Strongylocentrotus purpuratus (purple sea urchin): 594232
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Entry
594232 CDS
T01019
Name
(RefSeq) E3 ubiquitin-protein ligase listerin isoform X1
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spu03009
]
594232
04121 Ubiquitin system [BR:
spu04121
]
594232
Enzymes [BR:
spu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
594232
Ribosome biogenesis [BR:
spu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
594232
Ubiquitin system [BR:
spu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
594232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
HEAT_GCN1
zf-RING_2
zf-ANAPC11
FANCL_C
zf-rbx1
zf-RING-like
RINGv
DUF5308
Motif
Other DBs
NCBI-GeneID:
594232
NCBI-ProteinID:
XP_030851162
UniProt:
A0A7M7PHG9
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MSKKQKQRTKGNVRPSSSGRAAELLAREGGGHVGFVGFGSMSGDLGYVPTSVGFEDQDAG
LDADFRMVLRKLSKKDVVTKLKAIQEFQGLCTEKEEEDIVSLLPHWPRLYNRLSMDHDKR
VREATQQMFIKVVSRVKRNLAPHLKAIMGCWLMAQNDPYAPAGSGAKVAFRKAFTSQDKQ
GNAVAFCKGEVLQLYKDNLFKETAETLSDPKSFSKEEQVEKYLRVVSSSLLALREFINLL
PEGQLEGSKEELNTILSEDRLWKFVKNQSPEIRGAMYSLLGTLCKVMPSILTPYLPKLCP
ALLASMDETEPLTVGPLWEGILRLISCDLDCWKHVNMRKAVLPKLWSVLRNGGNGCASTI
YPHLLPLLSHLPPEVKSQDEAFCREFFNNFREGLSCKRVSQSISENTAILKSFMECLRYS
IAQSLSSENASVHTHLLDQQLMPLLKSSLTEEGKTWSVVTLYQQTGALLNYLYKQKVGDE
KGSPARQVLETLWSGISAMCVDHVTSALTNQEAGLNNTALLVAVLKNPNAVEVKKMGASK
RRIKGARIRFAVEEEEGGGEIEKQEPSGSNGDDRLGKPQTNNGQSKIEGVESSTEPSIQH
PQLPSLVSDLVQSSFHQARDSLPHLHFLAQLVRTFSDRTTIRTMLKAADVNAACPTRTGS
DLICIDAASKVDGEDEDAIRTSGDVKNIQDSEKVAGGSGIDKLDARVEKKEEEEKEEDIG
SDDDLLPLKCIYSFLLPWLLDVEKDRDARKQEKVLRMEAILDMTVSVLLTVQEENRILVV
DAVCLKAETLQLLHLTISKMRDKPELSSTMDTWLQSELFGEKLLSIQDELCRLTLEGQLE
QSSVGWKLISLALSSGKHDEPLIGTTYAELLLVGFYHALTRPDAVTTATQCISFICDVTS
NFFSAVKGCIHLSSSTDLLLAIFQLECRDAQNLSGSLKEKVRQTWAQGVQSLVKQTGGLL
TDQGLLVKTTQWIKQTLNEKEGNIHQFEQLGLTASAFLAAILDGLPGNHDDSDQDVMKTL
LESLLPSENEWGSHRLELANQWISSAVIGQQMTQCDPPPLTPTDTTHAPQALKLALFVST
LTSDLNKKVQTIGASSGEEHGQEDGEEGEVISMETSGLPWECDALQSAIVEVMYMREWCQ
AITGIEAAPLKLAAGTAVITSPPDYCLQFPQTFSQATEDIWGHLTPPLWQELFGIVFDRS
LKSGGLWSYVLDRFIDINFKHNDEKARINIWQPMDSPNEPWLEICSVEMLQTVERLVPHF
SDRQCQDLAGCHAGMLVSCEGDWITSLCGGLTNLTVLVRCITMNRPGPGALPDLALSTLR
QLQHWREKSNSVFLFSGEELEGASSEQLCLNIKMVQLVTCVVEKIPEELESHDWDFILCS
LVSWVQACSDNMASIKSSSILASTLCAATSDLLSSTSRLFGQSERSVKLPSSLLTEWNEF
FSDGAYSVFLPAFMRFIEEESLWSAAGVDLTPLLYALCEAAAYTPTEQLKGHCLPPKLQP
GSTRHVPDPLHSLLNHLVALLTKPYRPVQTAAFNMLQRVMPEFARYDEEYLQVKNKTQAD
DEDEAPSILPPTGLQKLLDSSTAFMEALLHDIPVGECTVVETGSEAYMQTCSYLLAWRLY
LTIFRAASMEVRAQYSSYLKQTKGIHSLLESLFCLMPEDPTLERSATPSKGSQVTMFSKH
PDLSPKAASHVEVNEVQHLACSVYFSILQDVPAIARQWWTLQDRRIAPYVDRFTTKYISP
LLCAEEMRSVQENPSTAENMTVKARLSTREVIATYSMQELNIEMMITLPANHPLGPIEVD
NRRKVAVGTSQWRQWTLMLTTFLTHQNGSIMEGLNLWRSNADKRFEGIEDCMICFSVIHG
GNCSLPKLMCKTCKKRFHSACLYKWFSTSAQSSCPLCRSPF
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaagcagaaacagaggactaaaggcaacgttcggccctcaagcagtggcaga
gccgctgagctgttggccagagagggtggtggtcatgtcggatttgttggctttggatcg
