Strongylocentrotus purpuratus (purple sea urchin): 592373
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Entry
592373 CDS
T01019
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
592373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
592373
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
592373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
592373
NCBI-ProteinID:
XP_030836185
UniProt:
A0A7M7NGQ2
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MAAEFKTAQPVEYYKQFLKEEVRPDGRELGEIRSTILNVGSISTAHGSALVKLGNTTVVC
GIKGEFASPTVEEPKKGYLVPNVDLPPLCSAQFKPGPPSIQAQVTSQLVADTLLSSNLLN
YEDLCIKEGNMVWVLYCDMMCLDYDGNIIDACLIALLAALRNVRLPVVTIDEDTGLAELS
STEDRSLNIVNQFAATTFSVFDDSILLVDPTVEEEDLATGLMTVIVTQDGRLCNIHKPGG
TPLSTDQIQDCIGRAQTRAKEICSLIDDTLDSIER
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgagttcaagaccgcacagcctgttgaatactacaaacagttcttgaaggaa
gaggttagaccagatggaagagagttgggagaaataagatcaacaattctcaatgttgga
tccatcagtactgcacatggctcagcccttgtgaagcttggtaacacaacagtggtgtgt
ggcatcaagggggaatttgcctctccaacagttgaagaacctaaaaaaggatatctagtt
cccaatgtggatctgccaccattatgttcagctcaattcaagcctggtcctccaagcatc
caagcacaggtcacatctcaactggtagctgatactctactcagttccaacctcctgaac
tatgaagacctttgcatcaaagaaggaaatatggtatgggttctctactgtgacatgatg
tgtctagactatgatggtaacatcattgatgcttgtctgattgctcttctagcagctctt
agaaacgtgagattaccggtagttaccatcgatgaagacacaggactagcagagctttca
tccacagaagacagatctttgaacatcgtcaaccagtttgctgccactacattctctgtc
tttgatgattccatccttctggtagaccctacagtagaagaagaggacctagctactgga
ctaatgacagtcatcgtcactcaggatgggaggctatgtaacatacataaaccaggtggg
acacctctatctacagaccagatccaggattgtatcggtcgagcccagaccagagctaag
gagatatgctcactgattgatgatacactagatagcattgagagatga
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