Strongylocentrotus purpuratus (purple sea urchin): 593513
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Entry
593513 CDS
T01019
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
593513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spu04131
]
593513
Membrane trafficking [BR:
spu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
593513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_VPS8_2
TPR_Vps41
WD40_CDC20-Fz
zf-RING_Vps41
zf_RING_Vps8_fungal
Beta-prop_NWD2_C
EIF3I
PIN-like_DDX60
zf-RING_11
zf-C3H2C3
zf-rbx1
zf-RING_5
Beta-prop_EML
WD40_Prp19
PHD_NSD
PHD
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
593513
NCBI-ProteinID:
XP_030829831
UniProt:
A0A7M7N478
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MEDSGDEVEAAVAATDILDYTLDDFTIDDSEFDIPEVDSAPSLESILNEPEESFEPDNHS
LSFFSVGPDNSDSVSLSETPATPDKSPTANQKKNIQYEAHGSILRHVLLRGIASQVSSAA
DRVDAGKPTAIAISVQIAVGTSHGLILVFDPKQVLRWCLGSTAVGAQYGAVSALSINNDC
TRLLAGFAKGQMTMWDLTSGKLLRTITDAHPPGSAVLHIQFTDDPTLAICSDSGGSVFEL
SMKRVMGMRTCESRCLFSGSRGEVCTLAPLRMDTTITSHPLKDFSLLAMATLSKVFIVGL
RPRLTVMFTKQLRGDPSTLPLLAWQFVIIQVTDTAKVVDPVLACARTNTINFYQVLYQED
GNKVKFAPLQSIILSYSLLNVQWMNAKTLVTVDTTEKLHVIDVKTEEELEVIDLGDVELV
YGSSHFKSLATGGNVSKALALAGERACYQSIATNKGQLIILGTKSIHVMSIRTWQQRLEV
LLKAGKYKDCLRLASSYYNGKAKAVIGLVKKQPQRQAAVADKILEILFDFVEISMKQGPE
RGAIHLLEEHFQRVVPVCVEHCLMLGRKDVLFGSIYEQFRHDIIAKGVYLQCLEPYILND
RLTSVTPEVMKDFIEHYRQKELISNVEACIVHMDIASLDIHQVVSLCWAYGLYDAIIYVY
NKGMNDYVTPLEELLQLLRAAVRATSQLSDNQIRLGNKLLVYISCCLAGRAYPMGDIPPH
LVKDVKQGVWRCLTALHTTDPSPDEPTYPNLRTLLTFDTREFLNVMSLAFEEPEFDAPQE
ANSMQSRQRIVDILLQVMVESVGFSPAQVGCLFTFLARQMAKHENTIYVNRMLFEQVLEF
LSNPSGETRHEEREQALLELLNAGDLLQVDHERLLQLAEGAKFYRVCEVLYERRREFDKI
LLCYLRDSSRKSSVFSYIHQVMIESYYTEPEKDAVQKQAIKHLQDLVAIDSKETAQLVLK
VFAHSLSDVVIQLQNQPQLQYEFLEGVFDGRDTGSALYGREEAQPDCVLHEKFLDLMCTF
SPKKVLNFVMMSENYRLEEALHIVRKHKMSEPTAFLLEKSGDIQGAFGILMENLQTKVKG
LSDAVKGQDGNQNDGMDITLCLSNVQVVLMVLVQLCQRNSPKLDEEGRETLWFPLLDLMM
TTQRRLKPSFNETQFESFKEVTRHVLNSMMGHLSLPRILQKIMQDPTYSTGRFGEIRELI
VGMLDTYTYESTLLKTANRLLDRDLYGSVKNLTMAANRGLMPRRECCMMCGKNYAHSTES
DNILIFSCGHTYHTTCLQTAGCSALIDGQRHWTCLQCYSARRGAALTPNRRPRLFSSGEE
PKRGGGPTSPRGGAAGGSKDTADEDVSLNPEQEASLENLKKWTEGPSRLAILSEVLMSQR
AHPTSKGLVKPNSILHQESFRLQLAPPPSDE
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggaagattctggagatgaggtcgaggcagcagtagcagctacagatatactggactat
actttggatgacttcacaattgatgacagtgaatttgacattcctgaagtagattcagct
ccaagtcttgaaagtattctgaatgagcctgaggaatcttttgaacctgataatcattca
ttgagtttcttctctgttggccctgataacagtgatagtgtctctctatctgaaacacca
gcaactcctgacaaatccccaactgctaaccagaagaagaatattcagtacgaggcgcac
ggttcgatcctaaggcatgtgttgttgagaggcattgcatcccaagtttcatcagcagct
gatcgtgtcgatgctggtaaaccaacagccattgctatctctgtccagattgctgtagga
acatcacatggtcttatccttgtatttgatcccaagcaggttctacgttggtgtctagga
agcacagctgtaggtgctcagtacggagctgtatcagctctaagtatcaacaatgattgt
acaaggttactggctggcttcgcaaagggacagatgacaatgtgggaccttacctcaggg
aagctcttacgaacaatcacagacgcccacccacctggttcagcagtgctacatattcaa
ttcacagatgatcccaccttagctatatgcagtgactccggaggatcagtttttgagctc
agcatgaagagagtcatgggaatgagaacatgcgagtccagatgcctgttttcaggaagc
cgaggtgaagtatgcaccttagccccactcagaatggataccaccatcaccagccatcct
ctcaaagatttctcacttcttgccatggcaaccctctccaaggtattcatcgttggactg
agaccaaggttgactgttatgttcacaaaacaactcagaggtgatccttcaactttgccc
ctccttgcctggcagtttgtcatcatccaggtcactgacaccgctaaggtcgttgaccct
gtccttgcctgtgctcgaacaaacaccatcaacttctatcaggtgctatatcaagaagat
