Strongylocentrotus purpuratus (purple sea urchin): 591457
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Entry
591457 CDS
T01019
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03022
Basal transcription factors
spu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
591457
09124 Replication and repair
03420 Nucleotide excision repair
591457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
591457
03400 DNA repair and recombination proteins [BR:
spu03400
]
591457
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
591457
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
591457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
SinI
Motif
Other DBs
NCBI-GeneID:
591457
NCBI-ProteinID:
XP_030840316
UniProt:
A0A7M7NS63
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MATSSEDAFDNSRKLDCKDLHGYLRTLQGSVLDRLYNHPATCLAVFRELPVLGKHCIMRV
LFIDTPIPQAAVTSWIQSNQQEQLHAALKTLTDLRLFRDQSLPGGLPGWLLNLTFRTNLK
TALIGGGKPWAISGKGGKGGKDKKVKETATLDKYSSERWECVLHFLVGSSKAVDTLSRDI
ATVLTHSGLMRLGESGGTPVITPSGFQFLLLDTPSQVWFFMLQYLETSQARGLDIVDALS
FLFQLSFSTLGKDYSSEGMTEQQLHFLQHLRELGLVFQRKRKSMRYYPTRLAINLASGVS
SMAKDDHKDGFIVVETNFRVYAYTESDLQVEILGLFCSMMYRFPNLSVAALTRESVQLAI
SNGITAEQILSFLRTHAHPNMRLKTPIVPPTISDQVRLWELERDRLSFTQGIIYNEFLSL
HDFEVLRDYAKDLGVLIWDSTARRIMIVSPAGHDSVKKYWKRLKKGQVS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttccagtgaagatgcatttgataattcaaggaaacttgactgcaaagatctc
catggttatctacggacccttcaaggatctgtcttagatagactttacaatcatcctgca
acatgtctggctgtttttcgtgagcttccagttttgggcaaacattgcatcatgagggtt
ttgttcattgacactcccattccccaagctgcagtcacctcatggatacagagcaaccag
caggaacagctgcatgcagcactgaaaacattgacggatcttcgtctgttcagggaccag
tcactgcccggcggccttccaggatggcttctcaatctcaccttcaggactaatctcaag
actgctcttattggaggaggcaagccatgggcaatcagtggcaaaggtggaaaaggagga
aaggacaagaaagtgaaagaaacagctactcttgacaagtactcttcggaaagatgggag
tgtgtacttcatttcttggtgggctcctccaaggctgtagatacgttgagtcgagatatt
gctaccgtcttgactcattcgggtctcatgagattaggtgaatcgggaggaacgccggtg
atcacaccctctggttttcagttcctgctcctagataccccctctcaggtctggttcttc
atgctgcagtatctagagacctcccaggctcgaggtctagacatcgtagacgctctctcc
ttcctcttccaactcagcttctcaacgttaggaaaagactattcatctgagggcatgact
gagcagcagcttcatttcttgcagcatctgagagagctaggcttagtgttccaaagaaag
aggaagtccatgcgctactacccaaccaggcttgccatcaacttagcttcaggtgtatca
agtatggccaaggatgatcacaaagacggcttcatcgtcgtggaaaccaacttccgtgtc
tatgcctacacagagtcggatctccaggttgaaatactgggactcttttgctctatgatg
tacaggttcccaaacctttctgtggctgctttgacgagggagagtgtacagttagccata
tcgaatggaatcacagctgaacagattctaagtttcttgagaactcatgcacaccctaac
atgagactgaagacacctatcgtacctcctactattagtgatcaggtcagactgtgggag
ctggagagagacagactcagtttcacacaaggtatcatatacaatgagttcttgtctctt
catgactttgaggtgctacgggactatgctaaggaccttggtgtacttatctgggatagt
actgcaagacgcatcatgatcgtttctccggcagggcacgatagtgtcaagaagtactgg
aagcgattgaaaaaaggacaagtgtcgtag
DBGET
integrated database retrieval system
