_030853727
UniProt:
A0A7M7PMP1
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MSEEDGLSALKKPRVHYGTLEEHLKKTGVSDATGIVLEAGNINMSAGETFDMEEHISERR
KELLAEFERRRKARQITVSTDDSEVKAQLRKYGEPICLFSEGPAERRERLRHLLAALGEM
ADQDKQAKKANKEKAKDGEAEKQTTWYHEGPASLKNARLWIAEYSLPRADKRLEEAREAM
RIPESQTNARRQELHRKARSLTAIGSQIGDTRPISYCRFSPDSRLLATASWSGLIKLWTS
PDFSHYKTLRGHNAHVGCVVFHPQATLSLSPNACCMASCSADGAVKLWSFESEEPVANIE
GHEARVSRVEYHPSGRFLGTACFDSSWRLWDLEVQEEILHQEGHSKAVYSIDFQKDGAIC
ATGGMDAFGRLWDLRTGRCIMFLEGHLKSVLAVNFSPNGYQLATGSEDNTAKIWDMRQRK
VLYTIPAHQNLITGLKFQGTTGDYLITCSYDGTAKVWAHPGWSPLNTLAGHDGKVMCVDL
SPDEKYIATSSFDRTFKLWAPE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggatggactatccgccttgaagaagccgagggttcactatggcacactg
gaggagcatctcaagaaaactggtgtgtcagatgccaccggcatcgttcttgaagctggc
aacataaacatgtctgccggtgaaacatttgacatggaggaacatatcagtgaaagaagg
aaagaattattggcagagtttgaaagaagaagaaaggcaaggcaaatcacagtttcaaca
gatgattccgaagtaaaggcacagcttaggaaatatggagaacctatctgtctgtttagt
gagggcccagctgaaagaagagagaggctacgccatcttcttgctgctctgggggagatg
gctgaccaagacaaacaagccaagaaagccaacaaagagaaagccaaagacggagaagcg
gagaaacaaactacatggtatcatgagggcccagccagtttgaaaaatgccagactttgg
atcgctgagtattcattaccaagagccgacaagagattagaagaagctagagaagccatg
aggatccctgaatcacagaccaatgccagaagacaggaactgcacagaaaggccaggagt
ctaacagcaataggtagtcagattggagacacaaggcccatctcttattgtcgtttcagc
cctgactcaagactacttgccacagcatcatggagtggtcttatcaagctgtggacatca
ccagacttcagtcattacaagacactgagaggccataatgcccatgtgggttgtgtggtg
ttccatcctcaggcgacgctctcactctcacccaacgcttgctgtatggcttcgtgctca
gccgatggtgcagtcaaactctggagctttgaaagtgaggaacccgttgctaacatagaa
gggcacgaagccagggtaagcagagtagagtatcatccatcgggcagattcctaggcaca
gcatgctttgactcctcctggagactgtgggacctggaggtgcaggaggagattctccac
caggaggggcacagtaaagccgtctactccatcgactttcagaaggatggtgccatatgt
gctacaggtggtatggatgcattcggtaggttatgggatctgaggacgggccgttgtatc
atgttccttgaaggtcatctcaagtcggtacttgctgtcaacttctcaccgaacggctat
cagctagctactggaagcgaggataatacagctaagatatgggacatgagacagcggaaa
gtactctataccatccctgcacatcagaatctgattacgggactcaagttccaaggtact
actggagactacctcattacatgttcatacgatggcacagccaaggtatgggcacatcca
ggctggtcacctctcaacacgctggcagggcatgatgggaaggtaatgtgcgtcgacctt
tcacccgatgagaaatacatagcaacatcttcgtttgacaggacattcaaattgtgggca
ccagagtga
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integrated database retrieval system