atgtcaggtgacctgggatatgtaccaactagtgtgggatttgaggaccaggatgcaggc
ctagatgcagacttcaggatggtgcttcgtaaactcagcaagaaagatgtagtcaccaaa
ctcaaggcaattcaagaattccaaggtctgtgcactgagaaggaagaagaagacattgtt
tccttgcttccacactggccaaggctctacaatagactctcaatggaccatgacaagcga
gttagggaagccacccagcagatgtttatcaaggtggtcagtcgggtcaagcgcaacctt
gccccccatctcaaggcgatcatgggatgctggttgatggcccagaatgacccttacgcc
cctgcagggtctggggcaaaggttgcattcaggaaggccttcacctcccaggataaacag
ggcaatgcagtggccttctgcaagggagaagtgctacagctttacaaagacaatctgttc
aaggaaactgctgagacgctcagtgatccaaagtcattttctaaagaggaacaagttgag
aagtatttgcgagtggtgagctcgtctctgcttgctctcagagagttcatcaatctctta
ccagagggacagctggaaggaagcaaggaagaactgaacaccattctttctgaagacaga
ctgtggaaatttgttaagaatcaatctccagagatccgtggtgccatgtacagcctgcta
ggaaccctatgcaaggtgatgccttcgatcctgaccccctaccttcctaagctgtgccct
gccctgctggcgagtatggatgagactgaacctttgactgttggtcctctctgggaaggc
atccttagactcatctcttgtgacctggattgttggaagcatgtgaacatgaggaaggca
gtccttccaaagctctggtccgtcctgcgtaacgggggaaacgggtgcgcctccaccatc
tacccccacctcctccccctcctcagccatctgcctccggaggtcaaaagtcaagacgag
gccttctgccgggaattcttcaacaacttcagagaaggacttagctgcaagcgtgttagt
cagagcatcagtgagaacacagccatcttgaagtcattcatggagtgtcttagatacagc
attgctcagagtctctccagtgagaatgcatctgttcacactcatctccttgatcaacag
ctgatgcctctactgaaatcctctctgactgaagagggcaagacatggagtgtggtgacc
ctttatcagcagactggggccttgctaaactacctgtataagcagaaggttggtgatgag
aaaggatcaccagctcgacaggttttggagactctgtggtcaggcatctctgccatgtgt
gtggatcatgtgacatcagcattgaccaatcaggaggcaggattgaataatactgcgctt
cttgttgctgtgctgaagaaccctaatgccgttgaggtaaagaagatgggagccagtaag
aggaggatcaagggagcaaggatcaggtttgctgtggaggaggaggaaggaggaggtgaa
atagaaaagcaggaaccctcagggagcaatggagatgatagactaggcaaaccacaaaca
aacaatggtcagtcaaaaatagaaggtgtagaatctagtactgaaccatccatccaacat
cctcagcttccatccctcgtctcggacctcgtccagtcatcattccaccaagcgagggac
tcactacctcatcttcactttctagcccaactcgtcagaactttttccgatcggaccacc
atccgaaccatgctcaaagcagctgatgtgaacgctgcctgtcctactcgtacagggagt
gacctcatttgcatagatgcagcatcaaaggtcgatggagaagatgaagatgcaattagg
actagtggagatgtaaagaatattcaggatagtgagaaagtagctggaggatctgggata
gataaactggatgcaagggtggagaagaaagaggaggaagaaaaggaggaggatatcggc
tctgatgatgatctccttcccttgaaatgcatctattcattcctattaccatggttacta
gatgttgagaaggacagagatgctagaaagcaggagaaggtgttacgaatggaagccatt
ctggacatgaccgtgtctgttcttctgaccgtccaagaggagaatcgaatcctggtcgtt
gatgctgtgtgcctcaaagctgagacactgcaacttctccatctgacgatatccaagatg
agagataaacccgagctttcctcaacgatggacacctggctccagtctgagctgtttggt
gagaagctcctctccatccaagatgaactctgccgtctcacccttgaaggacagctggaa
cagagctctgtgggatggaagctcatctctctggccctgtcctccgggaaacatgacgaa
cctctgattggcaccacctatgccgagctgctccttgtaggattctaccatgctcttact
agaccggatgctgtcaccacggcaacccagtgcatcagtttcatatgtgatgtcacttcc
aacttcttttctgctgttaagggttgcattcatctctcatcatctactgatctcctcttg
gccatcttccaactggaatgcagagatgcccaaaatctctcaggttcattgaaggagaaa
gtccgtcaaacttgggctcaaggagtgcagtctttagtgaagcagactggtggtttgctc
actgatcaaggtctgcttgttaagactactcagtggatcaaacaaacattgaatgagaaa
