Strongylocentrotus purpuratus (purple sea urchin): 593379
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Entry
593379 CDS
T01019
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03030
DNA replication
spu03410
Base excision repair
spu03420
Nucleotide excision repair
spu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
593379
03410 Base excision repair
593379
03420 Nucleotide excision repair
593379
03430 Mismatch repair
593379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spu03032
]
593379
03400 DNA repair and recombination proteins [BR:
spu03400
]
593379
DNA replication proteins [BR:
spu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
593379
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
593379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
PTCB-BRCT
AAA_22
RuvB_N
BRCT_2
Rad17
AAA_33
RNA_helicase
AAA_16
AAA_5
AAA_17
nSTAND3
AAA_18
AAA_30
AAA_14
AAA_19
Motif
Other DBs
NCBI-GeneID:
593379
NCBI-ProteinID:
XP_030830290
UniProt:
A0A7M7STM8
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MSMDIRSFFGSPGKPAASSSSTKHTNGKGKRKHDEDDGDFAMFEKKQRHSAKPTKMKKSN
IIYDSDSDSDDPKSKKTKTLVKQTESKTSKGPTKLPQPTPEKKKATSAIDFFGNSPVQRS
VKKPARKVQPLTNGGAKKPRLEMEEHDDEDFQATLRMMDQDESPPKEDKPAKGKGLASKL
AAKVKAGSLVPDTPDREKQKERSRYTEPTIQDTPSGSRQQSRISTKEDEKESPTKRVTRS
TPTKPPPAKRAPIKSTTKAKLEITSPPRKKEEAVTSPPGGEGEKRRGSAGYKSYLNREGP
RSLGSREEPKGADGCLSGLTFVLTGVIEYFDKDQIKTMVEQHGGRLTTSVSKKTSHLVIG
REPGESKVAKAQEFRIKQIQEEELYEMIETRPGKGGSKAKGQAPQQQAKKHEETKPERTI
SKPDTPSMKPIPSSKDTAIKKEPSSLPSSSSSSSNVSQSGQSSKPAPGRGQSAAGGGQSL
MWVDKYKPVSTKNIIGQQGDKSNAKKLLNWLRRWNDNNYGSNKEKAKFNRDAGFAFRAAL
LSGPPGVGKTTTATLVCQELGFSFIEQNASDSRGKKSLQGGIAESLDNQSIADMFKKGCG
KKTSEEGHKHCLIMDEVDGVAGNEDRGGIQELIQMIKTTRTPIICICNDRSHPKIRSLVN
YCFDLRFQRPRVPQIKSAMMSIAYKEGLTVPPAALDGMIMAANQDVRQVLHNLSMWSAGQ
KKMNAEQMNTDARNAKKDLKLGPWDVARQVFSSKDLKTMSFNDKMDLFFHDYSIAGLFVQ
ENYLHVIPDEGRGDIKKQLDLVSKAADSMCQSDLVEKAIRTRNCWRLLPTQAVFASVIPG
TTMQGYMGGMINFPSWLGKNSTRGKNFRLLQELQVHMRKSTSASIRSLNQEYLPRLRKFL
TQPMVEREADGVPDTVNLMHSYDLLREDFDSLLEVTQYSGFNAPMGKVAPKVKAAFTRLY
NKEAHATPYAVDAGGKKKKGKGGGGAAGVEDGLMKVEGEEDEGTQQDEEGSDEDDDVSAL
RAKPKAAGAKGRGGGSKGKAPAKGKAPVKGKAPAKGKGRGRSK
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggacattagatccttttttggcagcccgggtaagccggctgcatcctccagt
tcaaccaaacacactaatggcaaaggaaagagaaaacacgatgaagatgatggagacttt
gccatgttcgagaagaagcagcgccactctgccaaaccgacgaagatgaagaaatccaac
atcatttatgattctgactcagactcagatgatcccaaatccaagaagaccaagaccctt
gtgaagcagaccgagtccaagaccagtaagggaccaaccaagctgcctcagccgacgcca
gagaagaagaaagccacctcggcgattgatttctttgggaactctccggtacagaggtct
gtgaagaaacctgctagaaaggtacagccgctcaccaatggaggagccaagaaacctcgg
ctggagatggaggagcatgatgatgaggatttccaagccacccttcgcatgatggaccaa
gatgagtcacctccaaaagaagacaaaccagctaagggcaaaggacttgcgagcaaattg