ggtaacaaggtgaagtttgctccactccagagcatcattctatcctacagccttcttaat
gtccagtggatgaatgcaaagactctagtgacggtggatacgaccgagaagcttcatgtc
atcgatgtcaagacagaagaggaattggaggtcatcgatctcggagatgttgagcttgtc
tacgggagcagtcacttcaagagcctcgctacaggaggcaatgtcagcaaagcattggca
ttggctggagaaagggcatgttaccagtctattgctaccaacaagggacagcttatcata
ctcggcaccaagtctattcatgtgatgagcatcaggacatggcaacagcgactggaagtt
ttgttgaaagccgggaagtataaggactgtctaagactggctagttcttattacaacgga
aaagcaaaggctgtcataggtctagttaagaagcagccccagagacaggcagctgttgct
gacaagattcttgagattctgtttgactttgttgagatctcgatgaagcagggcccagag
aggggagcaatccacctcttagaggaacactttcaaagagttgtaccagtatgtgtggaa
cattgccttatgctgggtagaaaggatgttttgtttggatcaatctacgagcaattcaga
catgacatcatcgccaagggggtttacctacaatgtcttgagccttacatcctcaatgac
cgtttgacctctgtgacccctgaggtcatgaaagatttcatcgagcactatcgtcagaag
gagctcatttccaatgtagaggcttgtatagtgcatatggacattgcaagcttagatatt
catcaggtcgtatcgctttgctgggcgtatggtttatatgacgccatcatctacgtgtac
aacaaagggatgaatgattacgtgacccctctagaagagcttcttcagctgcttagagct
gctgtcagagccaccagtcaactctcagacaaccaaattagactaggaaacaagctcctt
gtatatatcagttgttgccttgctggcagggcataccctatgggtgatataccacctcat
ctagtcaaagatgtcaaacaaggggtttggagatgtctgacagctctgcacacgacagac
ccatcccctgatgaacctacctatcctaaccttcgaaccctcctgacctttgacaccagg
gagttcctcaacgtcatgtccctagcgttcgaggagccagagttcgatgcacctcaagaa
gcaaattcgatgcaatcccgccaaagaatagtagacattctactacaggtcatggtagaa
agtgttggcttctcgcctgctcaggttggctgtctcttcaccttcttagcacgtcagatg
gctaaacatgaaaacacaatctatgtcaatagaatgctcttcgaacaggtattggagttc
ctgtccaacccttctggcgaaacaaggcatgaagagagggagcaagctctgctggagctt
cttaatgcaggagacctactccaggtggatcatgaaagactcctccagctcgcagaggga
gccaaattctaccgagtctgtgaagtcttgtatgaaagaagaagagagtttgataagatc
cttctctgctatctaagagattcatcaagaaagtcctcagtattctcctacattcaccaa
gtgatgattgagagctactacacagagccagagaaagatgccgtccagaaacaggcaatc
aaacatcttcaggatcttgttgccatagacagcaaggaaaccgcccagctggtcttgaaa
gtctttgctcattctttgagtgatgttgtcatacaactacagaaccaaccacagctgcag
tatgagttccttgaaggtgtgtttgatggcagagatacaggtagcgccctctatggacgg
gaagaggcacagccagactgcgttcttcatgagaagttcctagatctgatgtgtacattc
agtcctaagaaggtccttaactttgtcatgatgtctgagaactacagactggaagaagca
cttcatattgtccgtaagcacaagatgtccgaacccactgccttcttgctggagaaatct
ggagacatacaaggagcctttgggatcctgatggagaacctacaaaccaaggtcaaaggt
ctctcggatgcggtcaaaggtcaagatggaaatcagaatgatggaatggatattaccttg
tgtctatccaatgtgcaagtagttctgatggttcttgttcagctgtgtcaaaggaactca
ccaaagcttgatgaagagggaagagagactttatggtttcctctcttggaccttatgatg
acaacacaaagaagactcaaaccctccttcaatgaaacccagtttgaaagtttcaaggaa
gttacaaggcatgtattgaacagcatgatgggacatctctcattacctagaatccttcag
aaaattatgcaggatccaacgtacagcacaggcaggtttggggagatccgagagctgatt
gttgggatgttggacacatacacatatgaatcaaccctgctcaagactgccaatagatta
ctagacagagatctctacggctcagtcaagaacctgaccatggctgccaatagagggctc
atgcctcgtagggaatgctgcatgatgtgtggaaagaattatgcacattcaaccgagtcg
gataacattctaatcttcagttgtggccacacctaccacaccacatgcctgcagacggct
ggctgctcagctctcatagacggtcagagacactggacatgcttacaatgctactcagct
aggagaggggcggcacttacacctaacaggagaccacgcctcttcagctcaggggaggag
cctaagagaggaggagggccgacgtcgccaaggggtggagctgcaggagggtctaaggat
actgctgatgaggatgtatcattgaatccagagcaagaagcatctcttgaaaatctcaag
aaatggacggaaggcccctccaggttggccatcttgagtgaagttttgatgtcgcagcga
gcccatcctacttcaaagggccttgtgaaaccaaatagtattctacatcaagagagtttc
agacttcaactagcccctccccctagtgatgaatga
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integrated database retrieval system