gaagggaacatacaccagtttgagcagttgggtttaaccgcgagtgcctttttggcagcc
atcttggatgggttgcctggcaatcatgatgacagtgatcaggatgtaatgaagactcta
ttggaatctctgcttccatctgaaaatgagtggggtagtcacagactggagctggctaat
cagtggatatcctctgcagtaattggtcagcaaatgacccagtgtgaccctccacctctg
accccgactgacacgacccatgcaccacaggcacttaagctagctctgtttgtcagcact
ctcacatcagatctcaacaaaaaagttcaaacaatcggtgcatcttcaggagaagagcat
gggcaggaggacggggaagagggcgaggtcatctccatggaaaccagtgggttgccatgg
gaatgtgatgccttgcagtctgccatcgttgaagtcatgtacatgagagagtggtgtcaa
gctataaccggaatcgaggcagctccactgaagctggcagctggtacggcagtcattacc
tcaccacctgactactgtctacagtttccacagaccttcagtcaggcaacagaggacata
tggggtcacctgacacctcctttatggcaggagctgtttggcattgtatttgataggtct
ctgaagtcgggtggcctgtggtcttatgttctcgaccgtttcatcgatatcaacttcaaa
cacaatgacgagaaggcaaggattaatatatggcagcccatggactcgcccaatgagcca
tggcttgagatctgcagtgtggagatgctacagactgttgaaagactggtgccacatttc
agtgacagacagtgccaggaccttgctggatgccatgctggtatgctggtgtcgtgtgaa
ggagattggatcaccagtctgtgtggaggactcactaacctgacagtgctagtcaggtgt
atcaccatgaatcgtcctggtcctggtgccctgcctgacctagccttgagtaccctgaga
cagctgcaacactggagagagaaatccaactcggtcttccttttcagtggggaagagttg
gaaggggcctcctcagaacaactctgtctcaacatcaagatggtgcagctagtgacatgt
gttgttgagaagatccctgaagagttggagtcacatgactgggatttcatcctgtgttct
ctggtttcatgggttcaggcatgtagtgataacatggccagcataaaatcgtcgtccatt
cttgcttcgaccctttgtgccgcgacctctgacctcttgtccagcacgtctagactcttt
ggacagtccgagagatcggtcaagctgccttctagtctattgacggagtggaacgagttc
ttcagtgatggagcgtacagtgtcttcctgcctgcctttatgcggttcatagaggaagag
agcttgtggagtgcagctggggtagacctgacacccctcctctatgccctgtgcgaggcc
gcggcttacacccccaccgagcagctgaaggggcattgcctccctcccaaactccaaccg
gggagcaccaggcacgtccccgacccccttcacagtcttctcaaccacctggtggctctc
ctcaccaaaccctacaggccggtccagacggctgcattcaacatgctacagagggtgatg
ccagagtttgcaaggtacgatgaagaatatcttcaggtgaagaataaaacacaagcagat
gatgaagatgaagcaccaagcatcttgcctccaactggtcttcagaagctgctagactcc
tccacagcctttatggaagctcttctgcatgacatacctgtaggcgaatgcaccgttgta
gagactggtagcgaagcctacatgcagacatgctcataccttctggcgtggaggctttac
ttgacaattttcagagctgccagcatggaggtcagagcgcagtattcatcctacctcaaa
cagacaaagggaatccattccttattagagagcctcttctgcctcatgcctgaagatccg
accttagagaggtcagcgacccccagcaaggggtcacaggtcaccatgttcagcaagcat
ccagacttgagccctaaagcagcatcccatgtggaggtcaacgaggtgcagcatctggcc
tgctcggtctatttcagcatcctccaagatgtaccagccatcgctagacagtggtggacg
ttacaggacaggagaatagcgccatatgtggacaggttcacaaccaaatacatcagcccc
ctgctgtgcgcggaggagatgcgctccgtccaggagaaccccagcacggccgagaacatg
acggtcaaggcccgtctgtccacccgggaggtcatcgctacctactccatgcaagagctc
aacattgagatgatgatcaccctcccggccaaccatcccttgggacccattgaggtggac
aaccgacgcaaagtagccgtagggacgtcgcagtggcgtcagtggacgctgatgctgacc
acgttcttgacccatcagaatgggtctataatggaggggttgaacttgtggcgaagcaat
gcagataaacgttttgagggtattgaagactgcatgatctgtttctctgtgatacatgga
ggaaactgctctctcccaaagcttatgtgcaagacatgcaagaagcgcttccactcagca
tgtttgtacaaatggttcagtactagtgcacagtcttcctgccctctctgcagaagtcca
ttctga
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integrated database retrieval system