gcagccaaggtgaaggcgggtagccttgttccggacacaccggacagagagaagcagaag
gagaggtctagatatacggaacctaccatccaggataccccttcaggcagcagacaacag
agtagaatttcaacaaaagaagatgagaaagaaagtccaacaaagagagtgacccgatcc
acccccaccaagcccccaccagccaaacgtgcacccataaagtccaccaccaaggccaaa
ctagagatcacatcccctcccaggaagaaggaagaggctgtgaccagcccccctggtggg
gagggggagaagaggaggggtagtgcaggctataagagctacttgaatcgggaagggcca
agatcattgggctcgagagaagaaccaaagggtgctgatggctgtctgtctggtttaacc
ttcgtgctcactggagttatagagtactttgacaaagatcagatcaagacaatggttgag
cagcacggcggtcgactcactactagcgtcagcaaaaagacatcgcatcttgtgattggt
cgagaacctggcgagtctaaagtggcaaaggcacaagagtttagaatcaaacagatccag
gaggaagaactctatgaaatgatagaaaccagaccagggaaaggagggtcaaaggccaaa
ggtcaagcacctcagcagcaggcgaagaagcatgaggaaacaaagccggagaggacaata
tcaaaaccagacacaccaagtatgaaaccaatcccatcctcaaaagatacagcaataaag
aaggaaccgtcatctctcccatcatcatcatcatcatcatcgaatgtcagtcaatcaggt
caaagttcaaagcctgcaccagggagaggccagtctgcagcagggggaggccaaagcctg
atgtgggtggataagtataaaccagtcagcacaaagaacatcatcgggcagcagggagat
aagagcaacgccaagaaactactcaactggctcaggaggtggaacgacaacaactacggg
agcaacaaagaaaaagctaaattcaacagggatgcgggttttgcattcagagcagctctc
ctctctgggccccctggtgtaggcaagacaacaacagccactctggtttgccaggaactt
ggcttttccttcattgaacaaaatgcaagtgattctagagggaaaaagagcctgcagggt
ggtattgcagaatcgctcgacaaccaatctattgccgacatgttcaagaagggctgtgga
aagaagacttcagaagagggtcacaagcattgtctgattatggacgaagtggatggtgta
gcagggaatgaagatagaggaggaattcaggagctcatccagatgatcaagactacgaga
acaccaatcatctgtatctgcaatgatcgaagtcatcccaagatcagatctctagtaaac
tactgctttgatctgagattccaaagaccaagggttcctcagataaagtctgccatgatg
tccatcgcttacaaagaaggtctgaccgttcctcctgccgctctagacggcatgatcatg
gctgctaaccaggatgtcagacaggttttgcacaacctgagtatgtggagtgcaggtcag
aagaagatgaacgctgaacagatgaacacagatgcaaggaatgcaaagaaagatctaaaa
ctgggcccttgggatgtagccaggcaagtcttctcttccaaagacctcaagacgatgagc
ttcaacgataagatggacttgttcttccacgactactccattgcagggctctttgtgcaa
gagaactatcttcatgtcataccagatgaaggaagaggagacatcaaaaagcaattagac
ttggtgagtaaagcagctgacagcatgtgccaaagtgaccttgtggagaaagccatcagg
acaagaaactgttggagattgctaccaacacaggctgtatttgccagtgtgatcccaggc
acgactatgcaaggctacatgggaggcatgatcaacttcccgagctggcttggaaagaac
tcgacaagagggaagaacttcagactcttacaagaattgcaagttcacatgagaaaaagc
acatcggcttcaattcgaagcctgaaccaggagtacctgcctcgccttcgaaagttcctg
acgcaaccgatggtagagagggaggcagacggggtgccggataccgtcaacctgatgcat
agctatgatctactgagggaggactttgacagcttgttggaagtgacgcaatactctggt
ttcaatgccccgatgggcaaagtggctcctaaggtaaaagctgccttcaccagactgtac
aacaaggaggcacatgcgaccccctacgcggtggacgcggggggtaagaagaagaaagga
aagggcggaggaggggcggcaggggtagaagatggtctcatgaaagtggaaggagaggag
gacgaaggaacacaacaggatgaagaaggtagcgacgaggatgatgacgtcagtgcattg
agggccaagccaaaagctgcaggggccaaaggtcgcggcggagggtcaaagggcaaagct
cctgccaaagggaaagccccagtcaaagggaaagcaccagccaaggggaaaggaagaggc
agatcaaagtga
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